BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00002836
         (1546 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010273794.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   411   e-137
XP_002278228.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   383   e-126
CBI35920.3 unnamed protein product, partial [Vitis vinifera]          381   e-125
JAT45309.1 DNA-directed RNA polymerase I subunit rpa49, partial ...   381   e-124
XP_010062676.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   363   e-118
XP_018835108.1 PREDICTED: uncharacterized protein LOC109002008 [...   364   e-118
XP_006350715.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   350   e-113
XP_019247027.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   350   e-113
XP_015077190.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   348   e-112
XP_009769327.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   348   e-112
XP_004240985.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   346   e-112
EOY23991.1 DNA-directed RNA polymerase I subunit rpa49, putative...   347   e-111
XP_016464019.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   346   e-111
XP_007039490.2 PREDICTED: DNA-directed RNA polymerase I subunit ...   347   e-111
XP_009620774.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   345   e-111
XP_010937236.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   343   e-110
XP_015902884.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   343   e-110
OAY81587.1 DNA-directed RNA polymerase I subunit rpa49 [Ananas c...   342   e-110
XP_006465974.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   343   e-110
XP_006426597.1 hypothetical protein CICLE_v10025597mg [Citrus cl...   343   e-110

>XP_010273794.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
            nucifera]
          Length = 406

 Score =  411 bits (1056), Expect = e-137
 Identities = 230/416 (55%), Positives = 290/416 (69%), Gaps = 8/416 (1%)
 Frame = -3

Query: 1247 LSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVS 1068
            L V ME F +  DKI P+VGYFPSGF+P +    +E  D  K+RV+ NK   NRLQ+VVS
Sbjct: 13   LDVKMEIFHQHPDKIPPLVGYFPSGFNPKR----SEEEDSTKVRVYSNKNRPNRLQLVVS 68

Query: 1067 PKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRGVP-- 894
            P  SKVE+VGTS+  EA A QVCTYALGVLDKET+ LKIVPI +NKIFRLEPRVRG    
Sbjct: 69   PNSSKVEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVRGSEVS 128

Query: 893  -----QVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESK 729
                   L +EDLT E+K + + DLTN++GTK+S  R +K E L +KE DP +Q  ++ K
Sbjct: 129  DKEPRGELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESLKQKE-DPISQDAVDKK 187

Query: 728  IEGVEINKEALERVSAEVG-NIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQSG 552
            IEG  INK+ALE  +     N+PPHD TATTP+KAYPL+KII KGEWD+L DV+EL+QSG
Sbjct: 188  IEGFVINKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLELLQSG 247

Query: 551  ANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHKK 372
            A  +S       D YPSFVCNRI+KL EI DE EKK+LACI SYIT LI+F++     ++
Sbjct: 248  ATISS-------DAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKFKD-----QR 295

Query: 371  SVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLTD 192
            SV     +SA+YHK P  +  KF+ +FA++E  RL  +K DLLISY+LVLTL+ D F TD
Sbjct: 296  SVDGA--SSAKYHKFPPIILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFIDKFSTD 353

Query: 191  ITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            ++DIAKDL+M P  LR +Y +LGCK       + K ++V L VPLQ PK + + RR
Sbjct: 354  MSDIAKDLRMTPVSLRLHYQNLGCK----LSRVDKLLMVTLPVPLQFPKPRTQRRR 405


>XP_002278228.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
            vinifera]
          Length = 421

 Score =  383 bits (983), Expect = e-126
 Identities = 215/416 (51%), Positives = 285/416 (68%), Gaps = 8/416 (1%)
 Frame = -3

Query: 1247 LSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVS 1068
            ++V ME   E  +KI P+VGYFPSGFDP K +  +E+   P ++VFRNK  +NRLQ+VVS
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQ-DHESDPPPAVKVFRNKARANRLQLVVS 85

Query: 1067 PKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG---- 900
            P +SKV +VGTS+ GEA + QVCTYALGVLDKET+ LKIVPI +NKIFRLEPRV G    
Sbjct: 86   PNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDAS 145

Query: 899  --VPQVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESKI 726
               P  L K + T E+K   + DLTN++GTK+S  + +K + L +K+ DP +Q++++ K+
Sbjct: 146  VDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKD-DPRSQKDLDRKL 204

Query: 725  EGVEINKEALERVSA-EVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQSGA 549
            + V INKEALE  SA    NIPP+D TATTP++AY LDKII KGEWD+L D+++L+Q+G 
Sbjct: 205  KEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGV 264

Query: 548  NTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHKKS 369
               S+        Y SFVCNRI KL E+ DE EK  LACIFSYI  L+++++ +      
Sbjct: 265  EVESS-------AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNS----- 312

Query: 368  VPVVPNTSAEYHKIPIALFDKFIRMFA-DTEADRLPKEKADLLISYILVLTLYADGFLTD 192
               +  +SA++HKIP  L  KF  MFA D+++ RL +EK DLLISY+LVLTLYAD F TD
Sbjct: 313  ---MDASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTD 369

Query: 191  ITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
             +DIA+DL+M+   LR ++ HLGCK      S  K  +  L VPL  P+L+ K RR
Sbjct: 370  PSDIARDLRMSAVKLRAHFEHLGCKLV----SQNKVTMATLPVPLTFPRLRQKRRR 421


>CBI35920.3 unnamed protein product, partial [Vitis vinifera]
          Length = 391

 Score =  381 bits (978), Expect = e-125
 Identities = 214/412 (51%), Positives = 282/412 (68%), Gaps = 8/412 (1%)
 Frame = -3

Query: 1235 MESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVSPKES 1056
            ME   E  +KI P+VGYFPSGFDP K +  +E+   P ++VFRNK  +NRLQ+VVSP +S
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQ-DHESDPPPAVKVFRNKARANRLQLVVSPNDS 59

Query: 1055 KVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG------VP 894
            KV +VGTS+ GEA + QVCTYALGVLDKET+ LKIVPI +NKIFRLEPRV G       P
Sbjct: 60   KVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119

Query: 893  QVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESKIEGVE 714
              L K + T E+K   + DLTN++GTK+S  + +K + L +K+ DP +Q++++ K++ V 
Sbjct: 120  SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKD-DPRSQKDLDRKLKEVV 178

Query: 713  INKEALERVSA-EVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQSGANTAS 537
            INKEALE  SA    NIPP+D TATTP++AY LDKII KGEWD+L D+++L+Q+G    S
Sbjct: 179  INKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVES 238

