BLASTX nr result
ID: Magnolia22_contig00002550
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00002550
(2315 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010278441.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 641 0.0
XP_008805674.1 PREDICTED: RNA polymerase sigma factor sigB [Phoe... 628 0.0
XP_010251515.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 623 0.0
XP_010918654.1 PREDICTED: RNA polymerase sigma factor sigB [Elae... 622 0.0
JAT59858.1 RNA polymerase sigma factor rpoD [Anthurium amnicola] 610 0.0
XP_010943391.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 608 0.0
XP_010661180.1 PREDICTED: RNA polymerase sigma factor sigB [Viti... 608 0.0
XP_015895073.1 PREDICTED: RNA polymerase sigma factor sigB [Zizi... 607 0.0
XP_017977747.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 604 0.0
XP_017977746.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 597 0.0
XP_012070322.1 PREDICTED: RNA polymerase sigma factor sigB [Jatr... 595 0.0
XP_015577773.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 590 0.0
XP_015577772.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 590 0.0
XP_017627350.1 PREDICTED: RNA polymerase sigma factor sigB [Goss... 588 0.0
XP_009398609.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 587 0.0
EOY10370.1 RNApolymerase sigma subunit 2 [Theobroma cacao] 583 0.0
OAY44509.1 hypothetical protein MANES_08G156300 [Manihot esculenta] 581 0.0
XP_011623893.1 PREDICTED: RNA polymerase sigma factor sigB [Ambo... 580 0.0
XP_018817643.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 580 0.0
OMP03365.1 RNA polymerase sigma-70 [Corchorus capsularis] 579 0.0
>XP_010278441.1 PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 641 bits (1654), Expect = 0.0
Identities = 359/582 (61%), Positives = 396/582 (68%), Gaps = 15/582 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPP--------LHLKAREPVCFR-QCVSSSTTA-----V 314
MACLLPQF KC DT ++HF+ LKAR+ +CFR QC+ S+TTA V
Sbjct: 1 MACLLPQF-KCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTV 59
Query: 315 IGVDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXX 494
+ + LR+PSLE S A RPLTY+GAI PP K+ FEATLA+E LITG
Sbjct: 60 VDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAV 119
Query: 495 XXXXXXXXXXXXXXXXXXXXGTSPLLKSEK-PEDFPSEADIXXXXXXXXXXXXXVVTTGH 671
T+P KS+K P D PSE D V H
Sbjct: 120 EAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHH 179
Query: 672 STPADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXX 851
S A+++P+E D++ +PTD IAVRSGRQT
Sbjct: 180 SLGAESRPKE---------DSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAA 230
Query: 852 XXXXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDX 1031
V++VKSGS+ RKKRS++QD+DYSDPLRY IQD
Sbjct: 231 EKVAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDL 290
Query: 1032 XXXXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIA 1211
RYGGQPTFAQWAAAAGIDQKTLRKRLNYGI CKDKMIKSNIRLVISIA
Sbjct: 291 LKLEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIA 350
Query: 1212 KNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 1391
KNYQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR
Sbjct: 351 KNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 410
Query: 1392 LPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKI 1571
LPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKI
Sbjct: 411 LPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKI 470
Query: 1572 GINQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMK 1751
GINQNLKPSEVIADPDAET+E++L+K+FMK+DL+KVLDSLNPREKQVIRWRFGLEDGRMK
Sbjct: 471 GINQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMK 530
Query: 1752 TLQEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
TLQEIGELMGVSRERIRQIESCAF QYL+S
Sbjct: 531 TLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKNLQQYLIS 572
>XP_008805674.1 PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
Length = 566
Score = 628 bits (1619), Expect = 0.0
Identities = 346/572 (60%), Positives = 393/572 (68%), Gaps = 5/572 (0%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRA----PPLHLKAREPVCFRQ-CVSSSTTAVIGVDNLRLP 341
MACL+PQF KCPS + HFR P L+ KAR+ VCFR CVS+ T AVI + R+P
Sbjct: 1 MACLVPQF-KCPSISPDAHFRPLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQ--RIP 57
Query: 342 SLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXX 521
SLE STS A RPLTY+GA+GPP K++ EATLA+E L+TG
Sbjct: 58 SLEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAA 117
Query: 522 XXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEE 701
G P +K EK EDF SEAD + TT +STP DT+P E
Sbjct: 118 VEVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHE 177
Query: 702 ENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISV 881
A+ ++ T+ SN T IAVRSGRQT +VI V
Sbjct: 178 ---AKDPSQGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPV 234
Query: 882 KSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXX 1061
KSGST +KKRS+ Q++DYSDPLRY IQD
Sbjct: 235 KSGSTSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEELELSEAIQDMLKLERLQQEL 294
Query: 1062 XXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNL 1241
R+GGQPTFAQWAAAAG+DQ+TLRKRLNYG CKDKMIKSNIRLVISIAKNYQGAGMNL
Sbjct: 295 AERHGGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKSNIRLVISIAKNYQGAGMNL 354
Query: 1242 QDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 1421
QDLVQEGCRGLV+G+EKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATY
Sbjct: 355 QDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATY 414
Query: 1422 RVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSE 1601
RVREA+KQLYSENGR+PD +EVAEATGLSMKRL AV+LTPKAPRSLDQKIGINQ+LKPSE
Sbjct: 415 RVREAKKQLYSENGRYPDYQEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSE 474
