BLASTX nr result

ID: Magnolia22_contig00009101 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00009101
         (668 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006843168.2 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570...    57   7e-06
XP_011622899.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570...    57   7e-06

>XP_006843168.2 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 isoform X2
           [Amborella trichopoda]
          Length = 479

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 38/119 (31%), Positives = 61/119 (51%)
 Frame = -2

Query: 610 IGHMNFPSFVNSKKLVIQVDLSERMGVCLLSKLL*NFPSLEELEFWSHNSATIARSASMK 431
           IG  NFP F N +KL I+VD+++ + V   +  L + PSL+EL  W              
Sbjct: 320 IGRSNFPVFGNLRKLSIKVDMTQPLEVTEFTCFLKSCPSLKELVIWCDEP---------H 370

Query: 430 KVSFNSRYWEKQRKHFHFLNSTLKRVVIEDLKGDIFTFYFSKFLIGSAKVLERMTVRYS 254
              ++S  WE        ++  L+RVVI D  G+     F  FL+ +A+VL+++TV ++
Sbjct: 371 GKKYSSGLWENVEPTDCIIHH-LERVVINDFSGEEDGMGFMNFLLKNARVLKKITVNFN 428


>XP_011622899.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 isoform X1
           [Amborella trichopoda] ERN04843.1 hypothetical protein
           AMTR_s00146p00056530 [Amborella trichopoda]
          Length = 495

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 38/119 (31%), Positives = 61/119 (51%)
 Frame = -2

Query: 610 IGHMNFPSFVNSKKLVIQVDLSERMGVCLLSKLL*NFPSLEELEFWSHNSATIARSASMK 431
           IG  NFP F N +KL I+VD+++ + V   +  L + PSL+EL  W              
Sbjct: 336 IGRSNFPVFGNLRKLSIKVDMTQPLEVTEFTCFLKSCPSLKELVIWCDEP---------H 386

Query: 430 KVSFNSRYWEKQRKHFHFLNSTLKRVVIEDLKGDIFTFYFSKFLIGSAKVLERMTVRYS 254
              ++S  WE        ++  L+RVVI D  G+     F  FL+ +A+VL+++TV ++
Sbjct: 387 GKKYSSGLWENVEPTDCIIHH-LERVVINDFSGEEDGMGFMNFLLKNARVLKKITVNFN 444


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