Query: 536  AVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHKKSVPVV 357
            +        Y SFVCNRI KL E+ DE EK  LACIFSYI  L+++++ +         +
Sbjct: 239  S-------AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNS--------M 283

Query: 356  PNTSAEYHKIPIALFDKFIRMFA-DTEADRLPKEKADLLISYILVLTLYADGFLTDITDI 180
              +SA++HKIP  L  KF  MFA D+++ RL +EK DLLISY+LVLTLYAD F TD +DI
Sbjct: 284  DASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDI 343

Query: 179  AKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            A+DL+M+   LR ++ HLGCK      S  K  +  L VPL  P+L+ K RR
Sbjct: 344  ARDLRMSAVKLRAHFEHLGCKLV----SQNKVTMATLPVPLTFPRLRQKRRR 391


>JAT45309.1 DNA-directed RNA polymerase I subunit rpa49, partial [Anthurium
            amnicola]
          Length = 469

 Score =  381 bits (979), Expect = e-124
 Identities = 206/420 (49%), Positives = 276/420 (65%), Gaps = 12/420 (2%)
 Frame = -3

Query: 1247 LSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVS 1068
            L V +++  E+ D+ APVVGYF SGFDPLK     E   +P ++VFRN +   RL+VVV 
Sbjct: 58   LEVRVQAVPETPDRAAPVVGYFSSGFDPLKR---GEGDGEPDVKVFRNLRRPGRLEVVVR 114

Query: 1067 PKE-----SKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVR 903
            P++     S VE+VG S+ GEA  PQVCTYALGVLDKE + L+IVPI ANKIFRLEPRV 
Sbjct: 115  PRQGDGSPSNVEFVGRSYTGEAAMPQVCTYALGVLDKEKQSLRIVPIAANKIFRLEPRVI 174

Query: 902  GVPQV------LNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQRE 741
            G           ++ +LT E     +  LTN++G+K+ K   R+   L  +  DPEA   
Sbjct: 175  GKAPPGTEAGEASQNELTAEALEEKMRLLTNLYGSKKDKSMVRRLSTLNEQRDDPEANER 234

Query: 740  IESKIEGVEINKEALERVSAEV-GNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMEL 564
            +E++++ V++NKEALE V  +V  NIPPHD  ATTPEK Y +D+II K EWD L DV++ 
Sbjct: 235  LETQMKNVKVNKEALENVGEKVVRNIPPHDPAATTPEKVYIIDEIIHKKEWDQLLDVLQF 294

Query: 563  MQSGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSK 384
            M+SG  T   + FW  + YP FVCNRI KL E  DE++KK+LACI SYIT L++F  ++ 
Sbjct: 295  MESGETT---IGFWEENGYPGFVCNRIRKLRETQDEEDKKRLACILSYITHLLKFLEIAS 351

Query: 383  RHKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADG 204
            + +KS+  V   S+ YH IP  +++KF+++F D+E+  L  E+ DLLISYILVLTL+ D 
Sbjct: 352  QPRKSLSFVHGGSSSYHNIPRFIYNKFVKLFVDSESYALSNERKDLLISYILVLTLFVDN 411

Query: 203  FLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            F TD  DIA+DLKM    L+PYY +LGC     +   K  +V+ L VPL+ P+LK K RR
Sbjct: 412  FKTDPLDIARDLKMTYLSLKPYYQYLGCSL---SQEGKMQIVITLPVPLKFPELKKKRRR 468


>XP_010062676.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
            grandis] KCW69807.1 hypothetical protein EUGRSUZ_F03167
            [Eucalyptus grandis]
          Length = 415

 Score =  363 bits (933), Expect = e-118
 Identities = 202/421 (47%), Positives = 280/421 (66%), Gaps = 9/421 (2%)
 Frame = -3

Query: 1259 PSVELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSN--EAGDDPKIRVFRNKQFSNR 1086
            P  +LS T+ +  +S+DKI P+VGYFPSGFDP         +  ++P +RV+RN ++ NR
Sbjct: 15   PREKLSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEEPGVRVYRNGKWPNR 74

Query: 1085 LQVVVSPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRV 906
            LQ+VV P ES V +VG+S  GE T  Q CTYALGVLDKE++ LK+VPI  NKIFRLEPRV
Sbjct: 75   LQLVVRPPESNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPIACNKIFRLEPRV 134

Query: 905  RG-----VPQVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQRE 741
                    P  L + +++ ++K + V +L  +FGTK+S  + +K +  LR+E DP +Q++
Sbjct: 135  ASDLPEEEPPELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQ-SLRQEDDPNSQKD 193

Query: 740  IESKIEGVEINKEALERVSAEVG-NIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMEL 564
            ++ KI+ V INKEALE   A +  NIPP++++AT P+ AYPL+KIILKGEWD++ D+ + 
Sbjct: 194  LDRKIKEVAINKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYIKDIFQF 253

Query: 563  MQSGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSK 384
            ++ G   +        D YP+FVCNRIHKLGE+ DE EK+ L CI SYI  LI+F++   
Sbjct: 254  LEEGQKVS-------PDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIKFKDQHS 306

Query: 383  RHKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADG 204
                S       S++ HKIP  L  KF  MF++ E+  LP EK DLLISY+LVLTL+AD 
Sbjct: 307  ADGAS-------SSKNHKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVLTLFADD 359

Query: 203  FLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVA-LRVPLQLPKLKMKFR 27
            F TD TDIAKDL+M+   +R ++ HLGCK      S +K+V+ A L VPL+ P+L+ + R
Sbjct: 360  FRTDPTDIAKDLRMSSVTIRQHFEHLGCK-----FSREKNVLYAKLPVPLKFPELRRRRR 414

Query: 26   R 24
            R
Sbjct: 415  R 415


>XP_018835108.1 PREDICTED: uncharacterized protein LOC109002008 [Juglans regia]
          Length = 438

 Score =  364 bits (935), Expect = e-118
 Identities = 203/421 (48%), Positives = 278/421 (66%), Gaps = 9/421 (2%)
 Frame = -3

Query: 1259 PSVELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEA--GDDPKIRVFRNKQFSNR 1086
            PS  +   ++   E   K +P VGYFPSG+DP K+   N     + P + V+R++++S R
Sbjct: 38   PSPTVQAQVQVIHEDPQKASPFVGYFPSGYDPSKNYGGNNCLETESPSVTVYRSQKWSKR 97

