BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00001703
         (2056 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   578   0.0  
XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   567   0.0  
OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]             559   0.0  
OMP05985.1 RNA polymerase sigma-70 [Corchorus olitorius]              556   0.0  
XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   556   0.0  
XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isofo...   555   0.0  
XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   555   0.0  
XP_006878659.1 PREDICTED: RNA polymerase sigma factor sigA [Ambo...   554   0.0  
XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Po...   554   0.0  
XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citr...   553   0.0  
XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatr...   553   0.0  
XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus cl...   553   0.0  
EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]                 553   0.0  
XP_018828144.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   553   0.0  
XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   552   0.0  
XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Popu...   552   0.0  
AKC88633.1 sigma factor [Melianthus villosus]                         552   0.0  
XP_007219023.1 hypothetical protein PRUPE_ppa004393mg [Prunus pe...   551   0.0  
EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus c...   551   0.0  
XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Rici...   551   0.0  

>XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  578 bits (1489), Expect = 0.0
 Identities = 311/472 (65%), Positives = 359/472 (76%), Gaps = 5/472 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGFSCNRQSQSIKALEEHLDTSSAPSNADIWHQRSDI 554
            G  Q+ A S KN I+A+KS N G  F  N+  QSI+AL+EH++T S PS AD+W Q S +
Sbjct: 36   GLAQYQATSAKNVIIARKSSNFGDSFPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGL 95

Query: 555  XXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAP-VGGYKKIEVTRSGTSARQ 731
                               QK +LEKQW+LSFEQ     AP    +KKI+VTRSG SARQ
Sbjct: 96   LEEENTDLDYSVDALLLL-QKFLLEKQWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQ 154

Query: 732  RRTKPNTRKSLNRNASMTCLSKRKRL----SPELQSHSTGYVKGTVSEDLLSHAEVIRLS 899
            RRT    R  L+   S+   +KRK+L    SPEL     GYVKG +SE+LL+HAEV++LS
Sbjct: 155  RRTSTR-RTCLSPKHSIMQPTKRKQLGSMVSPELLKSHYGYVKGVISEELLTHAEVVQLS 213

Query: 900  KKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSNVR 1079
            KKIKAG              GCDPSD+QLASSLRIS +EL+ ++IECSLARE L MSNVR
Sbjct: 214  KKIKAGLSLEEHKLRLKERLGCDPSDEQLASSLRISRAELQSKVIECSLAREKLTMSNVR 273

Query: 1080 LVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE 1259
            LVMS+AQKYDNMG E+ADL+QGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
Sbjct: 274  LVMSIAQKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE 333

Query: 1260 NSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKVYS 1439
            NSRTLRLPT+LHERL LIRNAK RL E GITPSI+RIAE LNMS KKVRNATEA+NKV+S
Sbjct: 334  NSRTLRLPTHLHERLCLIRNAKIRLAEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFS 393

Query: 1440 LDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREIIR 1619
            LDREAFP+LNG P ETL S+IAD+ LENNPWH +D WSLK+EVN +++TTL ERER+IIR
Sbjct: 394  LDREAFPSLNGLPRETLHSYIADNRLENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIR 453

Query: 1620 LYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            LYYGLDKEC TWEDI + IGLSRERVRQVGL ALEKLK+ A K+RL+ MLVK
Sbjct: 454  LYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKKRLDTMLVK 505


>XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            XP_010275190.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Nelumbo nucifera] XP_010275191.1 PREDICTED:
            RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  567 bits (1461), Expect = 0.0
 Identities = 306/474 (64%), Positives = 364/474 (76%), Gaps = 7/474 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGFSCNRQSQSIKALEEHLDTSSAPSNADIWHQRSDI 554
            G  Q+  A +K+ ++AKKS N    F+ NR +QSIKAL+EHL+T S  S  D+W Q SD 
Sbjct: 46   GLAQYQTAPSKSVVIAKKSSNFDHDFASNRHNQSIKALKEHLNTFST-STEDMWLQTSD- 103

Query: 555  XXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGGY-KKIEVTRSGTSARQ 731
                               QKS+LEKQW+LSFE++    AP     KKI+VTRSG SARQ
Sbjct: 104  HLEEGNSDLDYSLEALLLLQKSLLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQ 163

Query: 732  RRTKPNTRKS-LNRNASMTCLSKRKRLSPE-----LQSHSTGYVKGTVSEDLLSHAEVIR 893
            RRT  NTRK  LN ++SM   ++R+ L        LQS   GYVKG +SE+LL+H+EV++
Sbjct: 164  RRT--NTRKKYLNTDSSMMQTTRRRHLGSMVSEELLQSRLKGYVKGVISEELLTHSEVVQ 221

Query: 894  LSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSN 1073
            LSKKIK G              GC+PSD+QLA+SLRIS +EL+++MIECSLARE +AMSN
Sbjct: 222  LSKKIKVGISLEEHKMRLKERLGCEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSN 281

Query: 1074 VRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 1253
            VRLVMS+A KYDNMG E+ADL+QGGLI LLRGIEKFDSSKG KISTYVYWWIRQGVSRAL
Sbjct: 282  VRLVMSIAHKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRAL 341

Query: 1254 VENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKV 1433
            VENSRTLRLP+++HERL LIRNAK RLEE GITPSI+RIAE LN+S+KKVRNATEA+NKV
Sbjct: 342  VENSRTLRLPSHMHERLSLIRNAKIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKV 401

Query: 1434 YSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREI 1613
             SLDREAFP+LNG PGETL S+IAD+ +ENNPWH +D WSLK+EVN ++NTTL ERER+I
Sbjct: 402  ISLDREAFPSLNGLPGETLHSYIADNRIENNPWHGVDEWSLKDEVNNLLNTTLRERERDI 461

Query: 1614 IRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IRLYYGLD+EC TWEDI + IGLSRERVRQVGL ALEKLK+ A K+RL+AMLVK
Sbjct: 462  IRLYYGLDEECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKKRLDAMLVK 515


>OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 508

 Score =  559 bits (1440), Expect = 0.0
 Identities = 307/486 (63%), Positives = 366/486 (75%), Gaps = 6/486 (1%)
 Frame = +3

Query: 336  SDGYGCRIHRARLGATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSS 512
            ++ YGC  H         P +STK+ IVAKKS N      S NR++QSIKAL+EH+D+++
Sbjct: 33   ANDYGCSHH---------PTSSTKSLIVAKKSSNCSQNLPSSNRRTQSIKALKEHVDSAT 83

Query: 513  APSNADIWHQRSDIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-Y 689
              S A+ W Q S+                    QKSMLEKQW+LSFE+    ++P    +
Sbjct: 84   VISTAEPWFQGSN-DLDEENYDLDYSVDALLLLQKSMLEKQWTLSFERTVFTESPGRKTH 142

Query: 690  KKIEVTRSGTSARQRRTKPNTRKSLNRNASM---TCLSKRKRLSPEL-QSHSTGYVKGTV 857
            KKI VT SG SARQRR     RK L +N S+   +    R  +SPEL QS   GYVKG V
Sbjct: 143  KKIPVTCSGVSARQRRLNTK-RKLLRQNKSVIQPSAKQLRSLISPELFQSRLNGYVKGVV 201

Query: 858  SEDLLSHAEVIRLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIE 1037
            SE+LLSHAEV+RLSKKIK G              GC+PSD+QLA+SL+I+ +ELR ++IE
Sbjct: 202  SEELLSHAEVVRLSKKIKVGLSLEDHRSRLTERLGCEPSDEQLATSLKITRAELRSKVIE 261

Query: 1038 CSLARETLAMSNVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYV 1217
            CSLARE LAMSNVRLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTYV
Sbjct: 262  CSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYV 321

Query: 1218 YWWIRQGVSRALVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRK 1397
            YWWIRQGVSRALVENSRTLRLPT+LHERL LIRNAK RLEE GITP+I+RIAESLNMS+K
Sbjct: 322  YWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKNRLEEKGITPTIDRIAESLNMSQK 381

Query: 1398 KVRNATEAMNKVYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKI 1577
            KVRNATEA++KV+SLDR+AFP+LNG PGET  S+I D+++ENNPWH +D W+LK+EVN++
Sbjct: 382  KVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIPDNHVENNPWHGVDEWALKDEVNRL 441

Query: 1578 INTTLGEREREIIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRL 1757
            I  TLGEREREIIRLYYGLDK   TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++
Sbjct: 442  ITITLGEREREIIRLYYGLDKGSLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501

Query: 1758 EAMLVK 1775
            EAMLVK
Sbjct: 502  EAMLVK 507


>OMP05985.1 RNA polymerase sigma-70 [Corchorus olitorius]
          Length = 507

 Score =  556 bits (1433), Expect = 0.0
 Identities = 307/487 (63%), Positives = 364/487 (74%), Gaps = 7/487 (1%)
 Frame = +3

Query: 336  SDGYGCRIHRARLGATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSS 512
            ++ YGC  H         P +STK+ IVAKKS N      S NR++QSIKAL+EH+D+++
Sbjct: 32   ANDYGCSHH---------PTSSTKSLIVAKKSSNCSQSLPSSNRRTQSIKALKEHVDSAT 82

Query: 513  APSNADIWHQRSDIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-Y 689
              S A+ W Q S+                    QKSMLEKQW+LSFE+    ++P     
Sbjct: 83   VISTAEPWFQGSN-DLDEESYDLDYSVEALLLLQKSMLEKQWTLSFERTVFTESPSRKTL 141

Query: 690  KKIEVTRSGTSARQRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGT 854
            KKI VT SG SARQRR   NT++ L R          K+L    SPEL QS   GYVKG 
Sbjct: 142  KKIPVTCSGVSARQRRL--NTKRKLLRQKKSVIQPSAKQLRSLISPELLQSRLKGYVKGV 199

Query: 855  VSEDLLSHAEVIRLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMI 1034
            VSE+LLSHAEV+RLSKKIK G              GC+PSD+QLA+SL+I+ +ELR ++I
Sbjct: 200  VSEELLSHAEVVRLSKKIKVGLSLEDHRSRLTERLGCEPSDEQLATSLKITRAELRSKVI 259

Query: 1035 ECSLARETLAMSNVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTY 1214
            ECSLARE LAMSNVRLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTY
Sbjct: 260  ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTY 319

Query: 1215 VYWWIRQGVSRALVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSR 1394
            VYWWIRQGVSRALVENSRTLRLPT+LHERL LIRNAK RLEE GITP+I+RIAESLNMS+
Sbjct: 320  VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKNRLEEKGITPTIDRIAESLNMSQ 379

Query: 1395 KKVRNATEAMNKVYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNK 1574
            KKVRNATEA++KV+SLDR+AFP+LNG PGET  S+I D+++ENNPWH +D W+LK+EVN+
Sbjct: 380  KKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIPDNHVENNPWHGVDDWALKDEVNR 439

Query: 1575 IINTTLGEREREIIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRR 1754
            +I  TLG REREIIRLYYGLDKE  TWEDI K IGLSRERVRQVGL ALEKLK+ A K++
Sbjct: 440  LITITLGIREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKK 499

Query: 1755 LEAMLVK 1775
            +EAMLVK
Sbjct: 500  MEAMLVK 506


>XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium raimondii] KJB44350.1 hypothetical protein
            B456_007G247500 [Gossypium raimondii]
          Length = 508

 Score =  556 bits (1432), Expect = 0.0
 Identities = 302/474 (63%), Positives = 361/474 (76%), Gaps = 7/474 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIW-HQRS 548
            G++ +   STK  +VAK+S N      S NR +QSIKA +EH+DT+S+ S  + W H  +
Sbjct: 37   GSSYYQTPSTKTLMVAKRSSNCSQNLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTN 96

Query: 549  DIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSA 725
            D+                   QKSMLEKQW+LSFE+    ++P    + K+ VT SG SA
Sbjct: 97   DLEQESYDLDYSVEALLLL--QKSMLEKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSA 154

Query: 726  RQRRTKPNTRKSLNRNASM---TCLSKRKRLSPEL-QSHSTGYVKGTVSEDLLSHAEVIR 893
            RQRR     RK L++N SM        R  + PEL Q+   GYVKG VSEDLLSHAEV+R
Sbjct: 155  RQRRFSTK-RKILSQNKSMIQPNAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVR 213

