BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00050103
         (232 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009345820.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   5e-10
XP_008364127.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   1e-09
XP_016441969.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-08
XP_009608341.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-08
XP_011090595.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-08
CDP01388.1 unnamed protein product [Coffea canephora]                  59   2e-08
XP_002276540.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   4e-08
XP_019183482.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   5e-08
XP_008227123.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
XP_011021906.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
KYP74716.1 hypothetical protein KK1_007404 [Cajanus cajan]             57   1e-07
XP_004296690.2 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
XP_010939594.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
XP_008236584.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...    56   2e-07
XP_007212021.1 hypothetical protein PRUPE_ppa004899mg [Prunus pe...    56   2e-07
OIT18668.1 pentatricopeptide repeat-containing protein, chloropl...    55   2e-07
XP_010099914.1 hypothetical protein L484_020101 [Morus notabilis...    55   4e-07
XP_012845185.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   5e-07
KZV37620.1 pentatricopeptide repeat-containing protein chloropla...    55   5e-07
XP_002306340.2 pentatricopeptide repeat-containing family protei...    55   7e-07

>XP_009345820.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 486

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = +1

Query: 1   PHPIFPKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKY 180
           PHP+  K  +  IS  S+ P++ PG  RT              ++ +D K+P + TLNKY
Sbjct: 33  PHPLIRKRPRTQISCVSTRPKRNPG-PRTE-DPEVREVVRTLMRSFSD-KEPLLKTLNKY 89

Query: 181 VKMIRTEHCFMLFEELG 231
           VK++RTEHCFMLFEELG
Sbjct: 90  VKIVRTEHCFMLFEELG 106


>XP_008364127.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Malus domestica]
          Length = 486

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +1

Query: 1   PHPIFPKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKY 180
           PHP+  K  +  IS  S+ P++ PG       +          ++ +D K+P + TLNKY
Sbjct: 33  PHPLIRKRPRTRISCVSTRPKRNPGPKTEDPEVREVVRTLM--RSFSD-KEPLLKTLNKY 89

Query: 181 VKMIRTEHCFMLFEELG 231
           VK++RTEHCFMLFEELG
Sbjct: 90  VKIVRTEHCFMLFEELG 106


>XP_016441969.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Nicotiana tabacum]
          Length = 488

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = +1

Query: 37  ISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFML 216
           I   S+ P +  G + TR S           +N +D K+P V TLNKYVK +RTEHCF+L
Sbjct: 46  IRCVSTRPGRKSGTTSTRGSSEAQELVTLLMRNFSD-KKPLVSTLNKYVKFVRTEHCFLL 104

Query: 217 FEELG 231
           FEELG
Sbjct: 105 FEELG 109


>XP_009608341.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 488

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = +1

Query: 37  ISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFML 216
           I   S+ P +  G + TR S           +N +D K+P V TLNKYVK +RTEHCF+L
Sbjct: 46  IRCVSTRPGRKSGTTSTRGSSEEQELVTLLMRNFSD-KKPLVSTLNKYVKFVRTEHCFLL 104

Query: 217 FEELG 231
           FEELG
Sbjct: 105 FEELG 109


>XP_011090595.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Sesamum indicum]
          Length = 492

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 37/86 (43%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
 Frame = +1

Query: 1   PHPIFPKPHQKPISI---TSSMPRKTPGGSR------TRYSMXXXXXXXXXXKNINDSKQ 153
           P P F      P +I    S+ P+K PG  R      +  S           +N  D KQ
Sbjct: 27  PTPAFTHNPFPPSAIRMCASTQPKKIPGPKRINKKRGSSSSSEAEDLVRLLMRNFTD-KQ 85

Query: 154 PFVITLNKYVKMIRTEHCFMLFEELG 231
           P V TLNKYVK++RTEHCF+LFEELG
Sbjct: 86  PLVNTLNKYVKLVRTEHCFLLFEELG 111


>CDP01388.1 unnamed protein product [Coffea canephora]
          Length = 598

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +1

Query: 130 KNINDSKQPFVITLNKYVKMIRTEHCFMLFEELG 231
           +N ++ KQP V TLNKYVK++RTEHCF+LFEELG
Sbjct: 148 RNFDEKKQPLVATLNKYVKLVRTEHCFLLFEELG 181