Query: 1085 LQVVVSPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRV 906
             Q+VVSP  S V++VGT++ GEA A Q C YALGV DKE + LKI P+   KIFRLEP+V
Sbjct: 98   FQLVVSPTGSNVDFVGTNYSGEAMAGQQCRYALGVFDKEAQTLKIAPVACGKIFRLEPKV 157

Query: 905  RGV------PQVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQR 744
            RG+      P+   KE+L+ +++V  + +LTN++GTK+S +  +K +  L +E DP +Q+
Sbjct: 158  RGLDVADEEPESTAKEELSAQQRVYKMRELTNLYGTKKSIKEAKK-KHALNQEDDPNSQK 216

Query: 743  EIESKIEGVEINKEALERVSAEVG-NIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVME 567
            E++ KI+ V+INKEALE   A +  N+PP+D +AT+P++AYPLDKIILKGEW  L D+ E
Sbjct: 217  ELDGKIKEVKINKEALESTDAHIARNVPPYDASATSPQEAYPLDKIILKGEWGFLEDIFE 276

Query: 566  LMQSGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLS 387
            L+Q GA  AS       D YP+FVCNRIHKL EI DE EK+ L+CIFSY+T LI+F++  
Sbjct: 277  LLQVGAEVAS-------DAYPTFVCNRIHKLQEIQDEVEKRTLSCIFSYVTHLIKFKD-- 327

Query: 386  KRHKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYAD 207
               + S+  V  +SA+ HKIP  LF KF  MF+   + RL  EK DLLISY+LVLTLYAD
Sbjct: 328  ---QHSMDGV--SSAKGHKIPSILFQKFSTMFSPV-SKRLSAEKNDLLISYVLVLTLYAD 381

Query: 206  GFLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFR 27
             F TD +DIAKDL+ +   LR +Y HLGCK           ++  L +PLQ P ++ K R
Sbjct: 382  EFRTDPSDIAKDLRTSSIKLRVHYEHLGCK----LSRQNNLILFTLPLPLQFPMVRQKRR 437

Query: 26   R 24
            R
Sbjct: 438  R 438


>XP_006350715.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            tuberosum]
          Length = 431

 Score =  350 bits (898), Expect = e-113
 Identities = 202/416 (48%), Positives = 282/416 (67%), Gaps = 9/416 (2%)
 Frame = -3

Query: 1244 SVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVSP 1065
            +VTME+  E+ + I+P+VGYFPSG+DPL +  +N+  ++   +++RN + +NRLQ+VVSP
Sbjct: 39   TVTMETIAENPNNISPIVGYFPSGYDPLTN--NNDGVEELSTKLYRNAKRNNRLQLVVSP 96

Query: 1064 KESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRGVPQV- 888
              S+V++VGT++ GEAT+ Q+CTY+LG+LDKET+ LKIVPI ANKI RLEPRVRG+    
Sbjct: 97   NGSQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGLEAQE 156

Query: 887  -----LNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESKIE 723
                   K++LT E++ + + +LT  + +K++ R+ RK +  LR++ D   Q E +  I 
Sbjct: 157  TEDPDTAKQELTAEERNDKMRELTQKYSSKKTIRQARKLD-SLRQQEDTGNQEEFDRNIA 215

Query: 722  GVEINKEALERVSA--EVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQSGA 549
            G  INKEALE   A     NIPPHD  AT P+ AYPLD+II KGEWD L D+ EL ++GA
Sbjct: 216  GA-INKEALEVAVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGA 274

Query: 548  NTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHKKS 369
                       D YPSFVCNR +KL  I DEDEKK+LA IFS+IT L++F++     K S
Sbjct: 275  EMT-------PDLYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFKD-----KHS 322

Query: 368  VPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLTDI 189
            +  V  +SA++HK P  L  KF  MF+ +++ RLP+EK  LLI+Y+LVLTL+AD F +D 
Sbjct: 323  MDGV--SSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDP 380

Query: 188  TDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVA-LRVPLQLPKLKMKFRR 24
            +DIAKDL++    LRP+Y +LGCK        +K+VV+A L VPL  P ++ K RR
Sbjct: 381  SDIAKDLRINAVALRPFYEYLGCKLVR-----EKNVVLATLPVPLVFPSVRRKRRR 431


>XP_019247027.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
            attenuata] OIT01790.1 hypothetical protein A4A49_25030
            [Nicotiana attenuata]
          Length = 444

 Score =  350 bits (898), Expect = e-113
 Identities = 200/417 (47%), Positives = 285/417 (68%), Gaps = 8/417 (1%)
 Frame = -3

Query: 1250 ELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVV 1071
            +L+VT+E+  E+ +K +P+VGYF SG+DPL++  SN        +++RN + +NRLQ+VV
Sbjct: 55   QLAVTIETIAENPNKTSPIVGYFSSGYDPLRNNDSNA-------QLYRNVKRNNRLQLVV 107

Query: 1070 SPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG--V 897
            SP  ++V++VGT++ GEAT+ Q+CTY+LGVLDKET+ LKIVPI ANKI RLEPR+RG  V
Sbjct: 108  SPNGAQVDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRIRGSDV 167

Query: 896  PQVLN----KEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESK 729
            P+  +    K++LT E++ + + +LT ++ +K+S R+ RK +  LR++ D   Q E +  
Sbjct: 168  PENEDPDTVKQELTAEERTDKMRELTQMYSSKKSIRQARKLD-SLRQQEDTGTQEEFDRN 226

Query: 728  IEGVEINKEALE--RVSAEVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQS 555
            I G  INKEALE    +    NIPPHD  AT P+ AYPL++IIL+GEWD+L DV++L ++
Sbjct: 227  IAGA-INKEALEVAVTTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDYLLDVLKLTEA 285

Query: 554  GANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHK 375
            GA T       + D YPSFVCNR +KL  I +E+EK++LA I SYIT L++F++     K
Sbjct: 286  GAET-------KPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKD-----K 333

Query: 374  KSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLT 195
             S+  V  +SA++HKIP  LF KF  MFA  ++ RLP EK  LLI+Y+LVLTL+ D F +
Sbjct: 334  HSMDGV--SSAKHHKIPGMLFQKFSSMFAVPDSKRLPDEKKALLINYVLVLTLFVDDFRS 391

