BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00010327
         (3095 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010265125.1 PREDICTED: CRM-domain containing factor CFM3, chl...   994   0.0  
XP_018830123.1 PREDICTED: CRM-domain containing factor CFM3, chl...   975   0.0  
XP_007036533.2 PREDICTED: CRM-domain containing factor CFM3, chl...   957   0.0  
EOY21034.1 CRS1 / YhbY domain-containing protein [Theobroma cacao]    956   0.0  
XP_007211308.1 hypothetical protein PRUPE_ppa001468mg [Prunus pe...   949   0.0  
XP_008240263.1 PREDICTED: CRM-domain containing factor CFM3, chl...   946   0.0  
XP_010094746.1 Chloroplastic group IIA intron splicing facilitat...   944   0.0  
XP_010045645.1 PREDICTED: CRM-domain containing factor CFM3, chl...   936   0.0  
OMO96033.1 hypothetical protein CCACVL1_05105 [Corchorus capsula...   935   0.0  
XP_009360154.1 PREDICTED: CRM-domain containing factor CFM3, chl...   934   0.0  
XP_009347186.1 PREDICTED: CRM-domain containing factor CFM3, chl...   931   0.0  
XP_008374754.1 PREDICTED: CRM-domain containing factor CFM3, chl...   931   0.0  
KCW83864.1 hypothetical protein EUGRSUZ_B00725 [Eucalyptus grandis]   930   0.0  
XP_016718281.1 PREDICTED: CRM-domain containing factor CFM3, chl...   927   0.0  
XP_012093011.1 PREDICTED: chloroplastic group IIA intron splicin...   927   0.0  
XP_012440292.1 PREDICTED: chloroplastic group IIA intron splicin...   927   0.0  
XP_012440291.1 PREDICTED: chloroplastic group IIA intron splicin...   927   0.0  
XP_017637137.1 PREDICTED: CRM-domain containing factor CFM3, chl...   926   0.0  
XP_008393315.1 PREDICTED: CRM-domain containing factor CFM3, chl...   922   0.0  
XP_012440290.1 PREDICTED: chloroplastic group IIA intron splicin...   920   0.0  

>XP_010265125.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 838

 Score =  994 bits (2571), Expect = 0.0
 Identities = 540/773 (69%), Positives = 583/773 (75%), Gaps = 15/773 (1%)
 Frame = +3

Query: 318  WLQKWSPSKP----------DPKIHSQNAPPETRYFDTDKGRSAIERIVHRLRXXXXXXX 467
            WL KW    P            K      P E+RYFD DKGRSAIERI HRLR       
Sbjct: 91   WLNKWPSVNPPIGAVNRIADSEKQRKVEDPVESRYFDGDKGRSAIERIAHRLRNLGLGSD 150

Query: 468  XXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSERDET---LLPWERG- 635
                               P +GEEKLGDLL+R+W+RPD+I+  + DE    LLPWER  
Sbjct: 151  DEDEEVGGESNEEM-----PLSGEEKLGDLLKRTWSRPDSILHEDEDEKGKMLLPWERDE 205

Query: 636  DDGSREVDERGVRKK-RAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLE 812
            DD S E D RG++KK R KAPTLAELTIED+ELRRLR  GM LRERV++ KAGVTQ +LE
Sbjct: 206  DDQSEEEDGRGLKKKKRVKAPTLAELTIEDAELRRLRTLGMTLRERVNIPKAGVTQVILE 265

Query: 813  KIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXX 992
            KIH+ WRKSELVRLKFHE+LAHDM+TA EIVERRTGGLV WRSGS+MVVYRGSNYE    
Sbjct: 266  KIHEKWRKSELVRLKFHETLAHDMKTALEIVERRTGGLVIWRSGSIMVVYRGSNYEPFSR 325

Query: 993  XXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERM 1172
                   +S  N L  PD                     I S  EK +P V +P  AE M
Sbjct: 326  LKT---VESEGNALFVPDVSSSANSISKINND-------IMSAPEKKDPGVQNPNQAESM 375

Query: 1173 TEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAE 1352
            TE+EAEYNSLLDGLGPRFVDWWGTG LPVDADLLPQ IP YKTPFRLLPTGMRPRLTNAE
Sbjct: 376  TEEEAEYNSLLDGLGPRFVDWWGTGILPVDADLLPQTIPSYKTPFRLLPTGMRPRLTNAE 435

Query: 1353 MTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEL 1532
            MT+LRKLA+SLPCHFALGRNRNHQGLAAAIVKLW+KSLV KIAVKRGIQNTNNKLMAEEL
Sbjct: 436  MTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVAKIAVKRGIQNTNNKLMAEEL 495

Query: 1533 KMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSA 1712
            K LTGG+LLLRNKYYIVIYRGKDFLPTSVA ALAERQELTK+IQDVEE+AR+G       
Sbjct: 496  KKLTGGVLLLRNKYYIVIYRGKDFLPTSVAFALAERQELTKEIQDVEEKARSGA------ 549

Query: 1713 VAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTE 1892
                                     V +AH     GQA AGTL+E+ EAQARWGRE+S E
Sbjct: 550  -------------------------VVSAHVEEIGGQALAGTLSEYREAQARWGREISAE 584

Query: 1893 EHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITD 2072
            EHEKMKEEASRAK AK VKRIEHKL VAQAKKLRAEKLL+KIE SMVPVGPSDDQETITD
Sbjct: 585  EHEKMKEEASRAKNAKAVKRIEHKLTVAQAKKLRAEKLLAKIEKSMVPVGPSDDQETITD 644

Query: 2073 EERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARL 2252
            EERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+FVEDTARL
Sbjct: 645  EERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFVEDTARL 704

Query: 2253 LEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALS 2432
            LEYES GILVAIERVPKGYALIYYRGKNYQRPIS+RPRNLLTKAKALKRSVAMQRHEALS
Sbjct: 705  LEYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRSVAMQRHEALS 764

Query: 2433 QHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDSFM 2591
            QHI+ELE TIEQM+SE+G SKD +  + WS  +  R D  S FT+SEDE S M
Sbjct: 765  QHITELERTIEQMKSEIGMSKDVDYEDTWSEEDPRRFDNVSAFTESEDEGSSM 817


>XP_018830123.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Juglans regia]
          Length = 904

 Score =  975 bits (2520), Expect = 0.0
 Identities = 542/804 (67%), Positives = 595/804 (74%), Gaps = 46/804 (5%)
 Frame = +3

Query: 318  WLQKW-SPSKPDP-----KIHSQNAPP-------ETRYFDTDKGRSAIERIVHRLRXXXX 458
            WL KW +P  P       K +S+N  P       E+RYFD DKG+SAIERIV RLR    
Sbjct: 77   WLNKWPNPGPPVESADRRKSNSRNVSPLNDDDRVESRYFDGDKGQSAIERIVLRLRNLGL 136

Query: 459  XXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVS---SERDETLLPWE 629
                                  P  GEEKLGDLLQR W RPD I++   S  ++T+LPWE
Sbjct: 137  GSDGEDDGSDEMDGGDAM----PVTGEEKLGDLLQRDWVRPDYILAESESGENDTVLPWE 192

Query: 630  RGDDGSREVDERGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVL 809
            R +    E  ER  R+   KAP+LAELTIED ELRRLR  GMVLRER+S+ KAG+T+ VL
Sbjct: 193  RDEVKVEESGERRERRVVVKAPSLAELTIEDQELRRLRGMGMVLRERISIPKAGLTKEVL 252

Query: 810  EKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXX 989
            EKIH  WRK ELVRLKFHE LAHDM+TAHEIVERRTGGLV WRSGSVMVVYRGSNYEG  
Sbjct: 253  EKIHGKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPF 312

Query: 990  XXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAER 1169
                      +Q +    DA FVP            GS V +ST EK  P+V +P     
Sbjct: 313  R---------SQPVNREGDALFVPDVSSMESSMTRTGS-VATSTLEKSVPAVRNPDSPVN 362

Query: 1170 MTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNA 1349
            MTE+E EYNSLLDGLGPRF++WWGTG LPVDADLLPQ +PGYKTPFRLLPTGMR RLTNA
Sbjct: 363  MTEEEVEYNSLLDGLGPRFLEWWGTGVLPVDADLLPQKVPGYKTPFRLLPTGMRLRLTNA 422

Query: 1350 EMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1529
            EMT+LRKLARSLPCHFALGRNRNHQGLA+AI+KLWEKSLVVKIAVKRGIQNTNNKLMAEE
Sbjct: 423  EMTNLRKLARSLPCHFALGRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQNTNNKLMAEE 482

Query: 1530 LKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGL-- 1703
            L+ LTGG+LLLRNKYYIVIYRGKDFLPTSVAAALAERQEL K IQDVEE+ R  VV    
Sbjct: 483  LRNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALAERQELAKQIQDVEEKVRCRVVDTAQ 542

Query: 1704 ----------TSAVAALSERSEWT------EDNV------------DVEERSLRAEVGTA 1799
                      TS  AA++ER E        E+ V            DVEE+   A V  A
Sbjct: 543  SRGEERQVLPTSVAAAVAERQELVKPSQDMEEKVQCEAVDVAQAGEDVEEKVQFAAVDVA 602