Query: 894  LSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSN 1073
            LS+KIKAG              GC+PSD+QLA+SL++S +ELR + IECSLARE LAMSN
Sbjct: 214  LSRKIKAGLSLEEHRLRLKERLGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSN 273

Query: 1074 VRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 1253
            VRLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTYVYWWIRQGVSRAL
Sbjct: 274  VRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRAL 333

Query: 1254 VENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKV 1433
            VENSRTLRLPTYLHERL LIRNAK RLEE GITP+I+RIAESLNMS+KKVRNATEA++KV
Sbjct: 334  VENSRTLRLPTYLHERLGLIRNAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKV 393

Query: 1434 YSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREI 1613
            +SLDR+AFP+LNG PGET  S+IAD+++ENNPWH +D W+LK+EVN++IN TLGEREREI
Sbjct: 394  FSLDRDAFPSLNGLPGETHHSYIADNHVENNPWHGVDEWALKDEVNRLINITLGEREREI 453

Query: 1614 IRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IRLY+GLDKE  TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 454  IRLYHGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
            cacao]
          Length = 508

 Score =  555 bits (1431), Expect = 0.0
 Identities = 306/473 (64%), Positives = 363/473 (76%), Gaps = 6/473 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRSD 551
            G++    +STK+ IVAKKS N      S NR++QSIKAL+EH+D++S  S A+   Q S+
Sbjct: 37   GSSHHQTSSTKSLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSN 96

Query: 552  IXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSAR 728
                                QKSMLEKQW+LSFE+    ++P    +KKI VT SG SAR
Sbjct: 97   -HLEVESYDLDYSVEALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSAR 155

Query: 729  QRRTKPNTRKSLNRNASM---TCLSKRKRLSPEL-QSHSTGYVKGTVSEDLLSHAEVIRL 896
            QRR     RK L++N S+        R  +SPEL QS   GYVKG VSE+LLSHAEV+RL
Sbjct: 156  QRRFNTK-RKILSQNKSIIQPNAKQLRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRL 214

Query: 897  SKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSNV 1076
            SKKIKAG              GC+PSD+QLA+SL+IS +ELR ++IECSLARE LAMSNV
Sbjct: 215  SKKIKAGLSLEEHRLRLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNV 274

Query: 1077 RLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV 1256
            RLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTYVYWWIRQGVSRALV
Sbjct: 275  RLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALV 334

Query: 1257 ENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKVY 1436
            ENSRTLRLPT+LHERL LIRNAK RLEE GITP+I+RIAESLNMS+KKVRNATEA++KV+
Sbjct: 335  ENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVF 394

Query: 1437 SLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREII 1616
            SLDR+AFP+LNG PGET  S+IAD+++EN PWH +D W+LK+EVN++I  TLGEREREII
Sbjct: 395  SLDRDAFPSLNGLPGETHHSYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREII 454

Query: 1617 RLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            RLYYGLDKE  TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 455  RLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like [Gossypium hirsutum]
            XP_016671617.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Gossypium hirsutum]
          Length = 508

 Score =  555 bits (1429), Expect = 0.0
 Identities = 302/474 (63%), Positives = 361/474 (76%), Gaps = 7/474 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIW-HQRS 548
            G++ +   STK  IVAK+S N      S NR +QSIKA + H+DT+S+ S  + W H  +
Sbjct: 37   GSSYYQTPSTKTLIVAKRSSNCSQNLPSSNRHTQSIKAFKGHVDTASSISTVEPWIHGAN 96

Query: 549  DIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSA 725
            D+                   QKSMLEKQW+LSFE+   +++P    + K+ VT SG SA
Sbjct: 97   DLEQESYDLDCSVEALLLL--QKSMLEKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSA 154

Query: 726  RQRRTKPNTRKSLNRNASM---TCLSKRKRLSPEL-QSHSTGYVKGTVSEDLLSHAEVIR 893
            RQRR     RK L++N SM        R  + PEL Q+   GYVKG VSEDLLSHAEV+R
Sbjct: 155  RQRRFNTK-RKILSQNKSMIQPNAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVR 213

Query: 894  LSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSN 1073
            LSKKIKAG              GC+PSD+QLA+SL++S +ELR + IECSLARE LAMSN
Sbjct: 214  LSKKIKAGLSLEEHILRLKERLGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSN 273

Query: 1074 VRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 1253
            VRLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTYVYWWIRQGVSRAL
Sbjct: 274  VRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRAL 333

Query: 1254 VENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKV 1433
            VENSRTLRLPTYLHERL LIRNAK RLEE GITP+I+RIAESLNMS+KKVRNATEA++KV
Sbjct: 334  VENSRTLRLPTYLHERLGLIRNAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKV 393

Query: 1434 YSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREI 1613
            +SLDR+AFP+LNG PGET  S+IAD+++ENNPWH +D W+LK+EVN++I+ TLGEREREI
Sbjct: 394  FSLDRDAFPSLNGLPGETHHSYIADNHVENNPWHGVDEWALKDEVNRLIDITLGEREREI 453

Query: 1614 IRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IRLY+GLDKE  TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 454  IRLYHGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_006878659.1 PREDICTED: RNA polymerase sigma factor sigA [Amborella trichopoda]
            ERM94804.1 hypothetical protein AMTR_s00011p00266100
            [Amborella trichopoda]
          Length = 497

 Score =  554 bits (1427), Expect = 0.0
 Identities = 301/473 (63%), Positives = 352/473 (74%), Gaps = 6/473 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGFSCNRQSQSIKALEEHLDTSSAPSNADIWHQRSDI 554
            GATQFPA S K+ IV+KKS   G     NRQ+Q I A++EH++  S+ S++       D 
Sbjct: 35   GATQFPAVSHKSFIVSKKSPGFGPNSPSNRQTQYINAIKEHVNAPSSSSSSSTTEANPDF 94

Query: 555  XXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGL-VDAPVGGYKKIEVTRSGTSARQ 731
                               QKSMLEKQW+LSF+QAG   D      KK+ V  SG SARQ
Sbjct: 95   ESSLEALILL---------QKSMLEKQWNLSFDQAGTSTDLCEESCKKLGVISSGASARQ 145