Query: 194  DITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            D++DIAKDL+M    LRP+Y +LGCK     H L    +  L VPL+   ++ K RR
Sbjct: 392  DLSDIAKDLRMDIGALRPHYEYLGCKLVREKHVL----LATLPVPLKFQTVRRKRRR 444


>XP_015077190.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            pennellii]
          Length = 432

 Score =  348 bits (892), Expect = e-112
 Identities = 203/415 (48%), Positives = 280/415 (67%), Gaps = 8/415 (1%)
 Frame = -3

Query: 1244 SVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVSP 1065
            +VTME+  E+ + I+P+VGYFPSG+DPL++  +N+  ++   + +RN + +NRLQVVVSP
Sbjct: 40   TVTMETIAENPNNISPIVGYFPSGYDPLRN--TNDGVEELSTKFYRNVKRNNRLQVVVSP 97

Query: 1064 KESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG--VPQ 891
              S+V++VGT++ GEAT+ Q+CTY+LG+LDKET+ LKIVPI ANKI RLEPRVRG  VP 
Sbjct: 98   YGSQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSEVPD 157

Query: 890  VLN----KEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESKIE 723
              +    K++LT E++ + + +LT ++ +K+S R+ RK +  LR++ D   Q E +  I 
Sbjct: 158  AEDPDTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLD-SLRQQEDTGNQEEFDRNIA 216

Query: 722  GVEINKEALERVSA--EVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQSGA 549
            G  INKEALE   A     NIPPHD  AT P+ AYPLD+II KGEWD L D+ EL ++GA
Sbjct: 217  GA-INKEALEVTVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGA 275

Query: 548  NTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHKKS 369
              A        D YPSFV NR +KL  I DEDEKK+LA I S+IT L++F++     K S
Sbjct: 276  EMA-------PDLYPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFKD-----KHS 323

Query: 368  VPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLTDI 189
            +  V  +SA++HK P  L  KF  MF+ +++ RLP+EK  LLI+Y+LVLTL+AD F +D 
Sbjct: 324  MDGV--SSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDP 381

Query: 188  TDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            +DIAKDL++    LRP+Y +LGCK        K  V+  L VPL  P ++ K RR
Sbjct: 382  SDIAKDLRINAVALRPFYEYLGCKLVRE----KNIVLATLPVPLVFPGVRRKRRR 432


>XP_009769327.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
            X1 [Nicotiana sylvestris] XP_016440475.1 PREDICTED:
            DNA-directed RNA polymerase I subunit rpa49-like isoform
            X1 [Nicotiana tabacum]
          Length = 446

 Score =  348 bits (893), Expect = e-112
 Identities = 200/417 (47%), Positives = 280/417 (67%), Gaps = 8/417 (1%)
 Frame = -3

Query: 1250 ELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVV 1071
            +L+VT+E+  ES +K +P+VGYF SG+DPL++  SN        +++RN + +NRLQ+VV
Sbjct: 57   QLAVTIETIAESPNKTSPIVGYFSSGYDPLRNNDSNA-------QLYRNVKRNNRLQLVV 109

Query: 1070 SPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRGVPQ 891
            SP  + V++VGT++ GEAT+ Q+CTY+LGVLDKET+ LKIVPI ANKI RLEPRVRG   
Sbjct: 110  SPNGAPVDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRVRGSDA 169

Query: 890  VLN------KEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESK 729
              N      K++LT E++ + + +LT ++ +K+S R+ RK +  LR++ D   Q E +  
Sbjct: 170  PENEDPDTVKQELTAEERTDKMRELTQMYSSKKSIRQARKLD-SLRQQEDTGNQEEFDRN 228

Query: 728  IEGVEINKEALE--RVSAEVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQS 555
            I G  INKEALE    +    NIPPHD  AT PE AYPL++IIL+GEWD+L DV++L ++
Sbjct: 229  IAGA-INKEALEVAVTTDNARNIPPHDLAATAPELAYPLNRIILEGEWDYLLDVLKLTEA 287

Query: 554  GANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHK 375
            GA         + D YPSFVCNR +KL  I +E+EK++LA I SYIT L++F++     K
Sbjct: 288  GAE-------MKPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKD-----K 335

Query: 374  KSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLT 195
             S+  V  +SA++HKIP  LF KF  MFA  ++ R+P EK  LLI+Y+LVLTL+ D F +
Sbjct: 336  HSMDGV--SSAKHHKIPGMLFQKFSSMFAVPDSKRIPDEKKALLINYVLVLTLFVDDFRS 393

Query: 194  DITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            D++DIAKDL+M    LRP+Y +LGCK     H L    +  L VPL+   ++ K RR
Sbjct: 394  DLSDIAKDLRMDIGALRPHYEYLGCKLVREKHVL----LATLPVPLKFQTVRRKRRR 446


>XP_004240985.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            lycopersicum]
          Length = 410

 Score =  346 bits (888), Expect = e-112
 Identities = 202/415 (48%), Positives = 280/415 (67%), Gaps = 8/415 (1%)
 Frame = -3

Query: 1244 SVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVSP 1065
            +VTME+  E+ + I+P+VGYFPSG+DPL++  +N+  ++   +++RN + +NRLQVVVSP
Sbjct: 18   TVTMETIAENPNNISPMVGYFPSGYDPLRN--TNDGVEELSTKLYRNVRRNNRLQVVVSP 75

Query: 1064 KESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG--VPQ 891
              S+V++VGT++ GEAT+ Q+CTY+LG+LDKET+ LKIVPI ANKI RLEPRVRG  VP 
Sbjct: 76   YGSQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSEVPD 135

Query: 890  VLN----KEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESKIE 723
              +    K++LT E++ + + +LT ++ +K+S R+ RK +  LR++ D   Q E +  I 
Sbjct: 136  AEDPDTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLD-SLRQQEDTGNQEEFDRNIA 194

Query: 722  GVEINKEALERVSA--EVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQSGA 549
            G  INKEALE   A     NIPPHD  AT P+ AYPLD+II KGEWD L D+ EL ++GA
Sbjct: 195  GA-INKEALEVTVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGA 253

Query: 548  NTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHKKS 369
                       D YPSFV NR +KL  I DEDEKK+LA I S+IT L++F++     K S
Sbjct: 254  EMT-------PDLYPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFKD-----KHS 301