Query: 1602 VIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMG 1781
VIADP+AETSE++LIKQF K+DL+KVLD+LNPREKQV+RWRFGLEDG KTLQEIGELMG
Sbjct: 475 VIADPEAETSEEILIKQFRKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMG 534
Query: 1782 VSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
VSRERIRQIES AF QY++S
Sbjct: 535 VSRERIRQIESSAFRKLKNKKRTRHLQQYVIS 566
>XP_010251515.1 PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 623 bits (1607), Expect = 0.0
Identities = 345/584 (59%), Positives = 392/584 (67%), Gaps = 18/584 (3%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPL-----------HLKAREPVCFR-QCVSSSTTA--- 311
MACLLPQF KC DT ++HFR L H K+R+ + F+ QCV S+TT
Sbjct: 1 MACLLPQF-KCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMT 59
Query: 312 --VIGVDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXX 485
++ V+ LR+PSLE S S A+ RPL+Y+GA GPP K++FEATLA E LITG
Sbjct: 60 TTLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAA 119
Query: 486 XXXXXXXXXXXXXXXXXXXXXXXGTSPLLKSEK-PEDFPSEADIXXXXXXXXXXXXXVVT 662
+SE P DF SE+ I V
Sbjct: 120 AAAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGR 179
Query: 663 TGHSTPADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXX 842
HS +++ EEE Q S KD++ + +D IAVRSGRQT
Sbjct: 180 IDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRA 239
Query: 843 XXXXXXXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXI 1022
V+SVKSG + RK+R+++QDIDYSDPLRY I
Sbjct: 240 RAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGI 299
Query: 1023 QDXXXXXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVI 1202
QD R GGQPTFAQWAAAAG+DQKTLRKRLNYGI CKDKMIKSNIRLVI
Sbjct: 300 QDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 359
Query: 1203 SIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 1382
SIAKNYQGAGMNLQDLVQEGCRGLV+G+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 360 SIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 419
Query: 1383 TIRLPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLD 1562
TIRLPFHMVEATYRVREA+KQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAP SLD
Sbjct: 420 TIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLD 479
Query: 1563 QKIGINQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDG 1742
QKIG+NQ++KPSE+IADPDAET+E++LIKQFMK+DL+KVLDSLNPREKQVIRWRFG+EDG
Sbjct: 480 QKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 539
Query: 1743 RMKTLQEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLL 1874
RMKTLQEIGELMGVSRERIRQIESCAF QY++
Sbjct: 540 RMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKNLQQYVI 583
>XP_010918654.1 PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
Length = 566
Score = 622 bits (1605), Expect = 0.0
Identities = 343/572 (59%), Positives = 391/572 (68%), Gaps = 5/572 (0%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRA----PPLHLKAREPVCFR-QCVSSSTTAVIGVDNLRLP 341
MACL+PQF KCPS + HFR+ P L+ KAR+ VCFR QCVS+ T AVI + R+P
Sbjct: 1 MACLVPQF-KCPSISPEAHFRSVSHLPSLNSKARDSVCFRSQCVSTQTAAVIDIQ--RIP 57
Query: 342 SLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXX 521
SLE +S S RPLTY+G++GPP K+ EATLA+E L+TG
Sbjct: 58 SLEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETLLTGEEAVVAAAAAEAVALARAA 117
Query: 522 XXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEE 701
P +K EK EDF SEAD + TT HSTP DT+P E
Sbjct: 118 VEVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTHHSTPTDTEPHE 177
Query: 702 ENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISV 881
A+ ++D + SN T+N IAVRSGRQT +VI +
Sbjct: 178 ---AKDPSQDIDVSNLTNNELQSQQMQYPESIAVRSGRQTERKARRARAEEKAAVSVIPI 234
Query: 882 KSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXX 1061
KSGS+ +KKRS+ Q+IDYSDPL Y IQD
Sbjct: 235 KSGSSSKKKRSAFQEIDYSDPLHYLRGTTSTSKLLTAAEELELSKGIQDLLKLEKLREEL 294
Query: 1062 XXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNL 1241
R+GGQPTFAQWAAAAG+DQ+TLRKRLNYG CKDKMIKSNIRLVISIAKNYQGAGMNL
Sbjct: 295 AERHGGQPTFAQWAAAAGVDQRTLRKRLNYGGFCKDKMIKSNIRLVISIAKNYQGAGMNL 354
Query: 1242 QDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 1421
QDLVQEGCRGLV+G+E+FDA KGFKFSTYAHWWIKQAVR+SLS+QSRTIRLP HMVEATY
Sbjct: 355 QDLVQEGCRGLVKGAERFDALKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPIHMVEATY 414
Query: 1422 RVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSE 1601
RVREA+KQLYSENGRHPD EEVAEATGLSMKRL AV+LTPKAPRSLDQKIGINQ+LKPSE
Sbjct: 415 RVREAKKQLYSENGRHPDYEEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSE 474
Query: 1602 VIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMG 1781
VIADP AETSE++LIKQFMK+DL+KVLD+LNPREKQV+RWRFGLEDG KTLQEIGELMG
Sbjct: 475 VIADPKAETSEEILIKQFMKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMG 534
Query: 1782 VSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
VSRERIRQIES AF QY++S
Sbjct: 535 VSRERIRQIESSAFRKLKSKKRTRHLQQYVIS 566
>JAT59858.1 RNA polymerase sigma factor rpoD [Anthurium amnicola]
Length = 563
Score = 610 bits (1574), Expect = 0.0
Identities = 335/568 (58%), Positives = 376/568 (66%), Gaps = 1/568 (0%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHLKAREPVCFR-QCVSSSTTAVIGVDNLRLPSLED 353
M+CL PQF K P D HF P KAR+ VCFR QCV SS T V + L++ +LE
Sbjct: 1 MSCLAPQF-KRPPDA---HFSIRPSQAKARDIVCFRGQCVMSSATMVC-TERLQISTLES 55
Query: 354 QSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXXXXXX 533
S S AVRPL Y+GA+GPPA+ FE LA+E L+
Sbjct: 56 HSASVTAVRPLPYVGAVGPPAEMDFEVALATENLLKDEESVIAAAAAEAVALARAAAEVA 115
Query: 534 XXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEEENVA 713
G P K +K +DFPS + T S + P+ + ++
Sbjct: 116 KDAAQMVGMLPSQKLDKSDDFPSNLSFLRLETSRLIQNGHLATFKSSATTEGWPDGDQIS 175
Query: 714 QLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISVKSGS 893
Q +KD NS+ N IA+RSGRQ ISVKSGS
Sbjct: 176 QFLSKDAHNSSSKGNDVKHLETQHSKNIAIRSGRQNERKARRARVAEKAATGAISVKSGS 235