Query: 732  RRTKPNTRKSLNRNASMTCLSKRKR----LSPEL-QSHSTGYVKGTVSEDLLSHAEVIRL 896
            RR   + R+ LN+ A    + ++K+    +SPEL Q H  GYVKG  ++ LLSHAEV+ L
Sbjct: 146  RRN--SLRRPLNQRAGTVLVRRKKQATPIVSPELLQGHFRGYVKGISNDSLLSHAEVVHL 203

Query: 897  SKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSNV 1076
            S KI+AG              G DPSD+ LASSL+IS SEL  ++IECSLA+E LAMSN+
Sbjct: 204  SWKIRAGLSLEEHKSRLKEKLGFDPSDELLASSLKISRSELHSKLIECSLAKEKLAMSNI 263

Query: 1077 RLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV 1256
            RLVMS+AQKYDNMG E+ADLIQGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSRA+V
Sbjct: 264  RLVMSIAQKYDNMGIEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAMV 323

Query: 1257 ENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKVY 1436
            ENSRTLRLPT+LHERL LIRNAK RL+E G+TPSI RIA+SLNMS+KKV+NATEAM KV+
Sbjct: 324  ENSRTLRLPTHLHERLSLIRNAKIRLKEQGLTPSIHRIAKSLNMSKKKVKNATEAMTKVF 383

Query: 1437 SLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREII 1616
            SLDREAFPTLNG PGETL S+IAD+NL NNPWH +D W LK EVNK+I++TL ERE++II
Sbjct: 384  SLDREAFPTLNGLPGETLHSYIADNNLMNNPWHGVDEWLLKAEVNKLISSTLAEREQDII 443

Query: 1617 RLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            RLYYGLDKECHTWEDI + IGLSRERVRQVGL ALEKLKN A  +RLEAMLVK
Sbjct: 444  RLYYGLDKECHTWEDISRKIGLSRERVRQVGLVALEKLKNAARNKRLEAMLVK 496


>XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            EEF00264.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein
            [Populus trichocarpa]
          Length = 509

 Score =  554 bits (1427), Expect = 0.0
 Identities = 303/474 (63%), Positives = 358/474 (75%), Gaps = 7/474 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRSD 551
            G T +P A+TKN IVAKKS N G  F S NR S SIKAL+EH+DT+SA SN   W +  D
Sbjct: 37   GITYYPTATTKNVIVAKKSSNYGPSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFD 96

Query: 552  IXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVG-GYKKIEVTRSGTSAR 728
                                QKSMLEKQW+LSFE+    D+      KKI VT SG SAR
Sbjct: 97   -DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSAR 155

Query: 729  QRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDLLSHAEVIR 893
            QRR   N RK+ N++  M+  S  K L    SP+L Q+   GYVKG VS+++L H EV+R
Sbjct: 156  QRRVN-NRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVR 214

Query: 894  LSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSN 1073
            LS+ I+AG              GC+PSD+Q+A SLRIS ++L+ ++I+CSLARE LAMSN
Sbjct: 215  LSRIIRAGLSFEDHKSRLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSN 274

Query: 1074 VRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 1253
            VRLVMS+AQKYDNMG E+ADL+QGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL
Sbjct: 275  VRLVMSIAQKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 334

Query: 1254 VENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKV 1433
            V+NSRTLRLP +LHERL LIRNAK RLEE G+TPSI+RIAESLNMS++KVRNATEA++KV
Sbjct: 335  VDNSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKV 394

Query: 1434 YSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREI 1613
            +SLDREAFP+LNG PGET  S+IAD+  ENNPWH +D W+LKEEVNK+I++TL ERE+EI
Sbjct: 395  FSLDREAFPSLNGLPGETHHSYIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEI 454

Query: 1614 IRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IRLY+GLD+EC TWEDI K +GLSRERVRQVGL ALEKLK+ A KR  EAMLVK
Sbjct: 455  IRLYHGLDQECLTWEDISKRMGLSRERVRQVGLVALEKLKHAARKRNTEAMLVK 508


>XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
            XP_006484699.1 PREDICTED: RNA polymerase sigma factor
            sigA [Citrus sinensis] XP_006484700.1 PREDICTED: RNA
            polymerase sigma factor sigA [Citrus sinensis]
          Length = 508

 Score =  553 bits (1426), Expect = 0.0
 Identities = 304/475 (64%), Positives = 359/475 (75%), Gaps = 7/475 (1%)
 Frame = +3

Query: 372  LGATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRS 548
            LG+      STKN + AKKS N    F S NRQ+Q IKAL+EH+DT+ A S A+ W +  
Sbjct: 36   LGSANSQVGSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPP 94

Query: 549  DIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSA 725
            +                    QKSMLEKQW+LSFE+  L D+P    +KK+ VT SG SA
Sbjct: 95   N-SIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSA 153

Query: 726  RQRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDLLSHAEVI 890
            RQRR   + +K L++N S+   +  K+L    SPEL Q+H  GYVKG VSE+LL+HAEV+
Sbjct: 154  RQRRLN-SKKKILSQNKSVPQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVV 212

Query: 891  RLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMS 1070
            RLSKKIK G              GC+PS +QLA+SLRIS  EL+  ++ECSLARE L MS
Sbjct: 213  RLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMS 272

Query: 1071 NVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRA 1250
            NVRLVMS+AQ+YDNMG ++ADL+QGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSRA
Sbjct: 273  NVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRA 332

Query: 1251 LVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNK 1430
            LVENSRTLRLP +LHERL LIRNAK RLEE G+TPS++RIAE LNMS+KKVRNATEA+ K
Sbjct: 333  LVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGK 392

Query: 1431 VYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGERERE 1610
            V+SLDREAFP+LNG PGET  S+IAD+ +ENNPWH +D W+LK+EVNK+I  TLGERERE
Sbjct: 393  VFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGERERE 452