Query: 1800 HTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEASRAKTAKVVKRIEHKLAVAQ 1979
                 EGQA AGTLAEF EAQARWGR++S EE  KM EEAS+AK  ++VKRIEHKLAVAQ
Sbjct: 603  QASEDEGQALAGTLAEFYEAQARWGRDISVEERGKMIEEASKAKKTRLVKRIEHKLAVAQ 662

Query: 1980 AKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVI 2159
            AKKLRAEKLL+KIEASM+P GP  DQETITDEER MFRRVGLRMKAYLPLGIRGVFDGVI
Sbjct: 663  AKKLRAEKLLAKIEASMIPAGPDHDQETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVI 722

Query: 2160 ENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGILVAIERVPKGYALIYYRGKNY 2339
            ENMHLHWKHRELVKLISKQKTLAFV++TARLLEYES GILVAIERVPKGYALIYYRGKNY
Sbjct: 723  ENMHLHWKHRELVKLISKQKTLAFVDETARLLEYESGGILVAIERVPKGYALIYYRGKNY 782

Query: 2340 QRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESTIEQMRSELGDSKDSEDGNAW 2519
            QRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISE+E TIEQM+ ELG S+D+ED NA 
Sbjct: 783  QRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISEVERTIEQMKKELGVSQDAEDENAG 842

Query: 2520 SSGEEIRIDGGSQFTQSEDEDSFM 2591
            SS    +ID   + T+SEDE S M
Sbjct: 843  SSEGPNQIDSTPEITRSEDETSCM 866


>XP_007036533.2 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Theobroma cacao]
          Length = 854

 Score =  957 bits (2474), Expect = 0.0
 Identities = 520/764 (68%), Positives = 579/764 (75%), Gaps = 7/764 (0%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQNAPP----ETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +       ETRYFD DK +SAIERIV RLR              
Sbjct: 85   LQAWS--SPSQKVIQSDGDDKTDVETRYFDRDKSQSAIERIVLRLRNLGLGSDDEDEGED 142

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V E 
Sbjct: 143  ETDQYNST----PVTGEERLGDLLKREWVRPDTMLIEREKEEAVLPWERDEAEVEVVKEG 198

Query: 666  --GVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
              GV+K+R +APTLAELTIED ELRRLRR GM LRER++V KAG+TQAVLEKIH  WRK 
Sbjct: 199  VLGVKKRRVRAPTLAELTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKE 258

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSNYEG            
Sbjct: 259  ELVRLKFHEVLATDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGP---------SR 309

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
            +Q+I    +A F+P          G+ +   +ST EK  P V  P  +E MTE+EAEYNS
Sbjct: 310  SQSIDREGEALFIPDVSFASNAVRGSETGT-TSTPEKCEPVVVKPERSESMTEEEAEYNS 368

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDG+GPRFV+WWGTG LPVDADLLPQ IPGYKTPFRLLP GMRPRLTNAEMT+LRKLA+
Sbjct: 369  LLDGVGPRFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAK 428

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKSLVVKIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 429  SLPCHFALGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGVLL 488

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPTSVAAALAERQELTK IQDVEE+ R                  
Sbjct: 489  LRNKYFIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVR------------------ 530

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                        +RA V  A +G  +G+A AGTLAEF EAQA WGRE+S EE EKM EEA
Sbjct: 531  ------------IRA-VEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKMIEEA 577

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK A++VKR+EHKLAVAQAKKLRAE+LL+KIE+SM+P  P  DQETITDEER MFRRV
Sbjct: 578  SKAKHARLVKRVEHKLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVMFRRV 637

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLE+ES GIL
Sbjct: 638  GLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGIL 697

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELE T
Sbjct: 698  VAIERVPKGYALIYYRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELERT 757

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDSFM 2591
            IE+M+ E+G S+D ED ++  SGE  + D  S+ TQSEDE S+M
Sbjct: 758  IEEMKKEIGASQDVEDEDSQVSGEHGQFDPVSELTQSEDEASYM 801


>EOY21034.1 CRS1 / YhbY domain-containing protein [Theobroma cacao]
          Length = 919

 Score =  956 bits (2472), Expect = 0.0
 Identities = 520/764 (68%), Positives = 579/764 (75%), Gaps = 7/764 (0%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQNAPP----ETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +       ETRYFD DK +SAIERIV RLR              
Sbjct: 150  LQAWS--SPSQKVIQSDGDDKTDVETRYFDRDKSQSAIERIVLRLRNLGLGSDDEDEGED 207

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V E 
Sbjct: 208  ETDQYNST----PVTGEERLGDLLKREWVRPDTMLIEREKEEAVLPWERDEAEVEVVKEG 263

Query: 666  --GVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
              GV+K+R +APTLAELTIED ELRRLRR GM LRER++V KAG+TQAVLEKIH  WRK 
Sbjct: 264  VLGVKKRRVRAPTLAELTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKE 323

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSNYEG            
Sbjct: 324  ELVRLKFHEVLATDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGP---------SR 374

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
            +Q+I    +A F+P          G+ +   +ST EK  P V  P  +E MTE+EAEYNS
Sbjct: 375  SQSIDREGEALFIPDVSSASNAVRGSETGK-TSTPEKCEPVVVKPERSESMTEEEAEYNS 433

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDG+GPRFV+WWGTG LPVDADLLPQ IPGYKTPFRLLP GMRPRLTNAEMT+LRKLA+
Sbjct: 434  LLDGVGPRFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAK 493

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKSLVVKIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 494  SLPCHFALGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTNNKLMAEELKNLTGGVLL 553

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPTSVAAALAERQELTK IQDVEE+ R                  
Sbjct: 554  LRNKYFIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVR------------------ 595

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                        +RA V  A +G  +G+A AGTLAEF EAQA WGRE+S EE EKM EEA
Sbjct: 596  ------------IRA-VEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKMIEEA 642

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK A++VKR+EHKLAVAQAKKLRAE+LL+KIE+SM+P  P  DQETITDEER MFRRV
Sbjct: 643  SKAKHARLVKRVEHKLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVMFRRV 702

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLE+ES GIL
Sbjct: 703  GLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGIL 762

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELE T
Sbjct: 763  VAIERVPKGYALIYYRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELERT 822

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDSFM 2591
            IE+M+ E+G S+D ED ++  SGE  + D  S+ TQSEDE S+M
Sbjct: 823  IEEMKKEIGASQDVEDEDSQVSGEHGQFDPVSELTQSEDEASYM 866


>XP_007211308.1 hypothetical protein PRUPE_ppa001468mg [Prunus persica] ONI09173.1
            hypothetical protein PRUPE_5G221800 [Prunus persica]
          Length = 820

 Score =  949 bits (2454), Expect = 0.0
 Identities = 510/775 (65%), Positives = 573/775 (73%), Gaps = 17/775 (2%)
 Frame = +3

Query: 318  WLQKWSP---------SKPDPKIHSQNAPPE------TRYFDTDKGRSAIERIVHRLRXX 452
            WL  W P          K + K++  +   +      TRYFD +KG+SAIERIV RLR  
Sbjct: 71   WLNTWPPRNSPAELPCQKVNEKVNESHGRDQAVKANTTRYFDKNKGQSAIERIVLRLRNL 130

Query: 453  XXXXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSER--DETLLPW 626
                                      +GEEKLGDLLQR W RPD +++ ++  DE  LPW
Sbjct: 131  GLGSDDEEEDDGLGLDGQDSMQPAE-SGEEKLGDLLQREWVRPDYVLAEQKSNDEVALPW 189

Query: 627  ERGDDGSREVDERGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAV 806
            E+ D+ S E + +G+RK+R KAP+LAELTIED EL+RLRR GMVLRER+SV KAG+TQAV
Sbjct: 190  EKEDEISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAV 249

Query: 807  LEKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGX 986
            LEKIH TWRK ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSNY+G 
Sbjct: 250  LEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGP 309

Query: 987  XXXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAE 1166
                       +Q +     A F+P           +G+   S   +    +V  P    
Sbjct: 310  ---------SKSQTVDREGGALFIPDVSSAETSATRSGNDATSGP-DNNEKAVKIPAHLP 359

Query: 1167 RMTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTN 1346
             MTE+EAE+NSLLD LGPRFV+WWGTG LPVDADLLP+ IPGYKTPFRLLPTGMR RLTN
Sbjct: 360  NMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTN 419

Query: 1347 AEMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAE 1526
            AEMT+LRKLA+SLPCHFALGRNRNHQGLA+AI+KLWEKS V KIAVKRGIQNTNNKLMAE
Sbjct: 420  AEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAVKRGIQNTNNKLMAE 479

Query: 1527 ELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLT 1706
            ELK LTGG+LLLRNKYYIV YRGKDFLPTSVAAALAERQELTK +QDVEE+ R       
Sbjct: 480  ELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRI------ 533

Query: 1707 SAVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVS 1886
                                       +  A +G  EGQA AGTLAEF EAQARWGRE+S
Sbjct: 534  -------------------------KAIDAASSGAEEGQALAGTLAEFYEAQARWGREIS 568

Query: 1887 TEEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETI 2066
             EE EKM EE S+AK A++VKRIEHKL VAQAKKLRAEKLLSKIE+SM+P GP  DQET+
Sbjct: 569  AEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYDQETV 628