Query: 894 TPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXXXXRY 1073
+ RKKR ++Q+IDYSDPL Y IQD RY
Sbjct: 236 SGRKKRGALQEIDYSDPLYYLRATTCTSRLLTATEELELSEGIQDLLKLEKLQEELAERY 295
Query: 1074 GGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 1253
GGQPTFAQWAAAAG+DQKTLRKRLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNL DLV
Sbjct: 296 GGQPTFAQWAAAAGVDQKTLRKRLNYGMFCKDKMIKSNIRLVISIAKNYQGAGMNLPDLV 355
Query: 1254 QEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVRE 1433
QEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSL+DQSRTIRLPFHMVEATYRVRE
Sbjct: 356 QEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLTDQSRTIRLPFHMVEATYRVRE 415
Query: 1434 ARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIAD 1613
ARKQLYSENGR+PDN+EVAEATGLSMK+LT VLLTPKAPRSLDQK+GINQNLKPSEVIA+
Sbjct: 416 ARKQLYSENGRYPDNKEVAEATGLSMKKLTTVLLTPKAPRSLDQKVGINQNLKPSEVIAN 475
Query: 1614 PDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRE 1793
PDAET+ED+L+KQFMK+DLDKVLDSLNPREKQV+RWRFGLEDGRMKTLQEIGELMGVSRE
Sbjct: 476 PDAETAEDILMKQFMKQDLDKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRE 535
Query: 1794 RIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
RIRQIESCAF QYL+S
Sbjct: 536 RIRQIESCAFRKLKNKSRTKSLRQYLVS 563
>XP_010943391.1 PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
Length = 555
Score = 608 bits (1569), Expect = 0.0
Identities = 341/572 (59%), Positives = 388/572 (67%), Gaps = 5/572 (0%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRA----PPLHLKAREPVCFR-QCVSSSTTAVIGVDNLRLP 341
MACL+PQF KCPS ++ HFR+ P L+ KAR+ VCFR QCVS+ T AVI ++++
Sbjct: 1 MACLVPQF-KCPSMSSDAHFRSLSHHPSLNSKARDSVCFRSQCVSTPTAAVIDMEHIL-- 57
Query: 342 SLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXX 521
SLE +STS AA RPLTY+GAIGPP K+ EATLA+E L+TG
Sbjct: 58 SLEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTA 117
Query: 522 XXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEE 701
P +K EK DF SEADI + ST DT+P E
Sbjct: 118 VEAAKDAALTIANDPSVKLEKSLDFSSEADI--------------LQLERSTATDTKPHE 163
Query: 702 ENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISV 881
E++A+ ++D + SN N IAVRSGRQT +VI V
Sbjct: 164 EHLAKDPSQDVDISNLIHNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPV 223
Query: 882 KSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXX 1061
KSGS+ +KKRS+ Q+IDYSDPLRY IQD
Sbjct: 224 KSGSSSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEELELSEGIQDLLKLERLREEL 283
Query: 1062 XXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNL 1241
R G QPT AQWAAAAG+DQ+TLRKRLNYG CKDKMI SNIRLVISIAKNYQGAGMNL
Sbjct: 284 EERNGAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITSNIRLVISIAKNYQGAGMNL 343
Query: 1242 QDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY 1421
QDLVQEGCRGLV+G+EKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATY
Sbjct: 344 QDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATY 403
Query: 1422 RVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSE 1601
RVR+A KQLY+ENGRHPD EE+AEATGLSMKRL AV+L PKAPRSLDQKIGINQ+LKPSE
Sbjct: 404 RVRQAEKQLYNENGRHPDYEEIAEATGLSMKRLNAVMLIPKAPRSLDQKIGINQSLKPSE 463
Query: 1602 VIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMG 1781
VIADP AETSE++LIKQFMK+DL+KVL+SLNPREKQVIRWRFGLEDG KTLQEIGELMG
Sbjct: 464 VIADPKAETSEEILIKQFMKQDLNKVLNSLNPREKQVIRWRFGLEDGMTKTLQEIGELMG 523
Query: 1782 VSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
VSRERIRQIES AF QY+ S
Sbjct: 524 VSRERIRQIESNAFRKLKSKKRTKNLQQYVNS 555
>XP_010661180.1 PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
CBI40014.3 unnamed protein product, partial [Vitis
vinifera]
Length = 575
Score = 608 bits (1568), Expect = 0.0
Identities = 341/579 (58%), Positives = 386/579 (66%), Gaps = 12/579 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHL--KAREPVCFR-QC--------VSSSTTAVIGV 323
M+CLLPQF KCP DT + H P LH+ K RE + FR QC +S+STTAV+ +
Sbjct: 1 MSCLLPQF-KCPPDTFSTH---PKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDI 56
Query: 324 DNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXX 503
+ LRLPSLE S S AA RP TY+G +GPP ++ FEATLA E L+T
Sbjct: 57 EKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAV 116
Query: 504 XXXXXXXXXXXXXXXXXGTSPLLKSE-KPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTP 680
G + KSE KP F S D + G S
Sbjct: 117 ALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVG 176
Query: 681 ADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXX 860
A+T + N Q T+D+++ PT I VRS RQ
Sbjct: 177 AETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKA 236
Query: 861 XXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXX 1040
V+SV+SGST R+KR S+Q++DYSDPLRY IQD
Sbjct: 237 SAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKL 296
Query: 1041 XXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNY 1220
R+G +PTFAQWAAAAG+DQKTLR+R NYGIRCKDKMIKSNIRLVISIAKNY
Sbjct: 297 EKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNY 356
Query: 1221 QGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 1400
QGAGMN+QDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF
Sbjct: 357 QGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 416
Query: 1401 HMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGIN 1580
HMVEATYRV+EARKQLYSENGRHP+NEEVAEATGLSMKRL AVLLTPKAPRSLDQKIGIN
Sbjct: 417 HMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGIN 476
Query: 1581 QNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQ 1760
QNLKPSEVIADPDAET+E++LIKQFM++DL+KVL+SLNPREKQVIRWR+GLEDGR KTLQ
Sbjct: 477 QNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQ 536
Query: 1761 EIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
EIGELMGVSRERIRQIESCAF QYL+S
Sbjct: 537 EIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575
>XP_015895073.1 PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
