BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00050447
         (303 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMO68562.1 reverse transcriptase [Corchorus capsularis]                55   1e-06
OMO51164.1 reverse transcriptase [Corchorus capsularis]                51   2e-06
XP_010684861.1 PREDICTED: uncharacterized protein LOC104899382 [...    54   4e-06
OMO60226.1 reverse transcriptase [Corchorus capsularis]                54   4e-06
OMO64412.1 reverse transcriptase [Corchorus capsularis]                51   7e-06

>OMO68562.1 reverse transcriptase [Corchorus capsularis]
          Length = 1439

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = -3

Query: 184 LDRVMCNARWLDKFKDCVV-NIPVACDSDNCPLKVVVEHELPQEP--RPFKFKSFWMKHD 14
           LDR +CN  W   F D +V N+P A  SD+CP+ + V   L + P  RPF+F++ W  HD
Sbjct: 566 LDRALCNVHWRHSFSDAIVRNLPRA-HSDHCPVAISVYGLLSRNPLTRPFRFEAAWQSHD 624

Query: 13  SY 8
           S+
Sbjct: 625 SF 626


>OMO51164.1 reverse transcriptase [Corchorus capsularis]
          Length = 1619

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 20/60 (33%), Positives = 37/60 (61%)
 Frame = -3

Query: 184 LDRVMCNARWLDKFKDCVVNIPVACDSDNCPLKVVVEHELPQEPRPFKFKSFWMKHDSYI 5
           LDR + N  WL+ +++ +V       SD+C + V ++ +    P+PF+F +FW KHD+++
Sbjct: 779 LDRALVNFSWLEAYQNSIVEFLAPEVSDHCAILVKLDSQNFSPPKPFRFFNFWTKHDNFM 838



 Score = 27.7 bits (60), Expect(2) = 2e-06
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 293 IVEFTDWVRMTELVEHPHSGSQFTWCRNWKRK 198
           I +F   +   +LV+H +SG  FTW   W ++
Sbjct: 742 ISDFNSCISQLDLVDHAYSGPLFTW---WNKR 770


>XP_010684861.1 PREDICTED: uncharacterized protein LOC104899382 [Beta vulgaris
           subsp. vulgaris]
          Length = 388

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -3

Query: 208 GREKEWLVLDRVMCNARWLDKFKDCVVNIPVACDSDNCPLKVVVEHELPQEPRPFKFKSF 29
           G  + +  +DRV+CN  W D FK+ +V       SD+CP  V ++ E+   PRPFKF + 
Sbjct: 44  GENRVFTKIDRVLCNDLWNDVFKEAIVVFMPEYISDHCPCIVHLDAEVRGRPRPFKFCNM 103

Query: 28  WMK 20
           W K
Sbjct: 104 WGK 106


>OMO60226.1 reverse transcriptase [Corchorus capsularis]
          Length = 888

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 184 LDRVMCNARWLDKFKDCVVNIPVACDSDNCPLKVVVEHELPQEPRPFKFKSFWMKHDSYI 5
           LDRV+ N+ WL  F + +V   +   SD+C + ++ + ++   P+PFKF +FW KHD ++
Sbjct: 195 LDRVLINSDWLLHFGNSMVEFLLPEISDHCLMNIITDVKIFSPPKPFKFFNFWTKHDDFL 254


>OMO64412.1 reverse transcriptase [Corchorus capsularis]
          Length = 1793

 Score = 50.8 bits (120), Expect(2) = 7e-06
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = -3

Query: 184  LDRVMCNARWLDKFKDCVVNIPVACDSDNCPLKVVVEHELPQEPRPFKFKSFWMKHDSYI 5
            LDRV+ NA WL  F D +V   +   SD+C + +  + +    P+PFKF ++W KH  ++
Sbjct: 1091 LDRVLINAEWLQCFADSMVEFMLPDVSDHCLMFIRTDVKFFSPPKPFKFFNYWTKHAEFL 1150



 Score = 26.2 bits (56), Expect(2) = 7e-06
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 293  IVEFTDWVRMTELVEHPHSGSQFTWCRN 210
            IVEF + +    + +H ++G  FTW  N
Sbjct: 1054 IVEFNECLNDISVFDHSYTGPIFTWYNN 1081