Query: 2067 TDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTA 2246
            TDEER MFRRVGLRMKAYLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFVEDTA
Sbjct: 629  TDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTA 688

Query: 2247 RLLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEA 2426
            RLLE+ES GILVAIERVPKGYALIYYRGKNYQRPI++RPRNLLTKAKALKRSVA+QRHEA
Sbjct: 689  RLLEFESGGILVAIERVPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAIQRHEA 748

Query: 2427 LSQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDSFM 2591
            LSQHISELE TIEQM SE+G S+D  D + WSS +  +I G S+F QSEDE S M
Sbjct: 749  LSQHISELEKTIEQMSSEIGVSEDIADESTWSSRDPDQIHGASEFVQSEDEASRM 803


>XP_008240263.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Prunus mume]
          Length = 820

 Score =  946 bits (2445), Expect = 0.0
 Identities = 509/775 (65%), Positives = 573/775 (73%), Gaps = 17/775 (2%)
 Frame = +3

Query: 318  WLQKWSP---------SKPDPKIHSQNAPPE------TRYFDTDKGRSAIERIVHRLRXX 452
            WL KW P          K + K++  +   +      TRYFD +KG+SAIERIV RLR  
Sbjct: 71   WLNKWPPRNSSAELPRQKVNEKVNESHGRDQAVKANTTRYFDKNKGQSAIERIVLRLRNL 130

Query: 453  XXXXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSER--DETLLPW 626
                                      +GEEKLGDLLQR W RPD +++ ++  DE  LPW
Sbjct: 131  GLGSDDEEEDDGLELDGQDSMQPAA-SGEEKLGDLLQREWVRPDYVLAEQKSNDEVALPW 189

Query: 627  ERGDDGSREVDERGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAV 806
            E+ ++ S E + +G+RK+R KAP+LAELTIED EL+RLRR GMVLRER+SV KAG+TQAV
Sbjct: 190  EKEEEISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAV 249

Query: 807  LEKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGX 986
            LEKIH TWRK ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSNY+G 
Sbjct: 250  LEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGP 309

Query: 987  XXXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAE 1166
                       +Q +     A F+P           +G+   S   +    +V  P    
Sbjct: 310  ---------SKSQTVDGEGGALFIPDVSSAETSATRSGNDATSGP-DNTEKAVKIPAHLP 359

Query: 1167 RMTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTN 1346
             MTE+EAE+NSLLD LGPRFV+WWGTG LPVDADLLP+ IPGYKTPFRLLPTGMR RLTN
Sbjct: 360  NMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTN 419

Query: 1347 AEMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAE 1526
            AEMT+LRKLA+SLPCHFALGRNRNHQGLA+AI+KLWEKS V KIAVKRGIQNTNNKLMAE
Sbjct: 420  AEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAVKRGIQNTNNKLMAE 479

Query: 1527 ELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLT 1706
            ELK LTGG+LLLRNKYYIV YRGKDFLPTSVAAALAERQELTK +QDVEE+ R       
Sbjct: 480  ELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRI------ 533

Query: 1707 SAVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVS 1886
                                       + TA +G  EGQA AGTLAEF EAQARWGRE+S
Sbjct: 534  -------------------------KAIDTASSGAEEGQALAGTLAEFYEAQARWGREIS 568

Query: 1887 TEEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETI 2066
             EE EKM EE S+AK A++VKRIEHKL VAQAKKLRAEKLLSKIE+SM+P GP  DQET+
Sbjct: 569  AEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYDQETV 628

Query: 2067 TDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTA 2246
            TDEER MFRRVGLRMKAYLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFVEDTA
Sbjct: 629  TDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTA 688

Query: 2247 RLLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEA 2426
            RLLE+ES GILVAIERVPKG+ALIYYRGKNYQRPI++RPRNLLTKAKALKRSVAMQRHEA
Sbjct: 689  RLLEFESGGILVAIERVPKGFALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHEA 748

Query: 2427 LSQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDSFM 2591
            LSQHISELE TIEQM SE+G S+D    + WSS +  +I   S+F QSEDE S M
Sbjct: 749  LSQHISELEKTIEQMSSEIGVSEDIAYESTWSSRDPDQIHRASEFVQSEDEASRM 803


>XP_010094746.1 Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis] EXB56911.1 Chloroplastic group IIA intron
            splicing facilitator CRS1 [Morus notabilis]
          Length = 838

 Score =  944 bits (2440), Expect = 0.0
 Identities = 505/768 (65%), Positives = 575/768 (74%), Gaps = 11/768 (1%)
 Frame = +3

Query: 318  WLQKWSP-SKPDPKIHSQ------NAPPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXX 476
            WL KW P    D K+         + P    Y D D+GR+AIERIV RLR          
Sbjct: 84   WLNKWPPVESSDRKVAESTDRDRTDRPDTVGYVDRDRGRNAIERIVLRLRNLGLGSDDED 143

Query: 477  XXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSE--RDETLLPWERGDDGSR 650
                            P  GEEKLGDLL+R W RPD ++  E  +D+  LPWER ++  +
Sbjct: 144  EDDKEGDIGLDGQDAMPVTGEEKLGDLLRREWIRPDFVLEEEESKDDLTLPWEREEE-EK 202

Query: 651  EVDE--RGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQ 824
             VDE  R +RK+R  APTLAELTIED ELRRLRR GM LR+R+SV KAG+TQAVLEKIH 
Sbjct: 203  GVDEGTRELRKRRVNAPTLAELTIEDEELRRLRRMGMFLRDRISVPKAGLTQAVLEKIHD 262

Query: 825  TWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXX 1004
             WRK ELVRLKFHE LAHDM+TAHEIVERRTGGLVTWRSGSVMVVYRGSNYEG       
Sbjct: 263  KWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGPP----- 317

Query: 1005 XYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDE 1184
                  Q +    DA F+P           +G   ++S AEK    V +P+  + MTE+E
Sbjct: 318  ----KTQPVNKERDALFIPDVSSAENFLTRSGDS-LTSNAEKSETPVRNPVSVQNMTEEE 372

Query: 1185 AEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSL 1364
            AE+NSLLD LGPRF +WWGTG +PVDADLLP  IPGYKTPFRLLPTGMR RLTN EMT+L
Sbjct: 373  AEFNSLLDDLGPRFDEWWGTGVIPVDADLLPPKIPGYKTPFRLLPTGMRSRLTNGEMTNL 432

Query: 1365 RKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLT 1544
            RK+A+SLP HFALGRNRNHQGLAAAI+KLWEKSLV KIAVKRGIQNTNNKLMAEELK LT
Sbjct: 433  RKVAKSLPSHFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEELKNLT 492

Query: 1545 GGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAAL 1724
            GG+LLLRNKYYIVIYRGKDFLPT+VAA LAERQ+L K +QD+EE+ R             
Sbjct: 493  GGVLLLRNKYYIVIYRGKDFLPTTVAATLAERQKLAKQVQDLEEQVRV------------ 540

Query: 1725 SERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEK 1904
                       D+E++  +  V +  +G  EGQA AGTLAEF EAQARWGRE+++EE EK
Sbjct: 541  ----------QDIEQKMQKKAVDSVPSGEEEGQALAGTLAEFYEAQARWGREITSEEREK 590

Query: 1905 MKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERF 2084
            M EEA+ AK A++VKRIEHK AVAQAKKLRAEKLL+KIEASMVP GP  DQETIT+EER 
Sbjct: 591  MIEEAAVAKHARLVKRIEHKAAVAQAKKLRAEKLLAKIEASMVPAGPDYDQETITEEERV 650

Query: 2085 MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYE 2264
            MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLI+KQKTLAFVEDTARLLEYE
Sbjct: 651  MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYE 710

Query: 2265 SSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS 2444
            S GILVAIERVPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS
Sbjct: 711  SGGILVAIERVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHIS 770

Query: 2445 ELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDSF 2588
            ELE+TIEQM+ ++  SK  +D  +WS+ E +  D  S+F QSE++D+F
Sbjct: 771  ELETTIEQMQDKIVASKSGQDEGSWSTDENLN-DNVSEFIQSENDDAF 817


>XP_010045645.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Eucalyptus grandis]
            KCW83860.1 hypothetical protein EUGRSUZ_B00725
            [Eucalyptus grandis] KCW83861.1 hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis] KCW83862.1
            hypothetical protein EUGRSUZ_B00725 [Eucalyptus grandis]
            KCW83863.1 hypothetical protein EUGRSUZ_B00725
            [Eucalyptus grandis]
          Length = 861

 Score =  936 bits (2420), Expect = 0.0
 Identities = 506/770 (65%), Positives = 568/770 (73%), Gaps = 16/770 (2%)
 Frame = +3

Query: 318  WLQKWSPSKPDPKIHSQN----------APPETRYFDTDKGRSAIERIVHRLRXXXXXXX 467
            WL KW P   + +I  ++             E RY   D+G++AIERIV RLR       
Sbjct: 72   WLNKWPPPPREREIDEESPGEVAGSDSRGEAERRYSGNDRGQNAIERIVLRLRNLGLGLD 131

Query: 468  XXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSS----ERDETLLPWERG 635
                                  GEE+LGDLL+R W RPD+ +      E D  LLPWE+ 
Sbjct: 132  DEEEGDEEEGEGEFGAARP--TGEERLGDLLRREWIRPDSFLEEDEREEDDAGLLPWEKE 189