Length = 573
Score = 607 bits (1564), Expect = 0.0
Identities = 340/577 (58%), Positives = 381/577 (66%), Gaps = 10/577 (1%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHL-KAREPVC-FRQCV--------SSSTTAVIGVD 326
M+CLLPQF KC DT ++HFR HL K R+ + + C+ S +TT V+ ++
Sbjct: 1 MSCLLPQF-KCQPDTFSIHFRT---HLPKPRDSISSWPHCILSTSSPSTSMATTTVLNLE 56
Query: 327 NLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXX 506
LRLPSL+ S S A RP TY GAIGPPAK+ EATLA+E L+T
Sbjct: 57 KLRLPSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAAAEAVT 116
Query: 507 XXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPAD 686
+P ++E F E D V G S
Sbjct: 117 LAKAAVKVAKDATLLINNNPCTRAESTSLFSPEDDALHLKWPQHMKTGQPVRLGDSMGPK 176
Query: 687 TQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXX 866
T ++ Q + K+ ++ PT IAVRS RQT
Sbjct: 177 TAQLDDYSMQCAIKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARRTRAAEKAAA 236
Query: 867 TVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXX 1046
TV+SVKSGST RKKR+S+QDID+SDPLRY IQD
Sbjct: 237 TVVSVKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEGIQDLLKLEK 296
Query: 1047 XXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQG 1226
R G QPTFAQWAAAAG+DQKTLR+R+NYGI CKDKMIKSNIRLVISIAKNYQG
Sbjct: 297 LQEELTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLVISIAKNYQG 356
Query: 1227 AGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 1406
AGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM
Sbjct: 357 AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 416
Query: 1407 VEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQN 1586
VEATYRV+EARKQLYS+NGRHPD+EEVAEATGLSMKRL AVLLTPKAPRSL+QKIGINQN
Sbjct: 417 VEATYRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQN 476
Query: 1587 LKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEI 1766
LKPSEVIADPDAETSEDVLI++FMK+DLDKVLDSLNPREKQVIRWRFG+EDGRMKTLQEI
Sbjct: 477 LKPSEVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMEDGRMKTLQEI 536
Query: 1767 GELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
GELMGVSRERIRQIESCAF QYL+S
Sbjct: 537 GELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLVS 573
>XP_017977747.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
cacao]
Length = 579
Score = 604 bits (1557), Expect = 0.0
Identities = 338/580 (58%), Positives = 381/580 (65%), Gaps = 10/580 (1%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLH-LKAREPVCFR-QCVSSST--------TAVIGVD 326
M+CLLPQF KC DT ++ FR H K +E +CFR QCV S+T TAV+ V+
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLDVE 59
Query: 327 NLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXX 506
LRLPS E S A RP TY+GA GPP++++ ATLA++ L+T
Sbjct: 60 KLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAIIAAAAAEAVA 119
Query: 507 XXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPAD 686
K+E D G S +
Sbjct: 120 LARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDE 179
Query: 687 TQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXX 866
++ EE++ Q ST +++ PT+ IAVRS RQT
Sbjct: 180 SEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAA 239
Query: 867 TVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXX 1046
V+SVKSGST RK+R ++QD+DYSDPLRY IQD
Sbjct: 240 NVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLER 299
Query: 1047 XXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQG 1226
R GGQPTFAQWAAAAG+DQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQG
Sbjct: 300 LQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQG 359
Query: 1227 AGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 1406
AGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM
Sbjct: 360 AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 419
Query: 1407 VEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQN 1586
VEATYRV+EARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQN
Sbjct: 420 VEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQN 479
Query: 1587 LKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEI 1766
LKPSEVIADP+AET+ED+LIKQFM+KDL+KVLDSL+ RE+QVIRWRFG+EDGRMKTLQEI
Sbjct: 480 LKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEI 539
Query: 1767 GELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS*AS 1886
GELMGVSRERIRQIESCAF QYLLS AS
Sbjct: 540 GELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLSYAS 579
>XP_017977746.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
cacao]
Length = 586
Score = 597 bits (1540), Expect = 0.0
Identities = 338/587 (57%), Positives = 381/587 (64%), Gaps = 17/587 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLH-LKAREPVCFR-QCVSSST--------TAVIGVD 326
M+CLLPQF KC DT ++ FR H K +E +CFR QCV S+T TAV+ V+
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLDVE 59
Query: 327 NLRLPSLEDQSTSSAAVRPLTYLGAIGPPA-------KSTFEATLASELLITGXXXXXXX 485
LRLPS E S A RP TY+GA GPP+ +++ ATLA++ L+T
Sbjct: 60 KLRLPSFEAHPNSVAVDRPWTYIGATGPPSEVSLLRLRASLGATLATDNLLTSDEAIIAA 119
Query: 486 XXXXXXXXXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTT 665
K+E D
Sbjct: 120 AAAEAVALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGII 179
Query: 666 GHSTPADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXX 845
G S +++ EE++ Q ST +++ PT+ IAVRS RQT
Sbjct: 180 GDSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTR 239
Query: 846 XXXXXXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQ 1025
V+SVKSGST RK+R ++QD+DYSDPLRY IQ
Sbjct: 240 AAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQ 299
Query: 1026 DXXXXXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVIS 1205
D R GGQPTFAQWAAAAG+DQKTLR RLNYG+ CKDKMIKSNIRLVIS
Sbjct: 300 DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVIS 359
Query: 1206 IAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 1385
IAKNYQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 360 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 419
Query: 1386 IRLPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 1565
IRLPFHMVEATYRV+EARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ
Sbjct: 420 IRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 479
Query: 1566 KIGINQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGR 1745
KIGINQNLKPSEVIADP+AET+ED+LIKQFM+KDL+KVLDSL+ RE+QVIRWRFG+EDGR
Sbjct: 480 KIGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGR 539
Query: 1746 MKTLQEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS*AS 1886
MKTLQEIGELMGVSRERIRQIESCAF QYLLS AS
Sbjct: 540 MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLSYAS 586
>XP_012070322.1 PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
XP_012070323.1 PREDICTED: RNA polymerase sigma factor
sigB [Jatropha curcas] KDP39610.1 hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 595 bits (1534), Expect = 0.0
Identities = 335/580 (57%), Positives = 384/580 (66%), Gaps = 13/580 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLH-------LKAREPVCFR-QCVSSST-----TAVI 317
M+CLLPQF KC DT ++HFR L K+REPVCFR QC+ S+T TAV+
Sbjct: 1 MSCLLPQF-KCQPDTFSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTSPSTSTAVL 59
Query: 318 GVDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXX 497
++ LRLPS E S A P TY+G+IGPP K TF +TLA+E LITG
Sbjct: 60 DLEKLRLPSFEAHPDSLVANSPWTYVGSIGPP-KETFGSTLATETLITGDDAVIAAAAAE 118
Query: 498 XXXXXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHST 677
+ P ++E + PS AD+ + G S
Sbjct: 119 AVALARAAAKVAKDAAILVKSFPSSEAESKLEIPSIADVSSRWPQFTETDRARII-GDSV 177
Query: 678 PADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXX 857
A+T EE+ Q TK++++ PT IAVRS RQT
Sbjct: 178 TAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAAEK 237
Query: 858 XXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXX 1037
V+S KSGST +KKR +Q++DYSDPLRY IQD
Sbjct: 238 AAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDLLK 297
Query: 1038 XXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKN 1217
R GGQPTF QWAAAAG+DQKTLR RLNYGI CKD+MIKSNIRLVISIAKN
Sbjct: 298 LERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIAKN 357
Query: 1218 YQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1397
YQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 417
Query: 1398 FHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGI 1577
FHMVEATYRV+EARKQLYSENGR+PD+EEVAEATGLSMKRL+AVLLTPKAPRSLDQKIGI
Sbjct: 418 FHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGI 477
Query: 1578 NQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTL 1757
N +LKPSE+IADPDAET+ED+L+KQFMK+DL+KVLDSL+PRE QVIRWRFGLEDGR+KTL
Sbjct: 478 NMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIKTL 537
Query: 1758 QEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
QEIGE+MGVSRERIRQIES AF QYL++
Sbjct: 538 QEIGEIMGVSRERIRQIESSAFRKLKKKKRTKQLKQYLVA 577
>XP_015577773.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Ricinus
communis]
Length = 578
Score = 590 bits (1522), Expect = 0.0
Identities = 329/580 (56%), Positives = 382/580 (65%), Gaps = 13/580 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHL-------KAREPVCFR-QCVSSST-----TAVI 317
M+CLLPQF KC DT ++HFRA H K+REP+ +R QC+ S+T TAV+
Sbjct: 2 MSCLLPQF-KCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVL 60
Query: 318 GVDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXX 497
++ LRLPS E S S A P TY+ AIGPP ++TF +TLA+E LIT
Sbjct: 61 DLEKLRLPSFEAPSDSIAPNSPWTYVRAIGPPKEATFGSTLATETLITSDEAVIAAAAAE 120
Query: 498 XXXXXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHST 677
P ++E PS D ++ G S
Sbjct: 121 AVALARAAVKVAKDAALLVKNFPSAETESKLTSPSTIDASRWPQFTETERARII--GDSV 178
Query: 678 PADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXX 857
+T P EE+ Q S K+++ T IAVRS RQT
Sbjct: 179 ATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEK 238
Query: 858 XXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXX 1037
+V+SVK GST +KKR S+Q++DYSDPLRY IQD
Sbjct: 239 AASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLK 298
Query: 1038 XXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKN 1217
RYGGQPTFAQWAAAAG+DQ+TLRKR+N+G CKDKMIKSNIRLVISIAKN
Sbjct: 299 LERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKN 358
Query: 1218 YQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1397
YQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 359 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 418
Query: 1398 FHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGI 1577
FHMVEATYRV+EARKQLYSENGRHPD+EEVAEA GLSMKRL+AVLLTPKAPRSLDQKIG+
Sbjct: 419 FHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGM 478
Query: 1578 NQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTL 1757
N +LKPSEVIADP+AET+E++L+KQFMK+DL+KVL++LNPRE QV+RWRFGLEDGRMKTL
Sbjct: 479 NMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTL 538
Query: 1758 QEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
QEIGE+MGVSRERIRQIES AF QYLL+
Sbjct: 539 QEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 578
>XP_015577772.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Ricinus
communis]
Length = 579
Score = 590 bits (1521), Expect = 0.0
Identities = 329/581 (56%), Positives = 382/581 (65%), Gaps = 14/581 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHL--------KAREPVCFR-QCVSSST-----TAV 314
M+CLLPQF KC DT ++HFRA H K+REP+ +R QC+ S+T TAV
Sbjct: 2 MSCLLPQF-KCQPDTFSIHFRANYFHFSNVTQSTAKSREPIYYRAQCILSTTSPSTSTAV 60
Query: 315 IGVDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXX 494
+ ++ LRLPS E S S A P TY+ AIGPP ++TF +TLA+E LIT
Sbjct: 61 LDLEKLRLPSFEAPSDSIAPNSPWTYVRAIGPPKEATFGSTLATETLITSDEAVIAAAAA 120
