BLASTX nr result
ID: Lithospermum23_contig00048883
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00048883
(630 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABW81017.1 gag-pol polymerase, partial [Arabidopsis lyrata subsp... 142 2e-35
GAU36564.1 hypothetical protein TSUD_277700 [Trifolium subterran... 136 9e-34
JAU06319.1 Retrovirus-related Pol polyprotein from transposon TN... 127 1e-33
XP_014630692.1 PREDICTED: uncharacterized protein LOC100794785 [... 121 3e-28
XP_014632448.1 PREDICTED: uncharacterized protein LOC106799016 [... 105 3e-23
GAU45869.1 hypothetical protein TSUD_187020 [Trifolium subterran... 105 1e-22
KYP72325.1 Retrovirus-related Pol polyprotein from transposon TN... 104 2e-22
CAX68207.1 Copia-like retrotransposon [Helianthus annuus] 104 3e-22
XP_014623247.1 PREDICTED: uncharacterized protein LOC102661557 [... 103 3e-22
CAE05248.2 OSJNBb0115I09.10 [Oryza sativa Japonica Group] 99 2e-20
EEE67150.1 hypothetical protein OsJ_24213 [Oryza sativa Japonica... 99 2e-20
AAM19019.1 putative polyprotein [Oryza sativa Japonica Group] 99 2e-20
ABF99156.1 retrotransposon protein, putative, Ty1-copia subclass... 99 2e-20
AAS01944.1 putative retrotransposon protein [Oryza sativa Japoni... 99 3e-20
AAL75486.1 putative Fourf gag/pol protein [Zea mays] 99 3e-20
CAH66912.1 OSIGBa0126B18.5 [Oryza sativa Indica Group] 99 3e-20
ABG66024.1 retrotransposon protein, putative, Ty1-copia subclass... 98 4e-20
KYP33726.1 Retrovirus-related Pol polyprotein from transposon TN... 98 4e-20
ABB47865.2 retrotransposon protein, putative, Ty1-copia subclass... 98 4e-20
AAM95676.1 putative polyprotein [Oryza sativa Japonica Group] 98 4e-20
>ABW81017.1 gag-pol polymerase, partial [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 142 bits (357), Expect = 2e-35
Identities = 78/159 (49%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Frame = -1
Query: 474 NDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQVRRS 295
ND +V+T++ESRDA+FDENRF+TIPR ++L+ + + +G+ + + E+ +R+S
Sbjct: 663 NDSIAVHTVIESRDAIFDENRFSTIPRQKDLVPSSSGTKEGDDTFVPPN---ESPTLRKS 719
Query: 294 KRVRTYKDFGIDFFWFLGEGGR-ETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KEA 118
KR R K FG DF +L EG R ET SY Y++D + TF E M S D F KEA
Sbjct: 720 KRGRIEKSFGPDFQLYLVEGTRDETGFQYSYC---YHIDDEPRTFSEAMMSNDVIFWKEA 776
Query: 117 IDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
++DEM SIMGN W L LP GC P+ CKWIFKKK+KVD
Sbjct: 777 VNDEMDSIMGNNTWFLTDLPPGCKPLACKWIFKKKIKVD 815
>GAU36564.1 hypothetical protein TSUD_277700 [Trifolium subterraneum]
Length = 592
Score = 136 bits (342), Expect = 9e-34
Identities = 74/158 (46%), Positives = 101/158 (63%)
Frame = -1
Query: 474 NDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQVRRS 295
ND S+NTI+ES A+FDEN F++IPRP+ I ++ S + Y S ET + RRS
Sbjct: 354 NDSISINTIIESTVAIFDENCFSSIPRPKISIPNSDESLRDDHSYDVPS---ETLEPRRS 410
Query: 294 KRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KEAI 115
KR R + +G DF +L EG ++ Y Y+++ D T++E ++S D+ F KEAI
Sbjct: 411 KRARKSRSYGSDFQLYLVEGSKDQIETQYYY--CYSIEEDPRTYDEAVKSRDSIFWKEAI 468
Query: 114 DDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
D+E+ SIM N W L+ LP GC P+GCKWIFKKKMKVD
Sbjct: 469 DEEIGSIMENNTWVLSDLPPGCKPLGCKWIFKKKMKVD 506
Score = 72.8 bits (177), Expect = 2e-11
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -1
Query: 630 ESAKLLWDQLEARYMREDTRSKKFLVSHFNGYFMVDSRFVLEQFHELERIVG 475
ESAK LWD LEA+YM ED+ SKKFLV+ FN Y MV+SR V+EQF+EL RI+G
Sbjct: 122 ESAKELWDCLEAKYMAEDSSSKKFLVTDFNNYKMVESRSVMEQFNELLRILG 173
>JAU06319.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 166