Query: 636  DDGSREVDER--GVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVL 809
              G  + +E+  G  K+  KAP+LAELTIED ELRRLRR GM LRER+SVAKAG+TQAVL
Sbjct: 190  GKGEVKAEEKVVGGMKRSVKAPSLAELTIEDEELRRLRRNGMYLRERISVAKAGITQAVL 249

Query: 810  EKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXX 989
            EKIH  WRK ELVRLKFHE LAHDM+TAHE+VERRTGGLV WRSGSVMVVYRG NYEG  
Sbjct: 250  EKIHDKWRKEELVRLKFHEVLAHDMKTAHEVVERRTGGLVIWRSGSVMVVYRGKNYEGP- 308

Query: 990  XXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAER 1169
                      +Q I+   DA F+P           +G  V     EK   SV SP+  E 
Sbjct: 309  -------ASRSQPIVREGDALFIPDVSSANRAVAESGDDV-KPEREKSEVSVRSPVLKES 360

Query: 1170 MTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNA 1349
            +TE+E EYN LLDGLGPRF +WWGTG LPVDADLLPQ IPGYKTPFRLLPTGMR RLTNA
Sbjct: 361  LTEEEIEYNDLLDGLGPRFEEWWGTGVLPVDADLLPQKIPGYKTPFRLLPTGMRSRLTNA 420

Query: 1350 EMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1529
            EMT+LRKLA+SLPCHFALGRNRNHQGLAAAI+KLWEKS VVKIAVKRGIQNTNNKLMA+E
Sbjct: 421  EMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSSVVKIAVKRGIQNTNNKLMADE 480

Query: 1530 LKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTS 1709
            LK LTGG+LLLRNKYYIV YRGKDFLP +VA AL+ERQEL K IQDVEE+ RTG V  T 
Sbjct: 481  LKDLTGGVLLLRNKYYIVFYRGKDFLPPTVATALSERQELAKQIQDVEEKLRTGTVPPTV 540

Query: 1710 AVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVST 1889
            A A LSER E  +   DVEE+     V  A +    G A AGTLAEF EAQARWGR++S 
Sbjct: 541  ATA-LSERQELAKQIQDVEEKLQTGTVDAAPSK-EAGYAQAGTLAEFYEAQARWGRDISN 598

Query: 1890 EEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETIT 2069
            EE EKM EEAS++K+ ++VKRIEHKL +AQAKKLRA+KLLSKIEASMVP  P DDQETIT
Sbjct: 599  EEREKMIEEASKSKSVRLVKRIEHKLDLAQAKKLRADKLLSKIEASMVPASPDDDQETIT 658

Query: 2070 DEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAR 2249
            DEER MFR+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRELVKLI+KQKT  FVEDTAR
Sbjct: 659  DEERTMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTRTFVEDTAR 718

Query: 2250 LLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEAL 2429
            LLE+ES GILV+IE VPKGYALIYYRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEAL
Sbjct: 719  LLEFESGGILVSIESVPKGYALIYYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL 778

Query: 2430 SQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDE 2579
            SQHISELE TIEQM+ E+GDS + E  + WSS    + D  S+   SED+
Sbjct: 779  SQHISELEHTIEQMKKEIGDSCEIESEDPWSSKGNGQFDEVSELKMSEDD 828


>OMO96033.1 hypothetical protein CCACVL1_05105 [Corchorus capsularis]
          Length = 836

 Score =  935 bits (2417), Expect = 0.0
 Identities = 510/756 (67%), Positives = 569/756 (75%), Gaps = 8/756 (1%)
 Frame = +3

Query: 336  PSKPDPKIHSQN---APPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXXXXXXXX 506
            PS  +  I S     A  E+RYFD DKG+SAIERIV RLR                    
Sbjct: 76   PSPSEKVIQSDGDGKADAESRYFDKDKGQSAIERIVLRLRNLGLGSDDEDEEEEDGIDEY 135

Query: 507  XXXXXXPWAGEEKLGDLLQRSWARPDTIVSS-ERDETLLPWERGDDGSREV----DERGV 671
                  P  GEE+LGDLL+R W RPDT++   E+DE +LPWER ++   EV       GV
Sbjct: 136  NSR---PVTGEERLGDLLKREWVRPDTMLEEKEKDEAVLPWEREEEEEVEVAVVEGGLGV 192

Query: 672  RKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKSELVR 851
            +K+R +AP+LAELTIED ELRRLRR GM LRER++V KAG+TQAV+EKIH  WRK ELVR
Sbjct: 193  KKRRVRAPSLAELTIEDEELRRLRRMGMYLRERINVPKAGLTQAVMEKIHDKWRKEELVR 252

Query: 852  LKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQSAQNI 1031
            LKFHE LA DM+TAHEIVERRTGGLV W+SGSVMVVYRGSNYEG         +  +Q+I
Sbjct: 253  LKFHEVLAVDMKTAHEIVERRTGGLVLWKSGSVMVVYRGSNYEGP--------SSRSQSI 304

Query: 1032 LHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNSLLDG 1211
                +A F+P          G+ +  +S T EK       P  AE MTE+EAEYNSLLDG
Sbjct: 305  DREGEALFIPDVSSASNAVSGSETGTVS-TLEKSERVAVKPENAESMTEEEAEYNSLLDG 363

Query: 1212 LGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLARSLPC 1391
            LGPRFV+WWGTG LPVDADLLP+ +PGYKTPFRLLP GMRPRLTNAEMT+LRK+A+SLPC
Sbjct: 364  LGPRFVEWWGTGVLPVDADLLPEKVPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPC 423

Query: 1392 HFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILLLRNK 1571
            HFALGRNRNHQGLAAAI+KLWEKSLV KIAVKRGIQNTNNKLMAEE+K LTGG+LLLRNK
Sbjct: 424  HFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNK 483

Query: 1572 YYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSEWTED 1751
            Y+IVIYRGKDFLP SVAAALAERQELTK IQDVEE+AR   V          E ++ +ED
Sbjct: 484  YFIVIYRGKDFLPPSVAAALAERQELTKQIQDVEEKARIRAV----------EPAQSSED 533

Query: 1752 NVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEASRAK 1931
                                 +GQA AGTLAEF EAQARWGRE+S EE EKM EEAS+AK
Sbjct: 534  ---------------------KGQAPAGTLAEFYEAQARWGREISAEEREKMIEEASKAK 572

Query: 1932 TAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRVGLRM 2111
             A++VKR+EHKL VAQAKK RAE+LLSKIEASM+P  P  DQETITDEER MFRRVGLRM
Sbjct: 573  HARLVKRVEHKLTVAQAKKHRAERLLSKIEASMLPAAPDYDQETITDEERVMFRRVGLRM 632

Query: 2112 KAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGILVAIE 2291
            K YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYES GILVAIE
Sbjct: 633  KPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIE 692

Query: 2292 RVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELESTIEQM 2471
            RVPKGYALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELE TIEQM
Sbjct: 693  RVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEKTIEQM 752

Query: 2472 RSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDE 2579
            + E+G S+D ED        +   D  S+ +QSEDE
Sbjct: 753  KKEIGGSQDIED-----YANQGSFDPVSELSQSEDE 783


>XP_009360154.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 824

 Score =  934 bits (2413), Expect = 0.0
 Identities = 502/771 (65%), Positives = 568/771 (73%), Gaps = 16/771 (2%)
 Frame = +3

Query: 318  WLQKWSPSKPDP-------------KIHSQNAPPET-RYFDTDKGRSAIERIVHRLRXXX 455
            WL KW P++  P             + H Q+   +T RYFD DKG+SAIERIV RLR   
Sbjct: 74   WLNKW-PNRSSPAELARQKVNDKVKESHEQDGKADTTRYFDKDKGQSAIERIVLRLRNLG 132

Query: 456  XXXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSER--DETLLPWE 629
                                     +GEEKLGDLLQR W RPD ++  E+  DE  LPWE
Sbjct: 133  LGSDDEEEDDGIELDGQDPVPAA--SGEEKLGDLLQREWVRPDYVLEEEKSGDEVALPWE 190

Query: 630  RGDDGSREVDERGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVL 809
            + +  S + + +G+ K+R KAP+LAELTIED EL+RLRR GMVLRER+SV KAG+TQAVL
Sbjct: 191  KEEKVSDKEEVKGLSKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVL 250

Query: 810  EKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXX 989
            EKIH TWRK+ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSNY+G  
Sbjct: 251  EKIHDTWRKTELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGP- 309

Query: 990  XXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAER 1169
                      +Q +       F+P           +G+   S   +K   ++  P     
Sbjct: 310  --------SQSQTVDGERSGLFIPEISSPETSEMRSGNEATSGP-DKTEQALKIPERVHN 360

Query: 1170 MTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNA 1349
            MTE+EAE++SLLD LGPRFV+WWGTG LPVDADLLP+ IPGYKTPFRLLPTGMR RLTNA
Sbjct: 361  MTEEEAEFHSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTNA 420

Query: 1350 EMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1529
            EMT+LRKLA+SLPCHFALGRNRNHQGLA AI+KLWEKS V KIAVKRGIQNTNNKLMAEE
Sbjct: 421  EMTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAKIAVKRGIQNTNNKLMAEE 480