Query: 495 XXXXXXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHS 674
P ++E PS D ++ G S
Sbjct: 121 EAVALARAAVKVAKDAALLVKNFPSAETESKLTSPSTIDASRWPQFTETERARII--GDS 178
Query: 675 TPADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXX 854
+T P EE+ Q S K+++ T IAVRS RQT
Sbjct: 179 VATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVE 238
Query: 855 XXXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXX 1034
+V+SVK GST +KKR S+Q++DYSDPLRY IQD
Sbjct: 239 KAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLL 298
Query: 1035 XXXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAK 1214
RYGGQPTFAQWAAAAG+DQ+TLRKR+N+G CKDKMIKSNIRLVISIAK
Sbjct: 299 KLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAK 358
Query: 1215 NYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 1394
NYQGAGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL
Sbjct: 359 NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 418
Query: 1395 PFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIG 1574
PFHMVEATYRV+EARKQLYSENGRHPD+EEVAEA GLSMKRL+AVLLTPKAPRSLDQKIG
Sbjct: 419 PFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIG 478
Query: 1575 INQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKT 1754
+N +LKPSEVIADP+AET+E++L+KQFMK+DL+KVL++LNPRE QV+RWRFGLEDGRMKT
Sbjct: 479 MNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKT 538
Query: 1755 LQEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
LQEIGE+MGVSRERIRQIES AF QYLL+
Sbjct: 539 LQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 579
>XP_017627350.1 PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
KHG18437.1 RNA polymerase sigma factor rpoD [Gossypium
arboreum]
Length = 578
Score = 588 bits (1515), Expect = 0.0
Identities = 331/579 (57%), Positives = 375/579 (64%), Gaps = 9/579 (1%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLH-LKAREPVCFR-QCV-------SSSTTAVIGVDN 329
M+CLLPQF KC DT ++ FRA H K +E +CFR QCV S++TTAV+ V+
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSTATTAVLDVEK 59
Query: 330 LRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXX 509
LRLPS E S S RP TY GA GPP++++F ATLA+E L+T
Sbjct: 60 LRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAVAL 119
Query: 510 XXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADT 689
K+E S D G +
Sbjct: 120 ARAAAKVAKDAAIMVKNHSSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSDEL 179
Query: 690 QPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXT 869
+ EE++ Q STK+++ PT+ IAVRS RQ
Sbjct: 180 EMEEDDFEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTRAAEKAATN 239
Query: 870 VISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXX 1049
V+SVKSGST RK+R ++QDIDYSDPLRY IQD
Sbjct: 240 VVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEVL 299
Query: 1050 XXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGA 1229
R G PTFAQWAAAA +D+KTLR+RLNYG CKDKMIKSNIRLVISIAKNYQGA
Sbjct: 300 HEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVISIAKNYQGA 359
Query: 1230 GMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 1409
GMNLQDLVQEGCRGL+RG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV
Sbjct: 360 GMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 419
Query: 1410 EATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNL 1589
EATYRV+EARKQLYSENGR PDN EVAEATGLSMKRLTAVLL PKAPRSLDQKIGINQNL
Sbjct: 420 EATYRVKEARKQLYSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNL 479
Query: 1590 KPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIG 1769
KPSEVIADP+A+++ED+L+KQFMKKDL+KVLDSL+PRE+QVIRWRFG+EDGRMKTLQEIG
Sbjct: 480 KPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGRMKTLQEIG 539
Query: 1770 ELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS*AS 1886
E MGVSRERIRQIE CAF QYLLS AS
Sbjct: 540 ESMGVSRERIRQIELCAFRKLKNKRRTKHLQQYLLSYAS 578
>XP_009398609.1 PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
subsp. malaccensis]
Length = 567
Score = 587 bits (1513), Expect = 0.0
Identities = 332/570 (58%), Positives = 380/570 (66%), Gaps = 3/570 (0%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHLKAREPVCFR-QCVSSSTTAVIGVDNLRLPSLED 353
MACL+PQF K PS + P LH +ARE VCFR +CV S TTAVI + ++P LE
Sbjct: 1 MACLVPQF-KPPSSDSLARPSLPSLHPRAREFVCFRSRCVLSPTTAVIDFE--QIPKLEA 57
Query: 354 QSTSSA--AVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXXXX 527
STSS+ A+RPLTY G++GPP K++ EATLASE L+
Sbjct: 58 HSTSSSTCAIRPLTYSGSVGPPIKTSIEATLASETLLQCDEAVIAAAAAEAVALARAALE 117
Query: 528 XXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEEEN 707
G + + EK E+ PSEADI T H +T P E N
Sbjct: 118 LAKDAAQMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIPFEYN 177
Query: 708 VAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISVKS 887
V+ T+ S+ T + IAVRSGRQ VIS+KS
Sbjct: 178 VSLDQYASTDISSSTFDEPEFQGMQHIENIAVRSGRQIERRARRARAADKATAGVISLKS 237
Query: 888 GSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXXXX 1067
GS+ +KKRS+ Q+IDYSDPLRY IQ
Sbjct: 238 GSSGKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEEIELSEGIQSLLKLERLQQDLAE 297
Query: 1068 RYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNLQD 1247
R G QPTFAQWAAAAGIDQKTLRKR+N+G CKDKMIKSNIRLVISIAKNYQGAG+NLQD
Sbjct: 298 RNGCQPTFAQWAAAAGIDQKTLRKRINHGTYCKDKMIKSNIRLVISIAKNYQGAGINLQD 357
Query: 1248 LVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV 1427
LVQEGCRGLV+G+EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRV
Sbjct: 358 LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRV 417
Query: 1428 REARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVI 1607
REA+K+LYSENGRHPDNEEVAEA GLSMKRL AV+LTPKAPRSLDQKIGINQ+LK SEVI
Sbjct: 418 REAKKKLYSENGRHPDNEEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGINQSLKASEVI 477
Query: 1608 ADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVS 1787