Query: 1611 IIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IIRLYYGLDKEC TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 453  IIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            XP_012070279.1 PREDICTED: RNA polymerase sigma factor
            sigA [Jatropha curcas] KDP39565.1 hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  553 bits (1425), Expect = 0.0
 Identities = 309/482 (64%), Positives = 362/482 (75%), Gaps = 15/482 (3%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNA-------- 527
            G T + ++STKN IVAKKS N G  F S NR +QSIKAL+EH+DT+S+PS A        
Sbjct: 36   GLTHYQSSSTKNVIVAKKSSNYGSSFQSSNRNAQSIKALKEHVDTASSPSTAATGFETFV 95

Query: 528  DIWHQRSDIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAP-VGGYKKIEV 704
            DI    SD+                   QKSMLEKQW+LSFE+    D+P     K+I +
Sbjct: 96   DIEEASSDLDYSVEALLLL---------QKSMLEKQWNLSFERTASSDSPSTKSQKQIPI 146

Query: 705  TRSGTSARQRRTKPNTRKSLNRNASMTCLSKRKRL----SPELQ-SHSTGYVKGTVSEDL 869
            T SG SARQRR     RK+L ++ S+   S  K+L    SPEL  +   GYVKG VSE+L
Sbjct: 147  TCSGLSARQRRINTR-RKNLIQSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEEL 205

Query: 870  LSHAEVIRLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLA 1049
            L+HAEV+ LS+ IKAG              GCDPSD+QLA+SLRIS ++LR ++I CSLA
Sbjct: 206  LTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLA 265

Query: 1050 RETLAMSNVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWI 1229
            RE LAMSNVRLVMS+AQ+YDNMG E+ADL+QGGLI LLRGIEKFDSSKGFKISTYVYWWI
Sbjct: 266  REKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWI 325

Query: 1230 RQGVSRALVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRN 1409
            RQGVSRALVENSRTLRLP +LHERL LIRNAK RLEE G+TPSI+RIAESLNMS+KKVRN
Sbjct: 326  RQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNMSQKKVRN 385

Query: 1410 ATEAMNKVYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTT 1589
            ATEA++KV+SLDREAFP+LNG PGET  S+IAD+  ENNPWH +D W+LK+EVNK+I+ T
Sbjct: 386  ATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCPENNPWHGVDEWALKDEVNKLIDLT 445

Query: 1590 LGEREREIIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAML 1769
            L +REREIIRLYYGLD E  TWEDI K IGLSRERVRQVGL ALEKLK+ A K++LEAML
Sbjct: 446  LQQREREIIRLYYGLDNETLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKLEAML 505

Query: 1770 VK 1775
            VK
Sbjct: 506  VK 507


>XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus clementina] ESR50643.1
            hypothetical protein CICLE_v10031289mg [Citrus
            clementina]
          Length = 508

 Score =  553 bits (1424), Expect = 0.0
 Identities = 304/475 (64%), Positives = 359/475 (75%), Gaps = 7/475 (1%)
 Frame = +3

Query: 372  LGATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRS 548
            LG+      STKN + AKKS N    F S NRQ+Q IKAL+EH+DT+ A S A+ W +  
Sbjct: 36   LGSANSQVGSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPP 94

Query: 549  DIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSA 725
            +                    QKSMLEKQW+LSFE+  L D+P    +KK+ VT SG SA
Sbjct: 95   N-SIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSA 153

Query: 726  RQRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDLLSHAEVI 890
            RQRR   + +K L++N S+   +  K+L    SPEL Q+H  GYVKG VSE+LL+HAEV+
Sbjct: 154  RQRRLN-SKKKILSQNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVV 212

Query: 891  RLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMS 1070
            RLSKKIK G              GC+PS +QLA+SLRIS  EL+  ++ECSLARE L MS
Sbjct: 213  RLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMS 272

Query: 1071 NVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRA 1250
            NVRLVMS+AQ+YDNMG ++ADLIQGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSRA
Sbjct: 273  NVRLVMSIAQRYDNMGADMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRA 332

Query: 1251 LVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNK 1430
            LVENSRTLRLP +LHERL LIRNAK RLEE G+TP+++RIAE LNMS+KKVRNATEA+ K
Sbjct: 333  LVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGK 392

Query: 1431 VYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGERERE 1610
            V+SLDREAFP+LNG PGET  S+IAD+ +ENNPWH +D W+LK+EVNK+I  TLGERERE
Sbjct: 393  VFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGERERE 452

Query: 1611 IIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IIRLYYGLDKEC TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 453  IIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  553 bits (1424), Expect = 0.0
 Identities = 305/473 (64%), Positives = 362/473 (76%), Gaps = 6/473 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRSD 551
            G++    +STK+ IVAKKS N      S NR++QSIKAL+EH+D++S  S A+   Q S+
Sbjct: 37   GSSHHQTSSTKSLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSN 96

Query: 552  IXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSAR 728
                                QKSMLEKQW+LSFE+    ++P    +KKI VT SG SAR
Sbjct: 97   -DLEVESYDLDYSVEALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSAR 155

Query: 729  QRRTKPNTRKSLNRNASM---TCLSKRKRLSPEL-QSHSTGYVKGTVSEDLLSHAEVIRL 896
            QRR     RK L +N S+        R  +SPEL QS   GYVKG VS++LLSHAEV+RL
Sbjct: 156  QRRFNTK-RKILIQNKSIIQPNAKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRL 214

Query: 897  SKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSNV 1076
            SKKIKAG              GC+PSD+QLA+SL+IS +ELR ++IECSLARE LAMSNV
Sbjct: 215  SKKIKAGLSLEEHRLRLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNV 274

Query: 1077 RLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV 1256
            RLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTYVYWWIRQGVSRALV
Sbjct: 275  RLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALV 334

Query: 1257 ENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKVY 1436
            ENSRTLRLPT+LHERL LIRNAK RLEE GITP+I+RIAESLNMS+KKVRNATEA++KV+
Sbjct: 335  ENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVF 394

Query: 1437 SLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREII 1616
            SLDR+AFP+LNG PGET  S+IAD+++EN PWH +D W+LK+EVN++I  TLGEREREII
Sbjct: 395  SLDRDAFPSLNGLPGETHHSYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREII 454

Query: 1617 RLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            RLYYGLDKE  TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 455  RLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_018828144.1 PREDICTED: RNA polymerase sigma factor sigA-like [Juglans regia]
            XP_018828145.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Juglans regia]
          Length = 509

