BLASTX nr result

ID: Lithospermum23_contig00050223 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00050223
         (341 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABH07510.1 chloroplast translation elongation factor, partial [N...    53   7e-06
XP_019247438.1 PREDICTED: elongation factor TuB, chloroplastic [...    53   8e-06

>ABH07510.1 chloroplast translation elongation factor, partial [Nicotiana
           attenuata]
          Length = 311

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +2

Query: 188 NTALKKPI--TKLILSSSFTPTPFTL-LHHTSPTKLNTFGTQFNVRAARGKFER 340
           NTA   P   +KLILSSSFTPTP TL LH  + T   T   +F VRAARGKFER
Sbjct: 31  NTAAVFPTNSSKLILSSSFTPTPSTLFLHSPTTTPSTTHPRRFTVRAARGKFER 84


>XP_019247438.1 PREDICTED: elongation factor TuB, chloroplastic [Nicotiana
           attenuata] OIT02173.1 elongation factor tub,
           chloroplastic [Nicotiana attenuata]
          Length = 485

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +2

Query: 188 NTALKKPI--TKLILSSSFTPTPFTL-LHHTSPTKLNTFGTQFNVRAARGKFER 340
           NTA   P   +KLILSSSFTPTP TL LH  + T   T   +F VRAARGKFER
Sbjct: 31  NTAAVFPTNSSKLILSSSFTPTPSTLFLHSPTTTPSTTHPRRFTVRAARGKFER 84


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