BLASTX nr result
ID: Lithospermum23_contig00049395
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00049395
(411 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002513981.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 62 1e-08
XP_011012427.1 PREDICTED: RNA binding protein fox-1 homolog 2-li... 56 4e-07
XP_012838884.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 56 1e-06
XP_011012428.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 56 1e-06
KVH99705.1 Nucleotide-binding, alpha-beta plait, partial [Cynara... 56 1e-06
XP_002306558.1 RNA recognition motif-containing family protein [... 55 2e-06
XP_018833933.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 55 3e-06
XP_017244028.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 55 4e-06
KZV31581.1 28 kDa ribonucleoprotein, chloroplastic [Dorcoceras h... 55 4e-06
XP_011074215.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 54 5e-06
XP_019153381.1 PREDICTED: 31 kDa ribonucleoprotein, chloroplasti... 54 5e-06
XP_017639352.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 54 5e-06
XP_016701953.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 54 6e-06
XP_018833932.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 54 8e-06
XP_018846164.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 54 8e-06
XP_010026026.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplas... 54 8e-06
>XP_002513981.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Ricinus
communis] EEF48564.1 ribonucleoprotein, chloroplast,
putative [Ricinus communis]
Length = 305
Score = 62.0 bits (149), Expect = 1e-08
Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Frame = +1
Query: 136 LFNPLHIVFP---NKYFSFSLSCT---PKKTNVFVLHASTSSLQDXXXXXXXXXXXXXXX 297
L +P H F N FS S+S + P KT F++H S S+ QD
Sbjct: 27 LSSPFHKPFNQSNNNTFSLSISHSHIIPFKTKHFIVHFSASATQDPILEPQSLLESKTEK 86
Query: 298 XXXX----CFNARVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
RV+ NVPWNCT +DIR LF+KFGTVVD+E
Sbjct: 87 EQEQEQEEFSTTRVLASNVPWNCTTEDIRALFEKFGTVVDVE 128
>XP_011012427.1 PREDICTED: RNA binding protein fox-1 homolog 2-like [Populus
euphratica]
Length = 179
Score = 56.2 bits (134), Expect = 4e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R++ NVPWNCTA+DIR LFQKFGTVVD+E
Sbjct: 104 RLLASNVPWNCTAEDIRALFQKFGTVVDVE 133
>XP_012838884.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Erythranthe
guttata] EYU36476.1 hypothetical protein
MIMGU_mgv1a011581mg [Erythranthe guttata]
Length = 277
Score = 56.2 bits (134), Expect = 1e-06
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R++++NVPW CTADDIRPL +KFGTVVDIE
Sbjct: 86 RLLLQNVPWTCTADDIRPLVEKFGTVVDIE 115
>XP_011012428.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Populus
euphratica]
Length = 352
Score = 56.2 bits (134), Expect = 1e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R++ NVPWNCTA+DIR LFQKFGTVVD+E
Sbjct: 148 RLLASNVPWNCTAEDIRALFQKFGTVVDVE 177
>KVH99705.1 Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
var. scolymus]
Length = 268
Score = 55.8 bits (133), Expect = 1e-06
Identities = 22/30 (73%), Positives = 28/30 (93%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R++ +NVPW CTAD+IRPLF+K+GTVVDIE
Sbjct: 87 RLLAQNVPWTCTADEIRPLFEKYGTVVDIE 116
>XP_002306558.1 RNA recognition motif-containing family protein [Populus
trichocarpa] EEE93554.1 RNA recognition motif-containing
family protein [Populus trichocarpa]
Length = 309
Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R+ NVPWNCTA+DIR LFQKFGTVVD+E
Sbjct: 105 RLFASNVPWNCTAEDIRALFQKFGTVVDVE 134
>XP_018833933.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X2
[Juglans regia]
Length = 301
Score = 55.1 bits (131), Expect = 3e-06
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +1
Query: 175 FSFSLSCTPKKTNVFVLHASTSSLQDXXXXXXXXXXXXXXXXXXXCFNARVIVRNVPWNC 354
++ SL K+ FVLH S+++ + N R+I +NVPWNC
Sbjct: 48 YTHSLPVKSKRVKSFVLHFSSTAQEQALDSVSAQSKESEPAAEEFSRN-RLIAQNVPWNC 106
Query: 355 TADDIRPLFQKFGTVVDIE 411
T +DIR LF+K GTV+D+E
Sbjct: 107 TVEDIRALFEKHGTVLDVE 125
>XP_017244028.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Daucus carota
subsp. sativus] XP_017244029.1 PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic [Daucus carota subsp.