Score = 127 bits (319), Expect = 1e-33
Identities = 75/157 (47%), Positives = 97/157 (61%), Gaps = 4/157 (2%)
Frame = -1
Query: 462 SVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQ----VRRS 295
+V+T++ESRDA+FDENRFT+IPRP++L+ DG + + S+ TS +RRS
Sbjct: 2 AVHTVIESRDAIFDENRFTSIPRPKDLVSFGTGQGDGTIVRSNISTCVPTSSESPVLRRS 61
Query: 294 KRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KEAI 115
KR R K FG +F +L EG R+ E V Y Y D TF E M S D F KEA+
Sbjct: 62 KRGRIEKSFGPEFQIYLVEGSRD-EIVVQYSYCYLVGDEPR-TFSEAMASIDVAFWKEAV 119
Query: 114 DDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKV 4
+DEM SI+GN + L LP GC +GCKWIF KKMK+
Sbjct: 120 NDEMDSIVGNNTYFLTDLPPGCKALGCKWIFTKKMKI 156
>XP_014630692.1 PREDICTED: uncharacterized protein LOC100794785 [Glycine max]
Length = 1142
Score = 121 bits (304), Expect = 3e-28
Identities = 72/168 (42%), Positives = 95/168 (56%)
Frame = -1
Query: 504 QFHELERIVGNDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSS 325
+F+ LE ND +VN+++ES DA+FDE RFT+IPRP++ M++ V
Sbjct: 100 RFYVLE---SNDSVAVNSVIESWDAIFDEQRFTSIPRPKD------MNSMSKVSVNIEDI 150
Query: 324 RGETSQVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRS 145
+++ R+S RVR K FG DF +L E R + N++ D TF E M S
Sbjct: 151 PSTSTETRKSTRVRKAKSFGDDFQLYLVE--RSRNDIEFQYQYCLNVEEDPKTFSEAMAS 208
Query: 144 PDAPF*KEAIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
D F KEAI EM SIM N KL LP GC P+GCK IF++KMKVD
Sbjct: 209 RDVVFWKEAIQSEMDSIMQNNTCKLVDLPPGCKPLGCKMIFRRKMKVD 256
>XP_014632448.1 PREDICTED: uncharacterized protein LOC106799016 [Glycine max]
Length = 385
Score = 105 bits (261), Expect = 3e-23
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Frame = -1
Query: 483 IVGNDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQV 304
I ND +VN+++ESRDA+FDE RFT+IPRP++ M++ V +++
Sbjct: 52 IGSNDSVAVNSVIESRDAIFDEQRFTSIPRPKD------MNSMSKVSVNIEDIPSTSTET 105
Query: 303 RRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*K 124
++S RVR K FG DF +L EG R + N++ D TF E M S D F K
Sbjct: 106 KKSTRVRKAKSFGDDFQLYLVEGSR--NDIEFQYQYCLNVEEDPKTFSEAMASRDVVFWK 163
Query: 123 EAIDDEMSSIMGNRVWKLASLPRG-CNPV 40
EAI EM SIM N WKL LP G C+P+
Sbjct: 164 EAIQSEMDSIMQNNTWKLVDLPPGYCSPI 192
>GAU45869.1 hypothetical protein TSUD_187020 [Trifolium subterraneum]
Length = 1007
Score = 105 bits (261), Expect = 1e-22
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Frame = -1
Query: 363 SNDGNVQYQHGSSR-GETSQVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYN 187
++D +++ H + ET + RRSKR R + +G DF +L EG ++ Y Y+
Sbjct: 364 NSDESLRDDHSYDKPSETLEPRRSKRARKSRSYGSDFQLYLVEGSKDQIETQYYY--CYS 421
Query: 186 LDYDHVTFEEPMRSPDAPF*KEAIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMK 7
++ D T++E ++S D+ F KEAID+E+ SIM N W L+ LP GC P+GCKWIFKKKMK
Sbjct: 422 IEEDPRTYDEAVKSRDSIFWKEAIDEEIGSIMENNTWVLSYLPPGCKPLGCKWIFKKKMK 481
Query: 6 VD 1
VD
Sbjct: 482 VD 483
Score = 71.6 bits (174), Expect = 5e-11
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = -1
Query: 630 ESAKLLWDQLEARYMREDTRSKKFLVSHFNGYFMVDSRFVLEQFHELERIVG 475
ESAK LWD LEA+YM +D+ SKKFLV+ FN Y MV+SR V+EQF+EL RI+G
Sbjct: 95 ESAKELWDCLEAKYMADDSSSKKFLVTDFNNYKMVESRSVMEQFNELLRILG 146
>KYP72325.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 565
Score = 104 bits (259), Expect = 2e-22
Identities = 63/154 (40%), Positives = 82/154 (53%)
Frame = -1
Query: 462 SVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQVRRSKRVR 283
S N IMESRDAVF EN F + + DT S S+ + + R SKR+R
Sbjct: 298 SNNIIMESRDAVFFENIFPLKNKLSKPVYDTSSS-----VLPSSSTVNKDFEPRISKRIR 352
Query: 282 TYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KEAIDDEM 103