Query: 1530 LKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTS 1709
            +K LTGG+LLLRNKYYIVIYRGKDF+PTSVAAAL+ERQELTK +QDVEE+ R        
Sbjct: 481  IKNLTGGVLLLRNKYYIVIYRGKDFVPTSVAAALSERQELTKQVQDVEEKMRI------- 533

Query: 1710 AVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVST 1889
                                      +  A +G  EGQA AGTLAEF EAQARWGRE+S 
Sbjct: 534  ------------------------KAIDAASSGAVEGQALAGTLAEFYEAQARWGREISA 569

Query: 1890 EEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETIT 2069
            EE EKM EE SRAK AK+V+RIEHKL VAQAKKLRAEKLLSKIE+ M+P GP  DQETIT
Sbjct: 570  EEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYDQETIT 629

Query: 2070 DEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAR 2249
            DEER MFRRVGLRMKAYLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFVEDTAR
Sbjct: 630  DEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTAR 689

Query: 2250 LLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEAL 2429
            LLEYES GILVAIERVPKGYALIYYRGKNY+RPI++RPRNLLTKAKALKRSVAMQRHEAL
Sbjct: 690  LLEYESGGILVAIERVPKGYALIYYRGKNYRRPITLRPRNLLTKAKALKRSVAMQRHEAL 749

Query: 2430 SQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDED 2582
            SQHISELE  IEQM+S++G S+D  D ++WSS +  +I    +  QSE ED
Sbjct: 750  SQHISELEKNIEQMKSQVGISEDDVDESSWSSRDPEQIHRALELVQSEGED 800


>XP_009347186.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 832

 Score =  931 bits (2407), Expect = 0.0
 Identities = 503/776 (64%), Positives = 566/776 (72%), Gaps = 21/776 (2%)
 Frame = +3

Query: 318  WLQKWSPSKPDPKIHSQNA---------------PPETRYFDTDKGRSAIERIVHRLRXX 452
            WL KW       ++  QN                   TRYFD DKG++AIERIV RLR  
Sbjct: 74   WLNKWPNRSSPAELPRQNVNNKVNESQGREKDGKADSTRYFDKDKGQNAIERIVFRLRNL 133

Query: 453  XXXXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSER--DETLLPW 626
                                      +GEEKLGDLLQR W RPD ++  E+  DE  LPW
Sbjct: 134  GLGSDDEGEDDGIGLDGQDSVPVA--SGEEKLGDLLQREWVRPDYVLEEEKSADEVALPW 191

Query: 627  ERGDDGSREVDE----RGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGV 794
            E+ ++   EV++    +G+RK+R KAP+LAELTIED EL+RLRR GMVLRER+SV KAG+
Sbjct: 192  EKEEE--EEVNDKEEVKGLRKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGI 249

Query: 795  TQAVLEKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSN 974
            TQAVLEKIH TWRK+ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSN
Sbjct: 250  TQAVLEKIHDTWRKTELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSN 309

Query: 975  YEGXXXXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSP 1154
            Y+G            +Q +       F+P           +G+   +S  +    ++  P
Sbjct: 310  YKG---------PSQSQTVDGERGGLFIPDVSSAETSVTRSGNDA-TSGPDNTEQALKIP 359

Query: 1155 IPAERMTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRP 1334
                 MTE+EAE++SLLD LGPRF +WWGTG LPVDADLLP+ IPGYKTPFRLLPTGMR 
Sbjct: 360  ERVHNMTEEEAEFHSLLDDLGPRFEEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRS 419

Query: 1335 RLTNAEMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNK 1514
            RLTNAEMT+LRKLA+SLPCHFALGRNRNHQGLA AI+KLWEKS V KIAVKRGIQNTNNK
Sbjct: 420  RLTNAEMTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAKIAVKRGIQNTNNK 479

Query: 1515 LMAEELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGV 1694
            LMAEE+K LTGG+LLLRNKYYIVIYRGKDFLPTSVAAALAERQELTK +QDVEE+ R   
Sbjct: 480  LMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRI-- 537

Query: 1695 VGLTSAVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWG 1874
                                           +  A TG  EGQA AGTLAEF EAQARWG
Sbjct: 538  -----------------------------KAIDAASTGAVEGQALAGTLAEFYEAQARWG 568

Query: 1875 REVSTEEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDD 2054
            RE+S EE E+M EE SRAK AK+V+RIEHKL VAQAKKLRAEKLLSKIE+ M+P GP  D
Sbjct: 569  REISAEERERMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYD 628

Query: 2055 QETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFV 2234
            QETITDEER MFRRVGLRMKAYLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFV
Sbjct: 629  QETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 688

Query: 2235 EDTARLLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQ 2414
            EDTARLLEYES GILVAIERVPKGYALIYYRGKNYQRPI++RPRNLLTKAKALKRSVAMQ
Sbjct: 689  EDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQ 748

Query: 2415 RHEALSQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDED 2582
            RHEALSQHISELE  IEQM+S++G S+D  D ++WSS +  +I    +  QSEDED
Sbjct: 749  RHEALSQHISELEKNIEQMKSQVGISEDDVDESSWSSRDPEQIHRALELVQSEDED 804


>XP_008374754.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Malus domestica]
          Length = 827

 Score =  931 bits (2405), Expect = 0.0
 Identities = 505/776 (65%), Positives = 571/776 (73%), Gaps = 21/776 (2%)
 Frame = +3

Query: 318  WLQKW----SPSK-PDPKIHSQ----------NAPPETRYFDTDKGRSAIERIVHRLRXX 452
            WL KW    SP++ P  K++ +               TRYFD +KG+SAIERIV RLR  
Sbjct: 71   WLNKWPNRSSPAELPRQKVNEKVNESQGREQDGKADSTRYFDKNKGQSAIERIVFRLRNL 130

Query: 453  XXXXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSER--DETLLPW 626
                                      +GEEKLGDLLQR W RPD ++  E+  DE  LPW
Sbjct: 131  RLGSDDEEEDDGIGLDGQDSVPAA--SGEEKLGDLLQREWVRPDYVLEEEKSADEVALPW 188

Query: 627  ERGDDGSREVDER----GVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGV 794
            E+ ++   EV+++    G+RK+R KAP+LAELTIED EL+RLRR GMVLRER+SV KAG+
Sbjct: 189  EKEEE--EEVNDKEEVKGLRKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGI 246

Query: 795  TQAVLEKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSN 974
            TQAVLEKIH TWRK+ELVRLKFHE LA DM+TAHEIVERRTGGLV WRSGSVMVVYRGSN
Sbjct: 247  TQAVLEKIHDTWRKTELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSN 306

Query: 975  YEGXXXXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSP 1154
            Y+G            +Q +       F+P           +G+   S   +K   ++  P
Sbjct: 307  YKGP---------SQSQTVDGERGGLFIPDVSSAETSVMRSGNDATSGP-DKTEQALKIP 356

Query: 1155 IPAERMTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRP 1334
                 MTE+EAE++SLLD LGPRF +WWGTG LPVDADLLP+ IPGYKTPFRLLPTGMR 
Sbjct: 357  ERVHNMTEEEAEFHSLLDDLGPRFEEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRS 416

Query: 1335 RLTNAEMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNK 1514
            RLTNAEMT+LRKLA+SLPCHFALGRNRNHQGLA AI+KLWEKS V KIAVKRGIQNTNNK
Sbjct: 417  RLTNAEMTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAKIAVKRGIQNTNNK 476

Query: 1515 LMAEELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGV 1694
            LMAEE+K LTGG+LLLRNKYYIVIYRGKDFLPTSVAAALAERQELTK +QDVEE+ R   
Sbjct: 477  LMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRI-- 534

Query: 1695 VGLTSAVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWG 1874
                                           +  A +G  EGQA AGTLAEF EAQARWG
Sbjct: 535  -----------------------------KAIDAASSGAVEGQALAGTLAEFYEAQARWG 565

Query: 1875 REVSTEEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDD 2054
            RE+S EE EKM EE SRAK AK+V+RIEHKL VAQAKKLRAEKLLSKIE+ M+P GP  D
Sbjct: 566  REISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYD 625

Query: 2055 QETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFV 2234
            QETITDEER MFRRVGLRMKAYLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFV
Sbjct: 626  QETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFV 685

Query: 2235 EDTARLLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQ 2414
            EDTARLLEYES GILVAIERVPKGYALIYYRGKNY+RPI++RPRNLLTKAKALKRSVAMQ
Sbjct: 686  EDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPITLRPRNLLTKAKALKRSVAMQ 745

Query: 2415 RHEALSQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDED 2582
            RHEALSQHISELE  IEQM+S++G S+D  D ++WSS +  +I    +  QSEDED
Sbjct: 746  RHEALSQHISELEKNIEQMKSQVGISEDDVDESSWSSRDPEQIHRALELVQSEDED 801


>KCW83864.1 hypothetical protein EUGRSUZ_B00725 [Eucalyptus grandis]
          Length = 856

 Score =  930 bits (2404), Expect = 0.0
 Identities = 501/752 (66%), Positives = 560/752 (74%), Gaps = 16/752 (2%)
 Frame = +3