Query: 368  VPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLTDI 189
            +  V  +SA++HK P  L  KF  MF+ +++ RLP+EK  LLI+Y+LVLTL+AD F +D 
Sbjct: 302  MDGV--SSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDP 359

Query: 188  TDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            +DIAKDL++    LRP+Y +LGCK        K  V+  L VPL  P ++ K RR
Sbjct: 360  SDIAKDLRINAVALRPFYEYLGCKLVRE----KNIVLATLPVPLVFPGVRRKRRR 410


>EOY23991.1 DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao]
          Length = 457

 Score =  347 bits (891), Expect = e-111
 Identities = 199/447 (44%), Positives = 284/447 (63%), Gaps = 25/447 (5%)
 Frame = -3

Query: 1289 IIPQNDGNIAPSVELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDD------ 1128
            I P +    A      V ++ F++  +KI P+V YFPSG++P K       G++      
Sbjct: 29   IEPMSQNLGAKKENFQVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEE 88

Query: 1127 ---------PKIRVFRN--KQFSNRLQVVVSPKESKVEYVGTSFLGEATAPQVCTYALGV 981
                     P+++V+RN  ++ +NRLQVVVSP  S V++VG+++ GEA A QVC Y+LGV
Sbjct: 89   EGPDNKSNQPRVKVYRNMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGV 148

Query: 980  LDKETKRLKIVPITANKIFRLEPRVRGVPQVLNKE-------DLTEEKKVNNVADLTNVF 822
            LD+ET+ LKI+PI +NKIFRLEPRVR   +  NK+       +LT E K + + +LT ++
Sbjct: 149  LDRETRTLKIIPIASNKIFRLEPRVRS-SETANKDVSSSVKSELTTEDKEDKMGELTALY 207

Query: 821  GTKQSKRRFRKWEVLLRKEVDPEAQREIESKIEGVEINKEALERVSAEVG-NIPPHDTTA 645
            GTK+ +++ RK    L+KEVDPE+Q+ ++ KIE V  NKEAL   SA V  NIPPHD++A
Sbjct: 208  GTKKDRKK-RKDLNNLKKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSA 266

Query: 644  TTPEKAYPLDKIILKGEWDHLSDVMELMQSGANTASAVEFWRTDTYPSFVCNRIHKLGEI 465
            TTP +AYPLDKIILKG+W+ L D+  L++ GA  AS       + YP+FVCNRI+KL  I
Sbjct: 267  TTPVEAYPLDKIILKGDWEFLGDIYGLLEVGAEVAS-------NAYPTFVCNRINKLEGI 319

Query: 464  GDEDEKKKLACIFSYITLLIRFRNLSKRHKKSVPVVPNTSAEYHKIPIALFDKFIRMFAD 285
             DE EK+KL+C+FS+IT L++F +     + +       SA+ HKIP  +  +F  MF D
Sbjct: 320  QDETEKRKLSCVFSFITHLVKFNDQFSMDRVA-------SAKGHKIPSIIRQRFFTMFTD 372

Query: 284  TEADRLPKEKADLLISYILVLTLYADGFLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAG 105
                +  +++ +LLISY+LVLTL+ADGF TD +DIAKDL+M+   LRP++ +LGCK    
Sbjct: 373  PGLRKPSRDQINLLISYVLVLTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVRE 432

Query: 104  AHSLKKSVVVALRVPLQLPKLKMKFRR 24
                  S+   L VPL+ P   +K +R
Sbjct: 433  ----NNSIFTTLPVPLKFPSETLKRQR 455


>XP_016464019.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
            [Nicotiana tabacum]
          Length = 442

 Score =  346 bits (888), Expect = e-111
 Identities = 199/417 (47%), Positives = 285/417 (68%), Gaps = 8/417 (1%)
 Frame = -3

Query: 1250 ELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVV 1071
            +L+VT+E+  E+ +K +P+VGYF SG+DPL++  S+        +++RN + +NRLQ+VV
Sbjct: 53   QLAVTIETIAENPNKTSPIVGYFSSGYDPLRNNNSSA-------QLYRNVKRNNRLQLVV 105

Query: 1070 SPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG--V 897
            SP  ++V++VGT++ GEAT+ Q+CTY+LGVLDKET+ LKIVPI ANKI RLEPRVRG  V
Sbjct: 106  SPNGAQVDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRVRGSDV 165

Query: 896  PQVLN----KEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESK 729
            P+  +    K++LT E++ + + +LT ++ +K+S R+ RK +  LR++ D   Q E +  
Sbjct: 166  PENEDPDTVKQELTAEERNDKMRELTQMYSSKKSIRQARKLD-SLRQQEDTGNQEEFDRN 224

Query: 728  IEGVEINKEALE--RVSAEVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQS 555
            I G  INKEALE    +    NIPPHD  AT P+ AYPL++IIL+GEWD+L DV++L ++
Sbjct: 225  IAGA-INKEALEVAITTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDYLLDVLKLTEA 283

Query: 554  GANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHK 375
            GA         + D YPSFVCNR +KL  I +E+EK++LA I SYIT L++F++     K
Sbjct: 284  GAE-------MKPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKD-----K 331

Query: 374  KSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLT 195
             S+  V  +SA++HKIP  LF KF  MFA  ++ RLP+EK  LLI+Y+LVLTL+ D F +
Sbjct: 332  HSMDGV--SSAKHHKIPGMLFQKFSSMFAVPDSKRLPEEKKSLLINYVLVLTLFVDDFRS 389

Query: 194  DITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            D++DIAKDL+M    LRP+Y +LGCK     H L    +  L VPL+   ++ K RR
Sbjct: 390  DLSDIAKDLRMNIGTLRPHYEYLGCKLVREKHVL----LATLPVPLKFQTVRRKRRR 442


>XP_007039490.2 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Theobroma
            cacao]
          Length = 457

 Score =  347 bits (889), Expect = e-111
 Identities = 201/447 (44%), Positives = 283/447 (63%), Gaps = 25/447 (5%)
 Frame = -3

Query: 1289 IIPQNDGNIAPSVELSVTMESFRESSDKIAPVVGYFPSGFDPLK----------HRMSNE 1140
            I P +    A      V ++ F++  +KI P+V YFPSG++P K               E
Sbjct: 29   IEPMSQNLGAKKENFQVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQEEEEEEEEE 88