 Score =  553 bits (1424), Expect = 0.0
 Identities = 305/470 (64%), Positives = 354/470 (75%), Gaps = 8/470 (1%)
 Frame = +3

Query: 387  FPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRSDIXXX 563
            +   S+K  I AKKS N   GF S  +Q+QSIKA++EH+D  S+PS A+ W QRS+    
Sbjct: 41   YQITSSKKVISAKKSANFTPGFQSAIQQTQSIKAVKEHVDIVSSPSTAEPWFQRSN-ELE 99

Query: 564  XXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVG-GYKKIEVTRSGTSARQRRT 740
                            QKSMLEKQW+LSFE   L D+P G  ++KI VT SG SARQRR 
Sbjct: 100  EESSDLHYSMEALLLLQKSMLEKQWNLSFEPKVLTDSPTGKNHRKIPVTCSGVSARQRRV 159

Query: 741  KPNTR-KSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDLLSHAEVIRLSK 902
              NTR K LN+N  +   S  K+L    SPEL QSHS GYVKG VSE+LL+HA+V+ LSK
Sbjct: 160  --NTRNKILNKNGYLMQPSSGKQLGSMISPELLQSHSKGYVKGVVSEELLTHADVVCLSK 217

Query: 903  KIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSNVRL 1082
            KI AG              GC+PSD QLA+SLRI  ++LR + IECSLARE LAMSNVRL
Sbjct: 218  KISAGLSLEEHKLRLKERLGCEPSDDQLATSLRIPLAQLRSKFIECSLAREKLAMSNVRL 277

Query: 1083 VMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVEN 1262
            VMS+AQ+Y+NMG E++DL+QGGLI LLRGIEKFDSSKG +ISTYVYWWIRQGVSR LVEN
Sbjct: 278  VMSIAQRYENMGAEMSDLVQGGLIGLLRGIEKFDSSKGCRISTYVYWWIRQGVSRTLVEN 337

Query: 1263 SRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKVYSL 1442
            SRTLRLPT+LHERL LIRNAK RL+E GI PSI+RIAE LNMS+KKVRNAT+AM+KV SL
Sbjct: 338  SRTLRLPTHLHERLGLIRNAKVRLQEKGINPSIDRIAECLNMSKKKVRNATQAMSKVISL 397

Query: 1443 DREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREIIRL 1622
            DREAFP+LNG PGET  S+IAD+  ENNPWH +D W+LK+EVNK+IN TLGEREREIIRL
Sbjct: 398  DREAFPSLNGLPGETHHSYIADNRPENNPWHGVDEWALKDEVNKLINMTLGEREREIIRL 457

Query: 1623 YYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLV 1772
            Y+GLD EC TWEDI K IGLSRERVRQVGL A EKLK+ A K +LEAMLV
Sbjct: 458  YHGLDNECLTWEDISKRIGLSRERVRQVGLVAFEKLKHAARKSKLEAMLV 507


>XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
            [Gossypium arboreum] XP_017630519.1 PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X1 [Gossypium
            arboreum] KHG03684.1 RNA polymerase sigma factor rpoD
            [Gossypium arboreum] KHG18047.1 RNA polymerase sigma
            factor rpoD [Gossypium arboreum]
          Length = 508

 Score =  552 bits (1423), Expect = 0.0
 Identities = 301/474 (63%), Positives = 360/474 (75%), Gaps = 7/474 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIW-HQRS 548
            G++ +   STK  IVAK+S N      S NR +Q IKA + H+DT+S+ S  + W H  +
Sbjct: 37   GSSYYQTPSTKTLIVAKRSSNCSQNLPSSNRHTQLIKAFKGHVDTASSISTVEPWIHGAN 96

Query: 549  DIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGG-YKKIEVTRSGTSA 725
            D+                   QKSMLEKQW+LSFE+   +++P    + K+ VT SG SA
Sbjct: 97   DLEQESYDLDCSVEALLLL--QKSMLEKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSA 154

Query: 726  RQRRTKPNTRKSLNRNASM---TCLSKRKRLSPEL-QSHSTGYVKGTVSEDLLSHAEVIR 893
            RQRR     RK L++N SM        R  + PEL Q+   GYVKG VSEDLLSHAEV+R
Sbjct: 155  RQRRFNTK-RKILSQNKSMIQPNAKQLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVR 213

Query: 894  LSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSN 1073
            LSKKIKAG              GC+PSD+QLA+SL++S +ELR + IECSLARE LAMSN
Sbjct: 214  LSKKIKAGLSLEEHILRLKERLGCEPSDEQLATSLKVSRAELRSRSIECSLAREKLAMSN 273

Query: 1074 VRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 1253
            VRLVMS+AQ+YDNMG E++DLIQGGLI LLRGIEKFDSSKG+KISTYVYWWIRQGVSRAL
Sbjct: 274  VRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRAL 333

Query: 1254 VENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKV 1433
            VENSRTLRLPTYLHERL LIRNAK RLEE GITP+I+RIAESLNMS+KKVRNATEA++KV
Sbjct: 334  VENSRTLRLPTYLHERLGLIRNAKYRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKV 393

Query: 1434 YSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREI 1613
            +SLDR+AFP+LNG PGET  S+IAD+++ENNPWH +D W+LK+EVN++I+ TLGEREREI
Sbjct: 394  FSLDRDAFPSLNGLPGETHHSYIADNHVENNPWHGVDEWALKDEVNRLIDITLGEREREI 453

Query: 1614 IRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IRLY+GLDKE  TWEDI K IGLSRERVRQVGL ALEKLK+ A K+++EAMLVK
Sbjct: 454  IRLYHGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            XP_011012458.1 PREDICTED: RNA polymerase sigma factor
            sigA [Populus euphratica]
          Length = 509

 Score =  552 bits (1423), Expect = 0.0
 Identities = 301/474 (63%), Positives = 357/474 (75%), Gaps = 7/474 (1%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRSD 551
            G T  P A+TKN +VAKKS N G  F S NR S SIKAL+EH+DT+SA SN   W +  D
Sbjct: 37   GITYCPTATTKNVVVAKKSSNYGPNFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFD 96

