BLASTX nr result

ID: Lithospermum23_contig00048932 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00048932
         (378 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002324022.1 hypothetical protein POPTR_0017s11130g [Populus t...    53   2e-06

>XP_002324022.1 hypothetical protein POPTR_0017s11130g [Populus trichocarpa]
           EEF04155.1 hypothetical protein POPTR_0017s11130g
           [Populus trichocarpa]
          Length = 103

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 36/103 (34%), Positives = 49/103 (47%)
 Frame = -3

Query: 376 RSSYSFRRQGSSGRVWTNKYKDLNSKYDFSPTCLEQVDDYSPEDIEQDNKDEKHREDEVV 197
           RSS SFRRQGSSGRVW N   +     +   T   +  + S   +   N DEK R  E +
Sbjct: 7   RSSVSFRRQGSSGRVWDNLQVNPKRSRELVDTPAGRSQEMS---LGNSNIDEKSRGQEFL 63

Query: 196 YGGSDQLGSSVSMQPILLRSKSERKAESCGCTSIWGSCTKPRT 68
               D+  ++ S  P     K + + E CG ++ W  CT P T
Sbjct: 64  ---GDEANTTSSYDP-PTPCKEKYRDERCGISNFWRCCTGPST 102


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