ADP A+TSED+L+KQFM++DL+KVLD+LN REKQV+RWRFGL+DGRMKTLQEIGELMGVS
Sbjct: 478 ADPAAKTSEDILMKQFMREDLNKVLDTLNLREKQVVRWRFGLDDGRMKTLQEIGELMGVS 537
Query: 1788 RERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
RERIRQIESCAF QY++S
Sbjct: 538 RERIRQIESCAFRKLKSKKRTKNLRQYIIS 567
>EOY10370.1 RNApolymerase sigma subunit 2 [Theobroma cacao]
Length = 623
Score = 583 bits (1503), Expect = 0.0
Identities = 338/624 (54%), Positives = 381/624 (61%), Gaps = 54/624 (8%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLH---------------------------------- 254
M+CLLPQF KC DT ++ FR H
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIF 59
Query: 255 ---LKAREPVCFR-QCVSSST--------TAVIGVDNLRLPSLEDQSTSSAAVRPLTYLG 398
K +E +CFR QCV S+T TAV+ V+ LRLPS E S A RP TY+G
Sbjct: 60 VVLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIG 119
Query: 399 AIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSPLLKS 578
A GPP++++ ATLA++ L+T K+
Sbjct: 120 ATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKT 179
Query: 579 EKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEEENVAQLSTKDTENSNPTDN 758
E D G S +++ EE++ Q ST +++ PT+
Sbjct: 180 EMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNE 239
Query: 759 XXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISVKSGSTPRKKRSSIQDIDYS 938
IAVRS RQT V+SVKSGST RK+R ++QD+DYS
Sbjct: 240 ELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYS 299
Query: 939 DPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXXXXRYGGQPTFAQWAAAAGI 1118
DPLRY IQD R GGQPTFAQWAAAAG+
Sbjct: 300 DPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGV 359
Query: 1119 DQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFD 1298
DQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG+EKFD
Sbjct: 360 DQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 419
Query: 1299 ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDN 1478
ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGRHPDN
Sbjct: 420 ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDN 479
Query: 1479 EEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPS--------EVIADPDAETSE 1634
EEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPS EVIADP+AET+E
Sbjct: 480 EEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAE 539
Query: 1635 DVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 1814
D+LIKQFM+KDL+KVLDSL+ RE+QVIRWRFG+EDGRMKTLQEIGELMGVSRERIRQIES
Sbjct: 540 DMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIES 599
Query: 1815 CAFXXXXXXXXXXXXXQYLLS*AS 1886
CAF QYLLS AS
Sbjct: 600 CAFRKLKNKKRTKHLQQYLLSYAS 623
>OAY44509.1 hypothetical protein MANES_08G156300 [Manihot esculenta]
Length = 579
Score = 581 bits (1498), Expect = 0.0
Identities = 325/580 (56%), Positives = 377/580 (65%), Gaps = 13/580 (2%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLHLK-------AREPVCFR-QCVSSST----TAVIG 320
M+CLLPQF KC DT +++F+ H R+P+CFR QC+ SST TAV+
Sbjct: 1 MSCLLPQF-KCQPDTFSIYFKTNHFHNPNFSQSPAKRDPICFRAQCILSSTSSTSTAVLD 59
Query: 321 VDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXX 500
++ LRLPS E S S AA P TYLGAIGP + TF + LA+E LIT
Sbjct: 60 LEKLRLPSFEAHSDSVAANSPWTYLGAIGPRKEETFRSNLATETLITSDEAVIAAAAAEA 119
Query: 501 XXXXXXXXXXXXXXXXXXGTSPLLKSEKPEDFP-SEADIXXXXXXXXXXXXXVVTTGHST 677
+SP ++E P S AD G S
Sbjct: 120 VALARAAVKFAKEAATLVKSSPSAETESKLATPQSTADALSSRLPQFTETERACILGDSV 179
Query: 678 PADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXX 857
A+T EE Q K++++ PT I VRS RQ
Sbjct: 180 TAETGQREEYSMQYPVKESDDLEPTHEELALLQKQLSDGITVRSWRQAERKARRARAAEK 239
Query: 858 XXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXX 1037
TV+ VKSGST +KKR+S+Q++DYSDPLRY IQD
Sbjct: 240 SAATVMPVKSGSTSKKKRASLQEVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLK 299
Query: 1038 XXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKN 1217
R GG+PTFAQWAAAAG+ Q+TLR+RLN+G CKDKMIKSNIRLVISIAKN
Sbjct: 300 LEGLHEELAKRCGGEPTFAQWAAAAGVHQRTLRERLNHGTFCKDKMIKSNIRLVISIAKN 359
Query: 1218 YQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 1397
YQGAGMNLQDLVQEGCRGLV+G+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 360 YQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 419
Query: 1398 FHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGI 1577
FHMVEATYRV+EAR+QLYSENGRHPD+EEVAEA GLSMKRL+AVLLTPKAPRSLDQK+G+
Sbjct: 420 FHMVEATYRVKEARRQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGL 479
Query: 1578 NQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTL 1757
N +LKPSEVIADPDAET+ED+++KQFMK+DL+KVLDSL+PRE QVIRWRFGL+DGRMKTL
Sbjct: 480 NMDLKPSEVIADPDAETAEDLIMKQFMKRDLEKVLDSLSPRENQVIRWRFGLDDGRMKTL 539
Query: 1758 QEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
QEIGE+MGVSRERIRQIES AF QYL+S
Sbjct: 540 QEIGEMMGVSRERIRQIESSAFRKLTNKKRIKQLKQYLVS 579
>XP_011623893.1 PREDICTED: RNA polymerase sigma factor sigB [Amborella trichopoda]
Length = 563
Score = 580 bits (1494), Expect = 0.0
Identities = 320/571 (56%), Positives = 375/571 (65%), Gaps = 4/571 (0%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAP-PLHLKAREPVCFR-QCVSSSTTAVIGVDNLRLPSLE 350
MAC+LPQF +H R +L+ RE CF+ QCVSS+ T V+ VD +R+PSL
Sbjct: 1 MACMLPQF---------IHIRTSYHNNLRTREATCFQTQCVSSTATVVVDVDKVRVPSLG 51
Query: 351 DQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXXXXXXXXXX 530
STS + PLTY+G IG K+ FEA L +E L+
Sbjct: 52 GHSTSVSTHGPLTYVGTIGSQKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKL 111
Query: 531 XXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPADTQPEEEN- 707
G+ P +S+K +DFPSEADI + + S+ A P +++
Sbjct: 112 AKDAALMVGSVPPSRSDKVDDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHK 171
Query: 708 -VAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXXTVISVK 884
V QLS + + +N +AVRS RQT I+VK
Sbjct: 172 SVNQLSPNEMADKQSRENILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVK 231