Query: 552  IXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVG-GYKKIEVTRSGTSAR 728
                                QKSMLEKQW+LSFE+    D+      KKI VT SG SAR
Sbjct: 97   -DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSAR 155

Query: 729  QRRTKPNTRKSLNRNASMTCLSK----RKRLSPEL-QSHSTGYVKGTVSEDLLSHAEVIR 893
            QRR   N RK+ N++  M+  S     R  +SP+L Q+   GYVKG VS+++L H EV+R
Sbjct: 156  QRRVN-NRRKNQNQSKFMSQSSDFKFLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVR 214

Query: 894  LSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSN 1073
            LS+ I+AG              GC+PSD+Q+A SLRIS ++L+ ++I+CSLARE LAMSN
Sbjct: 215  LSRIIRAGLSFEDHKSRLKERLGCEPSDEQIADSLRISRADLQAKLIQCSLAREKLAMSN 274

Query: 1074 VRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 1253
            VRLVMS+AQKYDNMG E+ADL+QGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL
Sbjct: 275  VRLVMSIAQKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL 334

Query: 1254 VENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKV 1433
            V+NSRTLRLP +LHERL LIRNAK RLEE G+TPSI+RIAESLNMS++KVRNATEA++KV
Sbjct: 335  VDNSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKV 394

Query: 1434 YSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREI 1613
            +SLDREAFP+LNG PGET  S+IAD+  ENNPWH +D W+LKEEVNK+I++TL ERE+EI
Sbjct: 395  FSLDREAFPSLNGLPGETHHSYIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEI 454

Query: 1614 IRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            IRLY+GLD+EC TWEDI K +GLSRERVRQVGL ALEKLK+ A KR  EAMLVK
Sbjct: 455  IRLYHGLDQECLTWEDISKRMGLSRERVRQVGLVALEKLKHAARKRNTEAMLVK 508


>AKC88633.1 sigma factor [Melianthus villosus]
          Length = 506

 Score =  552 bits (1422), Expect = 0.0
 Identities = 301/470 (64%), Positives = 353/470 (75%), Gaps = 7/470 (1%)
 Frame = +3

Query: 387  FPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNADIWHQRSDIXXX 563
            + A  TK  ++AKKS N    F S NR++QSIKAL+EH+D  S PS A+ W QRS+    
Sbjct: 38   YNATPTKTVVIAKKSSNCSPRFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSN-DVD 96

Query: 564  XXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVD-APVGGYKKIEVTRSGTSARQRRT 740
                            QKSMLEKQW+LSF++  L D       K+I VT SG SARQRR 
Sbjct: 97   EQNFDIEYSVEALLLLQKSMLEKQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRM 156

Query: 741  KPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDLLSHAEVIRLSKK 905
              N RK L+ N+SM   S+  RL     PEL Q+   GYVKG VSE+LLSHAEV+ LSKK
Sbjct: 157  S-NKRKILSENSSMMQTSRCNRLRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKK 215

Query: 906  IKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAMSNVRLV 1085
            IK G              GC+PSD+QLA+SLRIS +ELR + IE  LARE LAMSNVRLV
Sbjct: 216  IKCGLSLEEHKLRLKKRLGCEPSDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLV 275

Query: 1086 MSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENS 1265
            MS+AQ+YDNMG E++DL+QGGLI LLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENS
Sbjct: 276  MSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENS 335

Query: 1266 RTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMNKVYSLD 1445
            RTLRLPT+LHERL LIRNAK RLEE GITPSIER+AE LNMS+KK+RNATEA++KV+SLD
Sbjct: 336  RTLRLPTHLHERLGLIRNAKIRLEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLD 395

Query: 1446 REAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGEREREIIRLY 1625
            REAFP+LNG PGET  S+IAD+ L+NNPWH +D W+LK+EV K+I  TLGEREREIIRLY
Sbjct: 396  REAFPSLNGLPGETHHSYIADNCLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLY 455

Query: 1626 YGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            +GLD EC TWEDI K IGLSRERVRQVGL A+EKLK+ A ++ +EAMLVK
Sbjct: 456  HGLDNECLTWEDISKRIGLSRERVRQVGLVAMEKLKHAARRKHMEAMLVK 505


>XP_007219023.1 hypothetical protein PRUPE_ppa004393mg [Prunus persica] ONI26015.1
            hypothetical protein PRUPE_2G329700 [Prunus persica]
            ONI26016.1 hypothetical protein PRUPE_2G329700 [Prunus
            persica]
          Length = 512

 Score =  551 bits (1421), Expect = 0.0
 Identities = 304/476 (63%), Positives = 357/476 (75%), Gaps = 16/476 (3%)
 Frame = +3

Query: 396  ASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNA---------DIWHQR 545
            +STKN + A+K  N    F S NR  QSI+AL+EH+ T+SAPS+A         D+  + 
Sbjct: 45   SSTKNVVTARKPSNCSSRFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEES 104

Query: 546  SDIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVGGY-KKIEVTRSGTS 722
            SD+                   QKSMLEKQW+LSFE+  L D+      KKI VT SG S
Sbjct: 105  SDLEYSVEALLLL---------QKSMLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVS 155

Query: 723  ARQRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDLLSHAEV 887
            ARQRR     RK+ N++  +   S  K L    SPEL Q+H  GYVKG +SEDLL+H EV
Sbjct: 156  ARQRRMTSTKRKTFNKSTCVMHPSTNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEV 215

Query: 888  IRLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLARETLAM 1067
            +RLSKKIK G              GC+PSD+QLA+SLRIS ++L+ ++IEC LARE LAM
Sbjct: 216  VRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAM 275

Query: 1068 SNVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWIRQGVSR 1247
            SNVRLVMS+AQ+YDNMG E+ADLIQGGLI LLRGIEKFDSSKGFKISTYVYWWIRQGVSR
Sbjct: 276  SNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSR 335

Query: 1248 ALVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRNATEAMN 1427
            ALVENSRTLRLPT+LHERL LIRNAK RLEE GITPSI+RIAESLNMS+KKVRNATEA++
Sbjct: 336  ALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEAIS 395