Query: 318  WLQKWSPSKPDPKIHSQN----------APPETRYFDTDKGRSAIERIVHRLRXXXXXXX 467
            WL KW P   + +I  ++             E RY   D+G++AIERIV RLR       
Sbjct: 72   WLNKWPPPPREREIDEESPGEVAGSDSRGEAERRYSGNDRGQNAIERIVLRLRNLGLGLD 131

Query: 468  XXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSS----ERDETLLPWERG 635
                                  GEE+LGDLL+R W RPD+ +      E D  LLPWE+ 
Sbjct: 132  DEEEGDEEEGEGEFGAARP--TGEERLGDLLRREWIRPDSFLEEDEREEDDAGLLPWEKE 189

Query: 636  DDGSREVDER--GVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVL 809
              G  + +E+  G  K+  KAP+LAELTIED ELRRLRR GM LRER+SVAKAG+TQAVL
Sbjct: 190  GKGEVKAEEKVVGGMKRSVKAPSLAELTIEDEELRRLRRNGMYLRERISVAKAGITQAVL 249

Query: 810  EKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXX 989
            EKIH  WRK ELVRLKFHE LAHDM+TAHE+VERRTGGLV WRSGSVMVVYRG NYEG  
Sbjct: 250  EKIHDKWRKEELVRLKFHEVLAHDMKTAHEVVERRTGGLVIWRSGSVMVVYRGKNYEGP- 308

Query: 990  XXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAER 1169
                      +Q I+   DA F+P           +G  V     EK   SV SP+  E 
Sbjct: 309  -------ASRSQPIVREGDALFIPDVSSANRAVAESGDDV-KPEREKSEVSVRSPVLKES 360

Query: 1170 MTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNA 1349
            +TE+E EYN LLDGLGPRF +WWGTG LPVDADLLPQ IPGYKTPFRLLPTGMR RLTNA
Sbjct: 361  LTEEEIEYNDLLDGLGPRFEEWWGTGVLPVDADLLPQKIPGYKTPFRLLPTGMRSRLTNA 420

Query: 1350 EMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEE 1529
            EMT+LRKLA+SLPCHFALGRNRNHQGLAAAI+KLWEKS VVKIAVKRGIQNTNNKLMA+E
Sbjct: 421  EMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSSVVKIAVKRGIQNTNNKLMADE 480

Query: 1530 LKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTS 1709
            LK LTGG+LLLRNKYYIV YRGKDFLP +VA AL+ERQEL K IQDVEE+ RTG V  T 
Sbjct: 481  LKDLTGGVLLLRNKYYIVFYRGKDFLPPTVATALSERQELAKQIQDVEEKLRTGTVPPTV 540

Query: 1710 AVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVST 1889
            A A LSER E  +   DVEE+     V  A +    G A AGTLAEF EAQARWGR++S 
Sbjct: 541  ATA-LSERQELAKQIQDVEEKLQTGTVDAAPSK-EAGYAQAGTLAEFYEAQARWGRDISN 598

Query: 1890 EEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETIT 2069
            EE EKM EEAS++K+ ++VKRIEHKL +AQAKKLRA+KLLSKIEASMVP  P DDQETIT
Sbjct: 599  EEREKMIEEASKSKSVRLVKRIEHKLDLAQAKKLRADKLLSKIEASMVPASPDDDQETIT 658

Query: 2070 DEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAR 2249
            DEER MFR+VGLRMK YLPLGIRGVFDGVIENMHLHWKHRELVKLI+KQKT  FVEDTAR
Sbjct: 659  DEERTMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTRTFVEDTAR 718

Query: 2250 LLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEAL 2429
            LLE+ES GILV+IE VPKGYALIYYRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEAL
Sbjct: 719  LLEFESGGILVSIESVPKGYALIYYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL 778

Query: 2430 SQHISELESTIEQMRSELGDSKDSEDGNAWSS 2525
            SQHISELE TIEQM+ E+GDS + E  + WSS
Sbjct: 779  SQHISELEHTIEQMKKEIGDSCEIESEDPWSS 810


>XP_016718281.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Gossypium hirsutum]
          Length = 855

 Score =  927 bits (2397), Expect = 0.0
 Identities = 503/762 (66%), Positives = 570/762 (74%), Gaps = 7/762 (0%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQNA----PPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +       ETRY +  KG+SAI+RIV RLR              
Sbjct: 81   LQAWS--SPSEKVIQSDGNGKVDSETRYLN--KGQSAIDRIVLRLRNLGLGSDDEDEEDD 136

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V + 
Sbjct: 137  GTDDYNST----PVTGEERLGDLLKREWVRPDTRLIEKEKEEAVLPWEREEAVVEVVVKE 192

Query: 666  G--VRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
            G  ++K+  KAPTLAELTIED ELRRLRR GM LRER++V KAG+T+ VLEKIH  WRK 
Sbjct: 193  GGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKE 252

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE LA DMRTAHEIVERRTGGLV WRSGSVMVVYRGSNYEG         +QS
Sbjct: 253  ELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSK------SQS 306

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
             +      +A F+P            GS   +ST+EK +  V  P  +E MTE+EAEYNS
Sbjct: 307  GEG-----EALFIPDVSSAGKRESETGS---ASTSEKSDKVVVKPERSESMTEEEAEYNS 358

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDGLGPRFV+WWGTG LPVDADLLP  IPGYKTPFRLLP GMRPRLTN+EMT+LRK+A+
Sbjct: 359  LLDGLGPRFVEWWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNSEMTNLRKIAK 418

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKSLV KIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 419  SLPCHFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEELKNLTGGVLL 478

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPT+VAAALAERQ+LTK IQD EE+ R                  
Sbjct: 479  LRNKYFIVIYRGKDFLPTNVAAALAERQDLTKQIQDAEEKLRI----------------- 521

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                            V  A +G  +GQA AGTLAEF EAQARWGR++S EE EKM EEA
Sbjct: 522  --------------KAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREKMIEEA 567

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK AK++KR+EHKLA+AQAKKLRAE+LL+KIEASM+P  P  DQETITDEER MFRRV
Sbjct: 568  SKAKHAKLIKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERVMFRRV 627

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLG+RGVFDGVIENMHLHWKHRELVKLISKQK LAFVED+ARLLEYES GIL
Sbjct: 628  GLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYESGGIL 687

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+T
Sbjct: 688  VAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISKLENT 747

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDS 2585
            IEQM+ E+G S+D +D N   SGE  + D  S+ T+SEDE++
Sbjct: 748  IEQMKKEIGASEDGDDDNNRGSGEHGQFDPVSELTESEDEEN 789


>XP_012093011.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Jatropha curcas] XP_012093012.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Jatropha curcas] KDP20125.1 hypothetical
            protein JCGZ_05894 [Jatropha curcas]
          Length = 839

 Score =  927 bits (2397), Expect = 0.0
 Identities = 509/777 (65%), Positives = 569/777 (73%), Gaps = 19/777 (2%)
 Frame = +3

Query: 318  WLQKWSPSKPDP-----KIHSQNAPPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXX 482
            WL KW P  P P     ++   N   +T++    KG++AIERIV RLR            
Sbjct: 65   WLSKWGPPSPAPAPAPRQVARSNGQDKTQFSPEGKGQNAIERIVLRLRNLGLGSDDEDDD 124

Query: 483  XXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSS----ERDETLLPW-------- 626
                             G+E+L DLLQR W RPDTI S+    E D+ +LPW        
Sbjct: 125  GEEDKGIDRGDKAEV-TGDERLADLLQREWVRPDTIFSNRDDEESDDLVLPWQRKEIERE 183

Query: 627  ERGDDGSREVDERGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAV 806
            ERG +G RE      RK+  KAPTLAELTIED ELRRLR+ GM +RER+SV KAG+T+ V
Sbjct: 184  ERGGEGGRE------RKRTVKAPTLAELTIEDEELRRLRKMGMFVRERISVPKAGLTKDV 237

Query: 807  LEKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGX 986
            LEKIH  WRK ELVRLKFHE LAHDM+TAHEI ERRTGGLV WR+GSVM+VYRGSNYEG 
Sbjct: 238  LEKIHDKWRKQELVRLKFHEVLAHDMKTAHEITERRTGGLVIWRAGSVMMVYRGSNYEGP 297

Query: 987  XXXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAE 1166
                        Q++    DA F+P           N   V SST +K   ++     AE
Sbjct: 298  --------PSKPQSVDKEGDALFIPDVSSPDTETLRNHDGV-SSTVKKRELAIGRMNSAE 348

Query: 1167 RMTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTN 1346
             MTE+EAE+NSLLD LGPRF +WWGTG LPVDADLLP  IPGYKTPFRLLPTGMR RLTN
Sbjct: 349  NMTEEEAEFNSLLDSLGPRFEEWWGTGILPVDADLLPPKIPGYKTPFRLLPTGMRSRLTN 408

Query: 1347 AEMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAE 1526
            AEMT+LRKLA++LPCHFALGRNRNHQGLAAAI K+WEKSLV KIAVKRGIQNTNNKLMA+
Sbjct: 409  AEMTNLRKLAKTLPCHFALGRNRNHQGLAAAIRKIWEKSLVAKIAVKRGIQNTNNKLMAD 468

Query: 1527 ELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLT 1706
            ELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTK IQDVEE+ R+      
Sbjct: 469  ELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVRS-----R 523