Query: 885 SGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXXXXXXXX 1064
G+T R+KR+ +Q+IDYSDPLRY IQD
Sbjct: 232 LGTTSRRKRAPLQEIDYSDPLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELT 291
Query: 1065 XRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNLQ 1244
R+GG+PTF QWAAAAGIDQK LR+RL+YG CKDKMIKSNIRLVISIAKNYQG G+++Q
Sbjct: 292 ERFGGEPTFVQWAAAAGIDQKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQ 351
Query: 1245 DLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 1424
DLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV+ATYR
Sbjct: 352 DLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYR 411
Query: 1425 VREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEV 1604
VREA KQLYSENGRHP++EEVAEATGLSMKRLT VLLTPKAPRSLDQKIGINQNLKPSEV
Sbjct: 412 VREATKQLYSENGRHPNDEEVAEATGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEV 471
Query: 1605 IADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGV 1784
I+DP+AET+ED+L+KQFMK+DL+KVL++LNPREKQV+RWRFGLEDGRMKTLQEIGELMGV
Sbjct: 472 ISDPEAETAEDLLMKQFMKQDLEKVLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGV 531
Query: 1785 SRERIRQIESCAFXXXXXXXXXXXXXQYLLS 1877
SRERIRQIES AF QYLLS
Sbjct: 532 SRERIRQIESSAFRKLKNKKRTKNLRQYLLS 562
>XP_018817643.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Juglans
regia]
Length = 585
Score = 580 bits (1496), Expect = 0.0
Identities = 327/585 (55%), Positives = 373/585 (63%), Gaps = 19/585 (3%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFR----------APPLHLKAREPVCFR-QCVSSST------ 305
M+CLLPQF KC DT ++ FR + P + K+R+ + R QC+ S+T
Sbjct: 1 MSCLLPQF-KCHPDTFSIQFRTHQHSVSTTHSHPQNEKSRDRIDIRAQCILSTTSFSTSI 59
Query: 306 --TAVIGVDNLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXX 479
TAV+ + LRLPSLE S +P TY+GA+GPP ++ FEATLA+E LIT
Sbjct: 60 GSTAVLNMGKLRLPSLETDSDPFTTNKPWTYMGAVGPPTEAKFEATLATETLITSEEAVI 119
Query: 480 XXXXXXXXXXXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVV 659
+ K++ EAD+
Sbjct: 120 AAAAAEAVTLAKAAVKFAKDAAMLVNNNHSEKADTRSSVSFEADVLHFNWVQPVKTDRAA 179
Query: 660 TTGHSTPADTQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXX 839
G + E + Q +TK++++ PTD AVRS RQT
Sbjct: 180 IVGDPRGPEAGLLENHSMQHATKESDDLEPTDKELDLVQEQLSKSPAVRSRRQTERKAKR 239
Query: 840 XXXXXXXXXTVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXX 1019
V+SVK GST RKKR S+QDIDYSDPLRY
Sbjct: 240 AKAAEKAAANVVSVKPGSTSRKKRVSLQDIDYSDPLRYLRATTSTSKLLTSTEELELSEG 299
Query: 1020 IQDXXXXXXXXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLV 1199
IQD R G QP FAQWAAAAG+DQKTLRKRLNYG CKDKMIKSNIRLV
Sbjct: 300 IQDLLKLEKLHEELAERCGSQPAFAQWAAAAGVDQKTLRKRLNYGTLCKDKMIKSNIRLV 359
Query: 1200 ISIAKNYQGAGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 1379
ISIAKNYQGAGMNL+DLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 360 ISIAKNYQGAGMNLEDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 419
Query: 1380 RTIRLPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSL 1559
RTIRLPFHMVEATYRV+EARKQLYSENGR PD+ E+AEATGLSMKRLTAVLLTPKAPRSL
Sbjct: 420 RTIRLPFHMVEATYRVKEARKQLYSENGRQPDDVEIAEATGLSMKRLTAVLLTPKAPRSL 479
Query: 1560 DQKIGINQNLKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLED 1739
+QKIGINQNLKPSEVIADPDAET+E++L+KQFMK+DL+ VLDSLNPRE+QVIRWRFG+ED
Sbjct: 480 EQKIGINQNLKPSEVIADPDAETAEELLMKQFMKQDLENVLDSLNPRERQVIRWRFGMED 539
Query: 1740 GRMKTLQEIGELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLL 1874
GRMKTLQEIGE MGVSRERIRQIESCAF QYLL
Sbjct: 540 GRMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 584
>OMP03365.1 RNA polymerase sigma-70 [Corchorus capsularis]
Length = 576
Score = 579 bits (1492), Expect = 0.0
Identities = 327/580 (56%), Positives = 377/580 (65%), Gaps = 10/580 (1%)
Frame = +3
Query: 177 MACLLPQFFKCPSDTATLHFRAPPLH-LKAREPVCFR-QCV--------SSSTTAVIGVD 326
M+CLLPQF KC DT ++ FR H K +E +CFR QCV S++TTAV+ ++
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRTHHSHHSKHKESICFRTQCVLSTSSPSTSTATTAVLDLE 59
Query: 327 NLRLPSLEDQSTSSAAVRPLTYLGAIGPPAKSTFEATLASELLITGXXXXXXXXXXXXXX 506
LRLPS E Q S A RP Y GA GPP++++F A+L +E L+
Sbjct: 60 KLRLPSFEAQPNSVVADRPW-YRGATGPPSEASFGASLTTENLLKSDDAVIASAAAEAVA 118
Query: 507 XXXXXXXXXXXXXXXXGTSPLLKSEKPEDFPSEADIXXXXXXXXXXXXXVVTTGHSTPAD 686
+ K E S D G S +
Sbjct: 119 LARAAVKVAKDAALMAKSFNSSKIEMKSTVSSATDTLTSKWALFTEAERAGIVGDSPTNE 178
Query: 687 TQPEEENVAQLSTKDTENSNPTDNXXXXXXXXXXXXIAVRSGRQTXXXXXXXXXXXXXXX 866
+ +E++ + ST +++ PT+ IAVRS RQT
Sbjct: 179 S--DEDDSEEKSTTESDKLEPTNEELEYLEEQLSRSIAVRSRRQTERKAKRTRAAEKASS 236
Query: 867 TVISVKSGSTPRKKRSSIQDIDYSDPLRYXXXXXXXXXXXXXXXXXXXXXXIQDXXXXXX 1046
+S++SGS RKKR ++Q++DYSDPLRY IQD
Sbjct: 237 NAVSLRSGSNSRKKRGALQEVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLER 296
Query: 1047 XXXXXXXRYGGQPTFAQWAAAAGIDQKTLRKRLNYGIRCKDKMIKSNIRLVISIAKNYQG 1226
R GGQPTF+QWAAAAG+DQKTLR+RLNYGI CKDKMIKSNIRLVISIAKNYQG
Sbjct: 297 LEEELRERCGGQPTFSQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQG 356
Query: 1227 AGMNLQDLVQEGCRGLVRGSEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 1406
AGMNLQDLVQEGCRGLVRG+EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM
Sbjct: 357 AGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 416
Query: 1407 VEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQN 1586
VEATYRV+EA+KQLYSENGRHPDNEEVAEATGLSMKRL AVLLTPKAPRSLDQKIGINQN
Sbjct: 417 VEATYRVKEAKKQLYSENGRHPDNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKIGINQN 476
Query: 1587 LKPSEVIADPDAETSEDVLIKQFMKKDLDKVLDSLNPREKQVIRWRFGLEDGRMKTLQEI 1766
LKPSEVIADP+A+T+ED+L+KQFMKKDL+KVLDSL RE+QVIRWRFG+EDGRMKTLQEI
Sbjct: 477 LKPSEVIADPEADTAEDILLKQFMKKDLEKVLDSLGQRERQVIRWRFGMEDGRMKTLQEI 536
Query: 1767 GELMGVSRERIRQIESCAFXXXXXXXXXXXXXQYLLS*AS 1886
GELMGVSRERIRQIESCAF QYL+S AS
Sbjct: 537 GELMGVSRERIRQIESCAFRKMKNKKRTKNLQQYLVSYAS 576