Query: 1428 KVYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTTLGERER 1607
            KV+SLDR+AFP+LNG PGET  S+IAD+ LEN PWH +DAW+LKEEV+K+IN  LGERE+
Sbjct: 396  KVFSLDRDAFPSLNGLPGETHHSYIADNRLENIPWHGVDAWALKEEVSKLINMMLGEREK 455

Query: 1608 EIIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAMLVK 1775
            EII+LYYGL+ EC TWEDI K IGLSRERVRQVGL ALEKLK+ A KR +EAML+K
Sbjct: 456  EIIQLYYGLENECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKREMEAMLLK 511


>EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus communis]
          Length = 508

 Score =  551 bits (1419), Expect = 0.0
 Identities = 309/482 (64%), Positives = 361/482 (74%), Gaps = 15/482 (3%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNA-------- 527
            G T +   STK  IVAKKS N G  F S NR +QSIKAL+EH+DT+SAPS A        
Sbjct: 36   GLTHYQITSTKTLIVAKKSSNYGPSFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFN 95

Query: 528  DIWHQRSDIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVG-GYKKIEV 704
            D+  + SD+                   QKSMLEKQW+LSFE+    D+P     KKI V
Sbjct: 96   DMEEESSDLDYSVEALLLL---------QKSMLEKQWNLSFERTDSSDSPSRKSQKKIPV 146

Query: 705  TRSGTSARQRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDL 869
            T SG SARQRR     RK+L+++      +  K+L    SPEL Q+   GYVKG VSE+L
Sbjct: 147  TCSGVSARQRRINIR-RKNLSQSKFTVQANVFKQLKSAVSPELLQNRLKGYVKGVVSEEL 205

Query: 870  LSHAEVIRLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLA 1049
            LSHAEV+RLS+ IKAG              GCDPSD+Q+A+SL+IS +EL+ + I CSLA
Sbjct: 206  LSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLA 265

Query: 1050 RETLAMSNVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWI 1229
            RE LAMSNVRLVMS+AQ+YDNMG E+ADL+QGGLI LLRGIEKFDSSKGF+ISTYVYWWI
Sbjct: 266  REKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWI 325

Query: 1230 RQGVSRALVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRN 1409
            RQGVSRALVENSRTLRLP +LHERL LIRNAK RLEE G+TPSI+RIAESLN+S+KKVRN
Sbjct: 326  RQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNISQKKVRN 385

Query: 1410 ATEAMNKVYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTT 1589
            ATEA++KV+SLDREAFP+LNG PGET  S+IAD+ LENNPWH +D W+LK+EVNK+IN T
Sbjct: 386  ATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGVDDWALKDEVNKLINLT 445

Query: 1590 LGEREREIIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAML 1769
            L ERE+EIIRLYYGLD E  TWEDI K IGLSRERVRQVGL ALEKLK+ A K++LEAML
Sbjct: 446  LQEREQEIIRLYYGLDNESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKLEAML 505

Query: 1770 VK 1775
            VK
Sbjct: 506  VK 507


>XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis]
          Length = 509

 Score =  551 bits (1419), Expect = 0.0
 Identities = 309/482 (64%), Positives = 361/482 (74%), Gaps = 15/482 (3%)
 Frame = +3

Query: 375  GATQFPAASTKNAIVAKKSMNSGLGF-SCNRQSQSIKALEEHLDTSSAPSNA-------- 527
            G T +   STK  IVAKKS N G  F S NR +QSIKAL+EH+DT+SAPS A        
Sbjct: 37   GLTHYQITSTKTLIVAKKSSNYGPSFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFN 96

Query: 528  DIWHQRSDIXXXXXXXXXXXXXXXXXXXQKSMLEKQWSLSFEQAGLVDAPVG-GYKKIEV 704
            D+  + SD+                   QKSMLEKQW+LSFE+    D+P     KKI V
Sbjct: 97   DMEEESSDLDYSVEALLLL---------QKSMLEKQWNLSFERTDSSDSPSRKSQKKIPV 147

Query: 705  TRSGTSARQRRTKPNTRKSLNRNASMTCLSKRKRL----SPEL-QSHSTGYVKGTVSEDL 869
            T SG SARQRR     RK+L+++      +  K+L    SPEL Q+   GYVKG VSE+L
Sbjct: 148  TCSGVSARQRRINIR-RKNLSQSKFTVQANVFKQLKSAVSPELLQNRLKGYVKGVVSEEL 206

Query: 870  LSHAEVIRLSKKIKAGXXXXXXXXXXXXXXGCDPSDKQLASSLRISCSELRLQMIECSLA 1049
            LSHAEV+RLS+ IKAG              GCDPSD+Q+A+SL+IS +EL+ + I CSLA
Sbjct: 207  LSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLA 266

Query: 1050 RETLAMSNVRLVMSVAQKYDNMGTEIADLIQGGLISLLRGIEKFDSSKGFKISTYVYWWI 1229
            RE LAMSNVRLVMS+AQ+YDNMG E+ADL+QGGLI LLRGIEKFDSSKGF+ISTYVYWWI
Sbjct: 267  REKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWI 326

Query: 1230 RQGVSRALVENSRTLRLPTYLHERLILIRNAKTRLEEMGITPSIERIAESLNMSRKKVRN 1409
            RQGVSRALVENSRTLRLP +LHERL LIRNAK RLEE G+TPSI+RIAESLN+S+KKVRN
Sbjct: 327  RQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNISQKKVRN 386

Query: 1410 ATEAMNKVYSLDREAFPTLNGHPGETLRSFIADDNLENNPWHRIDAWSLKEEVNKIINTT 1589
            ATEA++KV+SLDREAFP+LNG PGET  S+IAD+ LENNPWH +D W+LK+EVNK+IN T
Sbjct: 387  ATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGVDDWALKDEVNKLINLT 446

Query: 1590 LGEREREIIRLYYGLDKECHTWEDIGKLIGLSRERVRQVGLAALEKLKNEASKRRLEAML 1769
            L ERE+EIIRLYYGLD E  TWEDI K IGLSRERVRQVGL ALEKLK+ A K++LEAML
Sbjct: 447  LQEREQEIIRLYYGLDNESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKLEAML 506

Query: 1770 VK 1775
            VK
Sbjct: 507  VK 508