Query: 1139 AGDD-----PKIRVFRN--KQFSNRLQVVVSPKESKVEYVGTSFLGEATAPQVCTYALGV 981
             G D     P+++V+RN  ++ +NRLQVVVSP  S V++VG+++ GEA A QVC Y+LGV
Sbjct: 89   EGPDNKSNQPRVKVYRNMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCKYSLGV 148

Query: 980  LDKETKRLKIVPITANKIFRLEPRVRGVPQVLNKE-------DLTEEKKVNNVADLTNVF 822
            LD+ET+ LKI+PI +NKIFRLEPRVR   +  NK+       +LT E K + + +LT ++
Sbjct: 149  LDRETRTLKIIPIASNKIFRLEPRVRS-SETANKDVSSSVKSELTTEDKEDKMGELTALY 207

Query: 821  GTKQSKRRFRKWEVLLRKEVDPEAQREIESKIEGVEINKEALERVSAEVG-NIPPHDTTA 645
            GTK+ +++ RK    L+KEVDPE+Q+ ++ KIE V  NKEAL   SA V  NIPPHD +A
Sbjct: 208  GTKKDRKK-RKDLNNLKKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDCSA 266

Query: 644  TTPEKAYPLDKIILKGEWDHLSDVMELMQSGANTASAVEFWRTDTYPSFVCNRIHKLGEI 465
            TTP +AYPLDKIILKG+W+ L D+  L++ GA  AS       + YP+FVCNRI+KL  I
Sbjct: 267  TTPVEAYPLDKIILKGDWEFLGDIYGLLEVGAEVAS-------NAYPTFVCNRINKLEGI 319

Query: 464  GDEDEKKKLACIFSYITLLIRFRNLSKRHKKSVPVVPNTSAEYHKIPIALFDKFIRMFAD 285
             DE EK+KL+C+FS+IT L++F +     + +       SA+ HKIP  +  +F  MF D
Sbjct: 320  QDETEKRKLSCVFSFITHLVKFNDQFSMDRVA-------SAKGHKIPSIIRQRFFTMFTD 372

Query: 284  TEADRLPKEKADLLISYILVLTLYADGFLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAG 105
                +  +++ +LLISY+LVLTL+ADGF TD +DIAKDL+M+   LRP++ +LGCK    
Sbjct: 373  PGLRKPSRDQINLLISYVLVLTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVRE 432

Query: 104  AHSLKKSVVVALRVPLQLPKLKMKFRR 24
                  S+   L VPL+ P   +K +R
Sbjct: 433  ----NNSIFTTLPVPLKFPSENLKRQR 455


>XP_009620774.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
            tomentosiformis]
          Length = 442

 Score =  345 bits (886), Expect = e-111
 Identities = 200/417 (47%), Positives = 286/417 (68%), Gaps = 8/417 (1%)
 Frame = -3

Query: 1250 ELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVV 1071
            +L+VT+E+  E+ +K +P+VGYF SG+DPL++  +N A      +++RN + +NRLQ+VV
Sbjct: 53   QLAVTIETIAENPNKTSPIVGYFSSGYDPLRNN-NNSA------QLYRNVKRNNRLQLVV 105

Query: 1070 SPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRVRG--V 897
            SP  ++V++VGT++ GEAT+ Q+CTY+LGVLDKET+ LKIVPI ANKI RLEPRVRG  V
Sbjct: 106  SPNGAQVDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRVRGSDV 165

Query: 896  PQVLN----KEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESK 729
            P+  +    K++LT E++ + + +LT ++ +K+S R+ RK +  LR++ D   Q E +  
Sbjct: 166  PENEDPDTVKQELTAEERNDKMRELTQMYSSKKSIRQARKLD-SLRQQEDTGNQEEFDRN 224

Query: 728  IEGVEINKEALE--RVSAEVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQS 555
            I G  INKEALE    +    NIPPHD  AT P+ AYPL++IIL+GEWD+L DV++L ++
Sbjct: 225  IAGA-INKEALEVAITTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDYLLDVLKLTEA 283

Query: 554  GANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRHK 375
            GA         + D YPSFVCNR +KL  I +E+EK++LA I SYIT L++F++     K
Sbjct: 284  GAE-------MKPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKD-----K 331

Query: 374  KSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFLT 195
             S+  V  +SA++HKIP  LF KF  MFA  ++ RLP+EK  LLI+Y+LVLTL+ D F +
Sbjct: 332  HSMDGV--SSAKHHKIPGMLFQKFSSMFAVPDSKRLPEEKKSLLINYVLVLTLFVDDFRS 389

Query: 194  DITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
            D++DIAKDL+M    LRP+Y +LGCK     H L    +  L VPL+   ++ K RR
Sbjct: 390  DLSDIAKDLRMNIGTLRPHYEYLGCKLVREKHVL----LATLPVPLKFQTVRRKRRR 442


>XP_010937236.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Elaeis
            guineensis]
          Length = 425

 Score =  343 bits (879), Expect = e-110
 Identities = 200/420 (47%), Positives = 270/420 (64%), Gaps = 12/420 (2%)
 Frame = -3

Query: 1247 LSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVVS 1068
            + V ME   E++D+IAP+VGYFPSG+DP  H  ++ A   P +RVFRN+ +S+RL++VVS
Sbjct: 18   VEVEMEVLSETTDRIAPIVGYFPSGYDP--HNAASAAAGGPSVRVFRNQMYSSRLELVVS 75

Query: 1067 PKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPRV------ 906
            P++S VE+VGTS+ GEA  PQ+CTY LGVLDKET  LKIVPI ANKIFRLEPR+      
Sbjct: 76   PRDSNVEFVGTSYSGEAAGPQLCTYTLGVLDKETHTLKIVPIAANKIFRLEPRLTKNLST 135

Query: 905  -RGVPQVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIESK 729
                 + L +E L E K    +ADLTN++GTK+ + +  +W  L ++  DP A+ ++ S+
Sbjct: 136  DTEPSEGLAEEGLAEGKVERKIADLTNLYGTKKDRDKDNRWRSLNQQRNDPSAREQLASE 195

Query: 728  IEG---VEINKEALERV-SAEVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELM 561
              G    +I+ E+ E V  A V NIPPHD +A T EKAY LD+II K E  +L D++E +
Sbjct: 196  NPGGDDDDIDNESHEDVKEAAVPNIPPHDRSANTSEKAYLLDEIIPKAERPYLLDILENL 255