Query: 1707 SAVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVS 1886
                ALSE                            +G+A AGTLAEF EAQARWG+ +S
Sbjct: 524  GVETALSEEG--------------------------QGKALAGTLAEFYEAQARWGKTIS 557

Query: 1887 TEEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETI 2066
             EE EKM E+A+R+K A+VVKRIEHKLAVAQAKKLRAE+LLSKIEASM+P GP  DQETI
Sbjct: 558  AEEREKMIEDAARSKRARVVKRIEHKLAVAQAKKLRAERLLSKIEASMLPSGPDYDQETI 617

Query: 2067 TDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTA 2246
            TDEER MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTA
Sbjct: 618  TDEERAMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTA 677

Query: 2247 RLLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEA 2426
            RLLEYES GILVAIERVPKG+ALIYYRGKNY+RPI++RPRNLLTKAKALKRSVAMQRHEA
Sbjct: 678  RLLEYESGGILVAIERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHEA 737

Query: 2427 LSQHISELESTIEQMRSELGDSKDSEDGNAWSS--GEEIRIDGGSQFTQSEDEDSFM 2591
            LSQHISELE TIE+M+ E+G S + ED N W+S   E  R++  S FTQSEDE SF+
Sbjct: 738  LSQHISELERTIEEMKKEIGFSPEEEDENNWTSEPKEHGRLNNLSDFTQSEDEPSFI 794


>XP_012440292.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 854

 Score =  927 bits (2396), Expect = 0.0
 Identities = 504/762 (66%), Positives = 570/762 (74%), Gaps = 7/762 (0%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQN----APPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +    A  ETRY +  KG+SAI+RIV RLR              
Sbjct: 80   LQAWS--SPSEKVIQSDGNGKADSETRYLN--KGQSAIDRIVLRLRNLGLGSDDEDEEDD 135

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V + 
Sbjct: 136  GTDDYNST----PVTGEERLGDLLKREWVRPDTRLIEKEKEEAVLPWEREEAVVEVVVKE 191

Query: 666  G--VRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
            G  ++K+  KAPTLAELTIED ELRRLRR GM LRER++V KAG+T+ VLEKIH  WRK 
Sbjct: 192  GGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKE 251

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE LA DMRTAHEIVERRTGGLV WRSGSVMVVYRGSNYEG         +QS
Sbjct: 252  ELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSK------SQS 305

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
             +      +A F+P            GS    ST+EK +  V  P  +E MTE+EAEYNS
Sbjct: 306  GEG-----EALFIPDVSSAGKRESETGS---GSTSEKSDKVVVKPERSESMTEEEAEYNS 357

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDGLGPRFV+WWGTG LPVDADLLP  IPGYKTPFRLLP GMRPRLTNAEMT+LRK+A+
Sbjct: 358  LLDGLGPRFVEWWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAK 417

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKS+V KIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 418  SLPCHFALGRNRNHQGLAAAIIKLWEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLL 477

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPT+VAAALAERQ+LTK IQD EE+ R                  
Sbjct: 478  LRNKYFIVIYRGKDFLPTNVAAALAERQDLTKQIQDAEEKLRI----------------- 520

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                            V  A +G  +GQA AGTLAEF EAQARWGR++S EE EKM EEA
Sbjct: 521  --------------KAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREKMIEEA 566

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK AK+VKR+EHKLA+AQAKKLRAE+LL+KIEASM+P  P  DQETITDEER MFRRV
Sbjct: 567  SKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERVMFRRV 626

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLG+RGVFDGVIENMHLHWKHRELVKLISKQK LAFVED+ARLLEYES GIL
Sbjct: 627  GLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYESGGIL 686

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+T
Sbjct: 687  VAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISKLENT 746

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDS 2585
            IEQM+ E+  S+D +D N   SG+  + D  S+FT+SEDE++
Sbjct: 747  IEQMKKEIDASEDGDDDNNRGSGKHGQFDPVSEFTESEDEEN 788


>XP_012440291.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Gossypium raimondii]
          Length = 854

 Score =  927 bits (2396), Expect = 0.0
 Identities = 505/762 (66%), Positives = 570/762 (74%), Gaps = 7/762 (0%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQN----APPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +    A  ETRY +  KG+SAI+RIV RLR              
Sbjct: 80   LQAWS--SPSEKVIQSDGNGKADSETRYLN--KGQSAIDRIVLRLRNLGLGSDDEDEEDD 135

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V + 
Sbjct: 136  GTDDYNST----PVTGEERLGDLLKREWVRPDTRLIEKEKEEAVLPWEREEAVVEVVVKE 191

Query: 666  G--VRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
            G  ++K+  KAPTLAELTIED ELRRLRR GM LRER++V KAG+T+ VLEKIH  WRK 
Sbjct: 192  GGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKE 251

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE LA DMRTAHEIVERRTGGLV WRSGSVMVVYRGSNYEG         +QS
Sbjct: 252  ELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSK------SQS 305

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
             +      +A F+P            GS    ST+EK +  V  P  +E MTE+EAEYNS
Sbjct: 306  GEG-----EALFIPDVSSAGKRESETGS---GSTSEKSDKVVVKPERSESMTEEEAEYNS 357

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDGLGPRFV+WWGTG LPVDADLLP  IPGYKTPFRLLP GMRPRLTNAEMT+LRK+A+
Sbjct: 358  LLDGLGPRFVEWWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAK 417

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKS+V KIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 418  SLPCHFALGRNRNHQGLAAAIIKLWEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLL 477

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPT+VAAALAERQ+LTK IQD EE+ R                  
Sbjct: 478  LRNKYFIVIYRGKDFLPTNVAAALAERQDLTKQIQDAEEKLRI----------------- 520

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                            V  A +G  +GQA AGTLAEF EAQARWGR++S EE EKM EEA
Sbjct: 521  --------------KAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREKMIEEA 566

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK AK+VKR+EHKLA+AQAKKLRAE+LL+KIEASM+P  P  DQETITDEER MFRRV
Sbjct: 567  SKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERVMFRRV 626

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLG+RGVFDGVIENMHLHWKHRELVKLISKQK LAFVED+ARLLEYES GIL
Sbjct: 627  GLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYESGGIL 686

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+T
Sbjct: 687  VAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISKLENT 746

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDS 2585
            IEQM+ E+  S+D  D N  SSG+  + D  S+FT+SEDE++
Sbjct: 747  IEQMKKEIDASEDGGDDNNRSSGKHGQFDPVSEFTESEDEEN 788


>XP_017637137.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Gossypium arboreum]
          Length = 855

 Score =  926 bits (2392), Expect = 0.0
 Identities = 502/762 (65%), Positives = 570/762 (74%), Gaps = 7/762 (0%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQNA----PPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +       ETRY +  KG+SAI+RIV RLR              
Sbjct: 81   LQAWS--SPSEKVIQSDGNGKVDSETRYLN--KGQSAIDRIVLRLRNLGLGSDDEDEEDD 136

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V + 
Sbjct: 137  GTDDYNST----PVIGEERLGDLLKREWVRPDTRLIEKEKEEAVLPWEREEAVVEVVVKE 192

Query: 666  G--VRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
            G  ++K+  KAPTLAELTIED ELRRLRR GM LRER++V KAG+T+ VLEKIH  WRK 
Sbjct: 193  GGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKE 252

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE L+ DMRTAHEIVERRTGGLV WRSGSVMVVYRGSNYEG         +QS
Sbjct: 253  ELVRLKFHEFLSVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSK------SQS 306

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
             +      +A F+P            GS   +ST+EK +  V  P  +E MTE+EAEYNS
Sbjct: 307  GEG-----EALFIPDVSSAGKRESETGS---ASTSEKSDKVVVKPERSESMTEEEAEYNS 358

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDGLGPRFV+WWGTG LPVDADLLP  IPGYKTPFRLLP GMRPRLTNAEMT+LRK+A+
Sbjct: 359  LLDGLGPRFVEWWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAK 418

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKSLV KIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 419  SLPCHFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEELKNLTGGVLL 478

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPT+VAAALAERQ+LTK IQD EE+ R                  
Sbjct: 479  LRNKYFIVIYRGKDFLPTNVAAALAERQDLTKQIQDAEEKLRI----------------- 521

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                            V  A +G  +GQA AGTLAEF EAQARWGR++S EE EKM EEA
Sbjct: 522  --------------KAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREKMIEEA 567

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK AK++KR+EHKLA+AQAKKLRAE+LL+KIEASM+P  P  DQETITDEER MFRRV
Sbjct: 568  SKAKHAKLIKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERVMFRRV 627

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLG+RGVFDGVIENMHLHWKHRELVKLISKQK LAFVED+ARLLEYES GIL
Sbjct: 628  GLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYESGGIL 687

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+T
Sbjct: 688  VAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISKLENT 747

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQSEDEDS 2585
            IEQM+ E+G S+D +D N   SGE  + D  S+ ++SEDE++
Sbjct: 748  IEQMKKEIGASEDGDDDNNRGSGEHGQFDPVSELSESEDEEN 789


>XP_008393315.1 PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Malus domestica]
          Length = 813

 Score =  922 bits (2384), Expect = 0.0
 Identities = 497/767 (64%), Positives = 564/767 (73%), Gaps = 17/767 (2%)
 Frame = +3