>XP_002276540.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera] CBI21486.3 unnamed
           protein product, partial [Vitis vinifera]
          Length = 489

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = +1

Query: 16  PKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIR 195
           P+P    +S  S+ PR+ PG    +  +          KN    ++P + TLNKYVK+IR
Sbjct: 41  PRPSTTVVSCVSTRPRRKPGPKPDKSEVEELVRVLM--KNFG-GERPLISTLNKYVKVIR 97

Query: 196 TEHCFMLFEELG 231
           TEHCF LFEELG
Sbjct: 98  TEHCFRLFEELG 109


>XP_019183482.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Ipomoea nil] XP_019183491.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Ipomoea nil] XP_019183499.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Ipomoea nil]
          Length = 488

 Score = 57.8 bits (138), Expect = 5e-08
 Identities = 31/72 (43%), Positives = 39/72 (54%)
 Frame = +1

Query: 16  PKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIR 195
           P+     IS  S+  ++  G +    S            N  D K+P V TLNKYVKM+R
Sbjct: 37  PRKKTTIISCLSTQTKRKSGSASRSPSSEAEELVAQMMNNFTD-KKPLVATLNKYVKMVR 95

Query: 196 TEHCFMLFEELG 231
           TEHCF+LFEELG
Sbjct: 96  TEHCFLLFEELG 107


>XP_008227123.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Prunus mume]
          Length = 486

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = +1

Query: 1   PHPIFPKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKY 180
           PH +  K     IS  S+ P++ PG   T+                   K+P + TLNKY
Sbjct: 33  PHVLLRKRPMTRISCVSTRPKRKPG---TKTEDPDVREVVRMLMRSFSDKEPLLKTLNKY 89

Query: 181 VKMIRTEHCFMLFEELG 231
           V+++RTEHCF+LFEELG
Sbjct: 90  VRIVRTEHCFLLFEELG 106


>XP_011021906.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Populus euphratica]
          Length = 487

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 35/76 (46%), Positives = 44/76 (57%)
 Frame = +1

Query: 4   HPIFPKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYV 183
           HP+   P Q  +S  S+ P+K P    T              ++ +D KQP V TLNKYV
Sbjct: 34  HPMKYSPTQ--VSCVSTRPKKRP--VPTDDKSEAQELVRVLVRSFSD-KQPLVKTLNKYV 88

Query: 184 KMIRTEHCFMLFEELG 231
           K++RTEHCFMLFEELG
Sbjct: 89  KVMRTEHCFMLFEELG 104


>KYP74716.1 hypothetical protein KK1_007404 [Cajanus cajan]
          Length = 518

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = +1

Query: 16  PKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIR 195
           P  H +  S++      +P   +T ++           + I+D K+P V TLNKYVK++R
Sbjct: 17  PSSHPRAGSLSRVSCGPSPKRKKTSHNSEAQELVRLLTRKISD-KEPLVKTLNKYVKLVR 75

Query: 196 TEHCFMLFEELG 231
           TEHCF+LFEELG
Sbjct: 76  TEHCFLLFEELG 87


>XP_004296690.2 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 478

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = +1

Query: 37  ISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFML 216
           +S  S+  R+ PG  R   +           ++ +D K+P V TLNKYVK++RTEHCF+L
Sbjct: 34  VSCISTRFRRRPGTRRNPENSEAREMVRMLIRSFSD-KEPLVKTLNKYVKIVRTEHCFLL 92

Query: 217 FEELG 231
           FEELG
Sbjct: 93  FEELG 97


>XP_010939594.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Elaeis guineensis]
          Length = 487

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 27/64 (42%), Positives = 35/64 (54%)
 Frame = +1

Query: 40  SITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFMLF 219
           S  S+ P+K     +               +   D K+P V TL+KYVK++RTEHCFMLF
Sbjct: 44  SSVSTRPKKKKAAEKGNGQPEAEELVRVILRKAGDGKEPLVATLSKYVKVVRTEHCFMLF 103