Query: 560  QSGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKR 381
            Q G + AS        +YP+FV NRIHKL EI D+ EK+KLACI SYIT L  F    + 
Sbjct: 256  QYGEDLAS-------KSYPTFVYNRIHKLREIQDDKEKEKLACILSYITHLHTFWERIRF 308

Query: 380  HKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGF 201
             K     +  T A+  KIP  ++ K +RMF + E+D +  EK +LLI YILVLTL+AD F
Sbjct: 309  SKHKAKFLGMT-ADAPKIPRIIYQKVVRMFVNPESDIVSMEKKELLIGYILVLTLFADKF 367

Query: 200  LTDITDIAKDLKMAPSYLRPYYVHLGCKC-PAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
             +D +DIA+DLKM    L+PY++ LGCK    GA    +   + L VPLQ P+ +   RR
Sbjct: 368  RSDPSDIARDLKMTVHSLKPYFLQLGCKIFHEGAF---QQSFMTLPVPLQFPEHRRNRRR 424


>XP_015902884.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X1
            [Ziziphus jujuba] XP_015902891.1 PREDICTED: DNA-directed
            RNA polymerase I subunit rpa49 isoform X2 [Ziziphus
            jujuba]
          Length = 439

 Score =  343 bits (879), Expect = e-110
 Identities = 197/419 (47%), Positives = 274/419 (65%), Gaps = 10/419 (2%)
 Frame = -3

Query: 1250 ELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPKIRVFRNKQFSNRLQVVV 1071
            E+  T++  ++ SD+  P+VGYFPSGFDP +   + E+    ++RV RN +   RLQVVV
Sbjct: 43   EVQATIQVLQDHSDRAPPLVGYFPSGFDPEESARTGESSST-RVRVLRNMEKPKRLQVVV 101

Query: 1070 SPKESKVEYVGTSFLGEATAPQV-CTYALGVLDKETKRLKIVPITANKIFRLEPRVRGV- 897
            +P  SKV++VGT++ GEA A Q  C YALGVLDKET+ LKIVPI +NKIFRLEP+V G+ 
Sbjct: 102  TPPGSKVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVGGLD 161

Query: 896  -----PQVLNKEDLTEEKKVNNVAD-LTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIE 735
                 P+    E+L+ ++K   + D LTN++GTK+S++   K   L + + DP++  +++
Sbjct: 162  FSNKEPENSAVEELSAQQKTEKMRDKLTNLYGTKKSRKEVIKINSLKQAD-DPDSLNDLD 220

Query: 734  SKIEGVEINKEALERVSAEVG-NIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQ 558
             +I+ V +NK+ALE   A    NIPPH+T+AT+PE+AYPLDKIILKGEW  L D+ + +Q
Sbjct: 221  KQIKKVVVNKDALESTDAHTARNIPPHNTSATSPEEAYPLDKIILKGEWSFLEDIYKFLQ 280

Query: 557  SGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRFRNLSKRH 378
             G   +S       +TYP+F+ NRI+KL +I DE EKKKL+CIFSYIT LI+F++L    
Sbjct: 281  GGREVSS-------NTYPTFISNRIYKLRDIQDEVEKKKLSCIFSYITHLIKFKDLHNMD 333

Query: 377  KKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGFL 198
             +        SA+ H  P  L  KF  +F + +   +  EK DLL+SY+LVLTLYAD F 
Sbjct: 334  NRK-------SAKRHNFPSILHQKFSTLFGEEKI--MSPEKHDLLVSYVLVLTLYADEFR 384

Query: 197  TDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVA-LRVPLQLPKLKMKFRR 24
            TD +DIAKDL+M    LR +Y HLGCK      S + ++  A L VPLQ P+ + K RR
Sbjct: 385  TDFSDIAKDLRMNTIQLRTHYEHLGCKI-----SRQNNISFAILPVPLQFPQTRPKRRR 438


>OAY81587.1 DNA-directed RNA polymerase I subunit rpa49 [Ananas comosus]
          Length = 430

 Score =  342 bits (878), Expect = e-110
 Identities = 197/419 (47%), Positives = 266/419 (63%), Gaps = 11/419 (2%)
 Frame = -3

Query: 1247 LSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAG--DDPKIRVFRNKQFSNRLQVV 1074
            L V+ME+  ES D+IAPVVGYFPSG+DPL    ++ A   DDP +RVFRNK+ +NRL++V
Sbjct: 23   LDVSMEALAESGDRIAPVVGYFPSGYDPLGGGAADPAAAADDPSVRVFRNKRRANRLELV 82

Query: 1073 VSPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLKIVPITANKIFRLEPR--VRG 900
            VSP+ S VE+VG S+ GEA APQ+CTYALGVLDK T+ LKIVPI ANKIFRLEPR  V  
Sbjct: 83   VSPRGSAVEFVGRSYAGEAAAPQLCTYALGVLDKATQTLKIVPIAANKIFRLEPRLAVSQ 142

Query: 899  VPQVLNKEDLTEEKKV-----NNVADLTNVFGTKQSKRRFRKWEVLLRKEVDPEAQREIE 735
               +   E LTEE          + DLT+++GTK+ + + +KW  L ++  DP A   +E
Sbjct: 143  PAHMEASEGLTEESMATGQVGRKIQDLTSMYGTKKDRDKDKKWMSLNQQRNDPSAYEHLE 202

Query: 734  SKIEGVEI-NKEALERVSAEVGNIPPHDTTATTPEKAYPLDKIILKGEWDHLSDVMELMQ 558
            ++    ++ N  A +   +   NIPPH+ +A TPE+AY +D+II KGE  +L D++E + 
Sbjct: 203  NEKTDADVDNNAADQETESTPRNIPPHNPSADTPERAYLIDEIIPKGERAYLLDILEALH 262

Query: 557  SGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIFSYITLLIRF-RNLSKR 381
            SG +            YPSFV NR++KL E+ DE+EK+KLAC+ SYIT L  F   LS  
Sbjct: 263  SGVDL-------DLKPYPSFVSNRLYKLRELQDEEEKEKLACMLSYITHLQSFWERLSSS 315