Query: 318  WLQKW----SPSK-PDPKIHSQNAPPE----------TRYFDTDKGRSAIERIVHRLRXX 452
            WL KW    SP++ P  K++ + +             TRYFD DKG+SAIERIV RLR  
Sbjct: 74   WLNKWPNRSSPTELPRQKVNDKVSESHGREQDGKADTTRYFDKDKGQSAIERIVLRLRNL 133

Query: 453  XXXXXXXXXXXXXXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDTIVSSER--DETLLPW 626
                                       GEEKLGDLLQR W RPD ++  E+  DE  LPW
Sbjct: 134  GLGSDDEEZDDGIGLDGQDPVPAAX--GEEKLGDLLQREWVRPDYVLEEEKSGDEVALPW 191

Query: 627  ERGDDGSREVDERGVRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAV 806
            E+ ++ S + + +G+RK+R KAP+LAELTIED EL+RLRR GMVLRER+SV KAG+TQAV
Sbjct: 192  EKEEEVSDKEEVKGLRKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAV 251

Query: 807  LEKIHQTWRKSELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGX 986
            LEKIH  WRK+ELVRLKFHE LA DM+TAHEIVERR GGLV WRSGSVMVVYRGSNY+G 
Sbjct: 252  LEKIHDMWRKTELVRLKFHEVLALDMKTAHEIVERRXGGLVLWRSGSVMVVYRGSNYKGP 311

Query: 987  XXXXXXXYTQSAQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAE 1166
                       +Q +       F+P           +G+   S   +K   ++  P    
Sbjct: 312  ---------SQSQTVDGXRSGLFIPEISSPETSEMRSGNEATSGP-DKTEQALKIPERVH 361

Query: 1167 RMTEDEAEYNSLLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTN 1346
             MTE+EAE++SLLD LGPRFV+WWGTG LPVDADLLP+ IPGYKTPFRLLPTGMR RLTN
Sbjct: 362  NMTEEEAEFHSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRSRLTN 421

Query: 1347 AEMTSLRKLARSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAE 1526
            AE T+LRKLA+SLPCHFALGRNRNHQGLA AI+KLWEKS V KIAVKRGIQNTNNKLMAE
Sbjct: 422  AEXTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAKIAVKRGIQNTNNKLMAE 481

Query: 1527 ELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLT 1706
            E+K LTGG+LLLRNKYYIVIYRGKDF+PTSVAAAL+ERQELTK +QDVEE+ R       
Sbjct: 482  EIKNLTGGVLLLRNKYYIVIYRGKDFVPTSVAAALSERQELTKQVQDVEEKVRI------ 535

Query: 1707 SAVAALSERSEWTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVS 1886
                                       +  A +G  EGQA AGTLAEF EAQARWGRE+S
Sbjct: 536  -------------------------KAIDAASSGAVEGQALAGTLAEFYEAQARWGREIS 570

Query: 1887 TEEHEKMKEEASRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETI 2066
             EE EKM EE SRAK AK+V+RIEHKL VAQAKKLRAEKLLSKIE+ M+P GP  DQETI
Sbjct: 571  AEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSKIESLMLPAGPDYDQETI 630

Query: 2067 TDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTA 2246
            TDEER MFRRVGLRMKAYLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFVEDTA
Sbjct: 631  TDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTA 690

Query: 2247 RLLEYESSGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEA 2426
            RLLEYES GILVAIERVPKGYALIYYRGKNY+RPI++RPRNLLTKAKALKRSVAMQRHEA
Sbjct: 691  RLLEYESGGILVAIERVPKGYALIYYRGKNYRRPITLRPRNLLTKAKALKRSVAMQRHEA 750

Query: 2427 LSQHISELESTIEQMRSELGDSKDSEDGNAWSSGEEIRIDGGSQFTQ 2567
            LSQHISELE  IEQM+S++G S+D  D ++WSS +  +I   S+  Q
Sbjct: 751  LSQHISELEKNIEQMKSQVGISEDDVDDSSWSSRDPEQIHRASELVQ 797


>XP_012440290.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii] KJB52985.1
            hypothetical protein B456_008G286900 [Gossypium
            raimondii]
          Length = 868

 Score =  920 bits (2378), Expect = 0.0
 Identities = 506/776 (65%), Positives = 570/776 (73%), Gaps = 21/776 (2%)
 Frame = +3

Query: 321  LQKWSPSKPDPKIHSQN----APPETRYFDTDKGRSAIERIVHRLRXXXXXXXXXXXXXX 488
            LQ WS   P  K+   +    A  ETRY +  KG+SAI+RIV RLR              
Sbjct: 80   LQAWS--SPSEKVIQSDGNGKADSETRYLN--KGQSAIDRIVLRLRNLGLGSDDEDEEDD 135

Query: 489  XXXXXXXXXXXXPWAGEEKLGDLLQRSWARPDT-IVSSERDETLLPWERGDDGSREVDER 665
                        P  GEE+LGDLL+R W RPDT ++  E++E +LPWER +     V + 
Sbjct: 136  GTDDYNST----PVTGEERLGDLLKREWVRPDTRLIEKEKEEAVLPWEREEAVVEVVVKE 191

Query: 666  G--VRKKRAKAPTLAELTIEDSELRRLRREGMVLRERVSVAKAGVTQAVLEKIHQTWRKS 839
            G  ++K+  KAPTLAELTIED ELRRLRR GM LRER++V KAG+T+ VLEKIH  WRK 
Sbjct: 192  GGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKE 251

Query: 840  ELVRLKFHESLAHDMRTAHEIVERRTGGLVTWRSGSVMVVYRGSNYEGXXXXXXXXYTQS 1019
            ELVRLKFHE LA DMRTAHEIVERRTGGLV WRSGSVMVVYRGSNYEG         +QS
Sbjct: 252  ELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSK------SQS 305

Query: 1020 AQNILHSPDAPFVPXXXXXXXXXXGNGSYVISSTAEKVNPSVTSPIPAERMTEDEAEYNS 1199
             +      +A F+P            GS    ST+EK +  V  P  +E MTE+EAEYNS
Sbjct: 306  GEG-----EALFIPDVSSAGKRESETGS---GSTSEKSDKVVVKPERSESMTEEEAEYNS 357

Query: 1200 LLDGLGPRFVDWWGTGFLPVDADLLPQHIPGYKTPFRLLPTGMRPRLTNAEMTSLRKLAR 1379
            LLDGLGPRFV+WWGTG LPVDADLLP  IPGYKTPFRLLP GMRPRLTNAEMT+LRK+A+
Sbjct: 358  LLDGLGPRFVEWWGTGILPVDADLLPPKIPGYKTPFRLLPAGMRPRLTNAEMTNLRKIAK 417

Query: 1380 SLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEELKMLTGGILL 1559
            SLPCHFALGRNRNHQGLAAAI+KLWEKS+V KIAVKRGIQNTNNKLMAEELK LTGG+LL
Sbjct: 418  SLPCHFALGRNRNHQGLAAAIIKLWEKSVVAKIAVKRGIQNTNNKLMAEELKNLTGGVLL 477

Query: 1560 LRNKYYIVIYRGKDFLPTSVAAALAERQELTKDIQDVEERARTGVVGLTSAVAALSERSE 1739
            LRNKY+IVIYRGKDFLPT+VAAALAERQ+LTK IQD EE+ R                  
Sbjct: 478  LRNKYFIVIYRGKDFLPTNVAAALAERQDLTKQIQDAEEKLRI----------------- 520

Query: 1740 WTEDNVDVEERSLRAEVGTAHTGLTEGQAAAGTLAEFLEAQARWGREVSTEEHEKMKEEA 1919
                            V  A +G  +GQA AGTLAEF EAQARWGR++S EE EKM EEA
Sbjct: 521  --------------KAVEPAQSGEDKGQAPAGTLAEFYEAQARWGRDISAEEREKMIEEA 566

Query: 1920 SRAKTAKVVKRIEHKLAVAQAKKLRAEKLLSKIEASMVPVGPSDDQETITDEERFMFRRV 2099
            S+AK AK+VKR+EHKLA+AQAKKLRAE+LL+KIEASM+P  P  DQETITDEER MFRRV
Sbjct: 567  SKAKHAKLVKRVEHKLAIAQAKKLRAERLLAKIEASMIPAAPDYDQETITDEERVMFRRV 626

Query: 2100 GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESSGIL 2279
            GLRMK YLPLG+RGVFDGVIENMHLHWKHRELVKLISKQK LAFVED+ARLLEYES GIL
Sbjct: 627  GLRMKPYLPLGVRGVFDGVIENMHLHWKHRELVKLISKQKVLAFVEDSARLLEYESGGIL 686

Query: 2280 VAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELEST 2459
            VAIERVPKGYALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS+LE+T
Sbjct: 687  VAIERVPKGYALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISKLENT 746

Query: 2460 IEQMRSELGDSKDSEDGNAWSSGEEIRIDGG--------------SQFTQSEDEDS 2585
            IEQM+ E+  S+D  D N  SSGE  + D                S+FT+SEDE++
Sbjct: 747  IEQMKKEIDASEDGGDDNNRSSGEHGQFDDDNNRGSGKHGQFDPVSEFTESEDEEN 802