Query: 220 EELG 231
           EELG
Sbjct: 104 EELG 107


>XP_008236584.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g39620, chloroplastic-like [Prunus mume]
          Length = 478

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = +1

Query: 1   PHPIFPKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKY 180
           PH +  K     IS  S+ P++ PG   T+                   K+P + TLNKY
Sbjct: 33  PHVLLRKRPVTRISCVSTRPKRKPG---TKTEDPDVREVVRMLMRSFSDKEPLLKTLNKY 89

Query: 181 VKMIRTEHCFMLFEELG 231
           V+++RTEHCF+LFEELG
Sbjct: 90  VRIVRTEHCFLLFEELG 106


>XP_007212021.1 hypothetical protein PRUPE_ppa004899mg [Prunus persica] ONI13666.1
           hypothetical protein PRUPE_4G236100 [Prunus persica]
          Length = 486

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = +1

Query: 1   PHPIFPKPHQKPISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKY 180
           PH +  K     IS  S+ P++ PG   T+                   K+P + TLNKY
Sbjct: 33  PHVLLRKRPVTRISCVSTRPKRKPG---TKTEDPDVREVVRMLMRSFSDKEPLLKTLNKY 89

Query: 181 VKMIRTEHCFMLFEELG 231
           V+++RTEHCF+LFEELG
Sbjct: 90  VRIVRTEHCFLLFEELG 106


>OIT18668.1 pentatricopeptide repeat-containing protein, chloroplastic
           [Nicotiana attenuata]
          Length = 171

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 130 KNINDSKQPFVITLNKYVKMIRTEHCFMLFEELG 231
           KN +D K+P V TLNKYVK +RTEHCF+LFEELG
Sbjct: 77  KNFSD-KKPLVSTLNKYVKFVRTEHCFLLFEELG 109


>XP_010099914.1 hypothetical protein L484_020101 [Morus notabilis] EXB80843.1
           hypothetical protein L484_020101 [Morus notabilis]
          Length = 485

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 130 KNINDSKQPFVITLNKYVKMIRTEHCFMLFEELG 231
           ++ N  K+P V TLNKYVK +RTEHCF+LFEELG
Sbjct: 72  RSFNSDKEPLVKTLNKYVKTVRTEHCFLLFEELG 105


>XP_012845185.1 PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Erythranthe guttata] EYU31068.1
           hypothetical protein MIMGU_mgv1a024034mg [Erythranthe
           guttata]
          Length = 496

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 29/58 (50%), Positives = 36/58 (62%)
 Frame = +1

Query: 58  PRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFMLFEELG 231
           PRKT   S +  S           +N +D KQP V TL+KYVK +RT+HCF+LFEELG
Sbjct: 57  PRKTHKRSTSSPSSEAEDLVKLIMRNFSD-KQPLVNTLDKYVKFVRTDHCFLLFEELG 113


>KZV37620.1 pentatricopeptide repeat-containing protein chloroplastic
           [Dorcoceras hygrometricum]
          Length = 497

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = +1

Query: 49  SSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFMLFEEL 228
           SS P++TP  S ++ S           KN  D KQP V TLNKYV+ +R EHCF LFEEL
Sbjct: 40  SSRPKRTPKRSVSQ-SSEEKELVRSIMKNFTD-KQPLVNTLNKYVRFVRMEHCFFLFEEL 97

Query: 229 G 231
           G
Sbjct: 98  G 98


>XP_002306340.2 pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] EEE93336.2 pentatricopeptide
           repeat-containing family protein, partial [Populus
           trichocarpa]
          Length = 414

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 31/65 (47%), Positives = 39/65 (60%)
 Frame = +1

Query: 37  ISITSSMPRKTPGGSRTRYSMXXXXXXXXXXKNINDSKQPFVITLNKYVKMIRTEHCFML 216
           +S  S+ P+K P    T              ++ +D KQP V TLNKYVK++RTEHCFML
Sbjct: 8   VSCVSTRPKKRP--VPTDEKSEAQELVRVLVRSFSD-KQPLVKTLNKYVKVMRTEHCFML 64

Query: 217 FEELG 231
           FEELG
Sbjct: 65  FEELG 69