Query: 380  HKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADLLISYILVLTLYADGF 201
             +KS     +  A++ KIP   + +  RMF D E+  L  +K +LLI YILVLTL+ D F
Sbjct: 316  GRKSKH--HSKPADHSKIPRITYQRLQRMFVDPESHLLSTQKNELLIGYILVLTLFVDNF 373

Query: 200  LTDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALRVPLQLPKLKMKFRR 24
             TD TD+A+DLKM    LRPYY  LGCK      +  +  +V L  PL+ P+L+ + RR
Sbjct: 374  KTDPTDVARDLKMTIQTLRPYYQQLGCK--ISRENFSEQSLVTLPAPLKFPELRRRRRR 430


>XP_006465974.1 PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Citrus
            sinensis] KDO65131.1 hypothetical protein
            CISIN_1g013236mg [Citrus sinensis]
          Length = 447

 Score =  343 bits (879), Expect = e-110
 Identities = 202/434 (46%), Positives = 273/434 (62%), Gaps = 8/434 (1%)
 Frame = -3

Query: 1301 AETEIIPQNDGNIAPSVELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPK 1122
            A T I  Q +  + P   +   ++   E  +K  P+VGYFPS + P       E    PK
Sbjct: 36   ANTTIDEQPEPELEPE-RVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMR--PK 92

Query: 1121 IRVFRN----KQFSNRLQVVVSPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLK 954
            +RV+RN    K  + R+++VVSP++S V+YVGTS+ GEA APQ C YA+GVLD+ T+ LK
Sbjct: 93   VRVYRNMNEKKNRTGRMELVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLK 152

Query: 953  IVPITANKIFRLEPRVRG---VPQVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWE 783
            IVPI ANKIFRLEPRVRG     +   K +++ E + N  A L   +GTK+S R+ +K  
Sbjct: 153  IVPIAANKIFRLEPRVRGSDVADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMH 212

Query: 782  VLLRKEVDPEAQREIESKIEGVEINKEALERVSAE-VGNIPPHDTTATTPEKAYPLDKII 606
              L KE DPE+Q+++  K++ V+INKEALE  +++ V N+PP+D  ATTP++AYPLDKII
Sbjct: 213  A-LNKENDPESQKDLALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKII 271

Query: 605  LKGEWDHLSDVMELMQSGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIF 426
            LKGEWD + D+   + +G+   S       D YPSFVCNRIHKL EI D+ EK+ LA IF
Sbjct: 272  LKGEWDFVQDIFNHVSAGSEVIS-------DAYPSFVCNRIHKLREIQDDVEKQTLASIF 324

Query: 425  SYITLLIRFRNLSKRHKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADL 246
            SYIT L++F++   +H          SA+ H+IP  L  KF+  F+D E+ RL  +K  L
Sbjct: 325  SYITHLVKFKD---QHSMD----GGASAKQHRIPKILHQKFLTSFSDAESKRLSDDKIHL 377

Query: 245  LISYILVLTLYADGFLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALR 66
            LISY+LVLTL+AD F T+ TDIAKDL+M+   LR ++  LGCK        K  +   L 
Sbjct: 378  LISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKLGCKLLRE----KNMLYATLP 433

Query: 65   VPLQLPKLKMKFRR 24
            VPLQ PK   + RR
Sbjct: 434  VPLQFPKAIQRRRR 447


>XP_006426597.1 hypothetical protein CICLE_v10025597mg [Citrus clementina] ESR39837.1
            hypothetical protein CICLE_v10025597mg [Citrus
            clementina]
          Length = 447

 Score =  343 bits (879), Expect = e-110
 Identities = 202/434 (46%), Positives = 273/434 (62%), Gaps = 8/434 (1%)
 Frame = -3

Query: 1301 AETEIIPQNDGNIAPSVELSVTMESFRESSDKIAPVVGYFPSGFDPLKHRMSNEAGDDPK 1122
            A T I  Q +  + P   +   ++   E  +K  P+VGYFPS + P       E    PK
Sbjct: 36   ANTTIDEQPEPELEPE-RVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMR--PK 92

Query: 1121 IRVFRN----KQFSNRLQVVVSPKESKVEYVGTSFLGEATAPQVCTYALGVLDKETKRLK 954
            +RV+RN    K  + R+++VVSP++S V+YVGTS+ GEA APQ C YA+GVLD+ T+ LK
Sbjct: 93   VRVYRNMNEKKNRTGRMELVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLK 152

Query: 953  IVPITANKIFRLEPRVRG---VPQVLNKEDLTEEKKVNNVADLTNVFGTKQSKRRFRKWE 783
            IVPI ANKIFRLEPRVRG     +   K +++ E + N  A L   +GTK+S R+ +K  
Sbjct: 153  IVPIAANKIFRLEPRVRGSDVADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMH 212

Query: 782  VLLRKEVDPEAQREIESKIEGVEINKEALERVSAE-VGNIPPHDTTATTPEKAYPLDKII 606
              L KE DPE+Q+++  K++ V+INKEALE  +++ V N+PP+D  ATTP++AYPLDKII
Sbjct: 213  A-LNKENDPESQKDLALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKII 271

Query: 605  LKGEWDHLSDVMELMQSGANTASAVEFWRTDTYPSFVCNRIHKLGEIGDEDEKKKLACIF 426
            LKGEWD + D+   + +G+   S       D YPSFVCNRIHKL EI D+ EK+ LA IF
Sbjct: 272  LKGEWDFVQDIFNHVSAGSEVIS-------DAYPSFVCNRIHKLREIQDDVEKQTLASIF 324

Query: 425  SYITLLIRFRNLSKRHKKSVPVVPNTSAEYHKIPIALFDKFIRMFADTEADRLPKEKADL 246
            SYIT L++F++   +H          SA+ H+IP  L  KF+  F+D E+ RL  +K  L
Sbjct: 325  SYITHLVKFKD---QHSMD----GGASAKQHRIPKILHQKFLTSFSDAESKRLSDDKIHL 377

Query: 245  LISYILVLTLYADGFLTDITDIAKDLKMAPSYLRPYYVHLGCKCPAGAHSLKKSVVVALR 66
            LISY+LVLTL+AD F T+ TDIAKDL+M+   LR ++  LGCK        K  +   L 
Sbjct: 378  LISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKLGCKLLRE----KNMLYATLP 433

Query: 65   VPLQLPKLKMKFRR 24
            VPLQ PK   + RR
Sbjct: 434  VPLQFPKAIQRRRR 447