sativus] KZM99758.1 hypothetical protein DCAR_012880
[Daucus carota subsp. sativus]
Length = 298
Score = 54.7 bits (130), Expect = 4e-06
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
RV +NVPW+CTADDIRPLF+K+GTVV +E
Sbjct: 91 RVCAQNVPWDCTADDIRPLFEKYGTVVGVE 120
>KZV31581.1 28 kDa ribonucleoprotein, chloroplastic [Dorcoceras hygrometricum]
Length = 301
Score = 54.7 bits (130), Expect = 4e-06
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 316 NARVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
N R++V+NVPW C+ DDIRPLF+ +G+VVDIE
Sbjct: 85 NTRLLVQNVPWTCSVDDIRPLFENYGSVVDIE 116
>XP_011074215.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Sesamum
indicum]
Length = 269
Score = 54.3 bits (129), Expect = 5e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R++V+NVPW CT DDIRPLF +GTVVDIE
Sbjct: 79 RLLVQNVPWTCTVDDIRPLFANYGTVVDIE 108
>XP_019153381.1 PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Ipomoea nil]
Length = 290
Score = 54.3 bits (129), Expect = 5e-06
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +1
Query: 322 RVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
RV+ +NVPW TADD+RPLF+K+GTVVDIE
Sbjct: 94 RVVAQNVPWTSTADDLRPLFEKYGTVVDIE 123
>XP_017639352.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Gossypium
arboreum] KHF99254.1 29 kDa ribonucleoprotein B,
chloroplastic [Gossypium arboreum]
Length = 290
Score = 54.3 bits (129), Expect = 5e-06
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 316 NARVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
N R+I +NVPW+CT +DIR LF+K+GTVVD+E
Sbjct: 87 NTRLIAQNVPWSCTVEDIRSLFEKYGTVVDVE 118
>XP_016701953.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like, partial
[Gossypium hirsutum]
Length = 314
Score = 54.3 bits (129), Expect = 6e-06
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 316 NARVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
N R+I +NVPW+CT +DIR LF+K+GTVVD+E
Sbjct: 111 NTRLIAQNVPWSCTVEDIRSLFEKYGTVVDVE 142
>XP_018833932.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X1
[Juglans regia]
Length = 301
Score = 53.9 bits (128), Expect = 8e-06
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +1
Query: 175 FSFSLSCTPKKTNVFVLHASTSSLQDXXXXXXXXXXXXXXXXXXXCFNARVIVRNVPWNC 354
++ SLS K+ FVLH S+++ + N R+I +NVPWNC
Sbjct: 48 YTHSLSVKSKRVKSFVLHFSSTAQEQALDSVSAQSKESEPAAEEFSRN-RLIAQNVPWNC 106
Query: 355 TADDIRPLFQKFGTVVDIE 411
T +DI LF+K GTV+D+E
Sbjct: 107 TVEDICALFEKHGTVLDVE 125
>XP_018846164.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Juglans
regia]
Length = 304
Score = 53.9 bits (128), Expect = 8e-06
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +1
Query: 163 PNKYFSFSLSCTPKKTNVFVLHASTSSLQDXXXXXXXXXXXXXXXXXXXCFNARVIVRNV 342
P+ + +LS K+ FVL+ S+++ + R+I +NV
Sbjct: 46 PSPAHTHTLSAKAKRVRNFVLYFSSTAQEQALDSVSAQSDDSEPAPTEEFSRTRLIAQNV 105
Query: 343 PWNCTADDIRPLFQKFGTVVDIE 411
PW CT +DIR LF+K GTV+D+E
Sbjct: 106 PWTCTVEDIRALFEKHGTVLDVE 128
>XP_010026026.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Eucalyptus
grandis] KCW83088.1 hypothetical protein EUGRSUZ_B00046
[Eucalyptus grandis] KCW83089.1 hypothetical protein
EUGRSUZ_B00046 [Eucalyptus grandis]
Length = 307
Score = 53.9 bits (128), Expect = 8e-06
Identities = 31/97 (31%), Positives = 42/97 (43%)
Frame = +1
Query: 121 PNQPPLFNPLHIVFPNKYFSFSLSCTPKKTNVFVLHASTSSLQDXXXXXXXXXXXXXXXX 300
P PL L F LSC P T+ + +S+ D
Sbjct: 44 PASSPLRRSLESKSRRPSLLFRLSCAPSATSTLSVETQSSADDDGGARVEKEEEEAEFS- 102
Query: 301 XXXCFNARVIVRNVPWNCTADDIRPLFQKFGTVVDIE 411
R+I +NVPW CTA+D+R LF+K GTVV++E
Sbjct: 103 -----KTRLIAQNVPWTCTAEDVRSLFEKHGTVVEVE 134