KDFG +F+ FL L+ D T+ E MRS DAPF KEAI+DE+
Sbjct: 353 KAKDFGPEFYSFL-------------------LEDDPKTYSEAMRSVDAPFWKEAINDEI 393
Query: 102 SSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
S+ N+ W L LP GC +GCKW+F+KK++ D
Sbjct: 394 DSLKINKTWFLTDLPPGCKSIGCKWVFRKKLRTD 427
>CAX68207.1 Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 104 bits (259), Expect = 3e-22
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Frame = -1
Query: 450 IMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQV----RRSKRVR 283
++ESRD F EN+F+ D SN G R + S + R+S RVR
Sbjct: 764 VVESRDVEFFENKFSR---------DDENSN-GTTTSSTSEKRVQPSPIVEEPRKSTRVR 813
Query: 282 TYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KEAIDDEM 103
K +G DFF +L EG ++ V + NLD D TF E M S DAP KEA++DEM
Sbjct: 814 KEKSYGDDFFSYLVEGTQK--KVMREVIFAVNLDDDPKTFNEAMSSRDAPLWKEAVNDEM 871
Query: 102 SSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
SIMGN W+LA LP+G P+G KWIFK+K D
Sbjct: 872 DSIMGNGTWELADLPKGKKPIGSKWIFKRKYHPD 905
>XP_014623247.1 PREDICTED: uncharacterized protein LOC102661557 [Glycine max]
Length = 666
Score = 103 bits (258), Expect = 3e-22
Identities = 65/151 (43%), Positives = 84/151 (55%)
Frame = -1
Query: 504 QFHELERIVGNDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSS 325
+F+ LE ND +VN+I+ESRDA+FDE RFT+IPRP++ M++ V
Sbjct: 329 RFYVLE---SNDSVAVNSIIESRDAIFDEQRFTSIPRPKD------MNSMSKVSVNIEDI 379
Query: 324 RGETSQVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRS 145
+++ R+S RVR K FG DF +L EG R + N++ D TF E M S
Sbjct: 380 PLTSTETRKSTRVRKAKSFGDDFQLYLVEGSRN--DIEFQYQYCLNVEEDPKTFSEAMAS 437
Query: 144 PDAPF*KEAIDDEMSSIMGNRVWKLASLPRG 52
DA F KEAI EM SIM N WKL LP G
Sbjct: 438 RDAVFWKEAIQSEMDSIMQNNTWKLVDLPPG 468
>CAE05248.2 OSJNBb0115I09.10 [Oryza sativa Japonica Group]
Length = 1321
Score = 99.4 bits (246), Expect = 2e-20
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-------QVR 301
V TI+ESRDA F EN F P +T M ++ +H E + R
Sbjct: 726 VGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFAPIEHNDQTPEENPEKDNIVDTR 785
Query: 300 RSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KE 121
+SKR R K FG D+ +L +D T EE SPDA + KE
Sbjct: 786 KSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPDADYWKE 826
Query: 120 AIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A+ EM SIM N W++ P GC PVGCKW+FKKK+K D
Sbjct: 827 AVRSEMDSIMSNDTWEVVERPYGCKPVGCKWVFKKKLKPD 866
>EEE67150.1 hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
Length = 1028
Score = 99.0 bits (245), Expect = 2e-20
Identities = 59/168 (35%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Frame = -1
Query: 483 IVGNDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-- 310
++ N TI+E+RDA F EN F+ P +T M ++ +H E +
Sbjct: 425 LIVNSDMHAGTILETRDATFFENEFSMKYTPSTSSKETVMPHEHFAPIEHNDQTPEENPE 484
Query: 309 -----QVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRS 145
RRSKR R K FG D+ +L +D T EE S
Sbjct: 485 EDNIVDTRRSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSS 525
Query: 144 PDAPF*KEAIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
PDA + KEA+ EM SIM N W+ P GC PVGCKW+FKKK++ D
Sbjct: 526 PDADYWKEAVRSEMDSIMSNGTWEFVERPYGCKPVGCKWVFKKKLRPD 573
>AAM19019.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 99.0 bits (245), Expect = 2e-20
Identities = 59/160 (36%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-------QVR 301
V TI+ESRDA F EN F P +T M ++ +H E + R
Sbjct: 799 VGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFTPIEHNDQTPEENPEEDNIVDTR 858
Query: 300 RSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KE 121
+SKR R K FG D+ +L +D T EE SPDA + KE
Sbjct: 859 KSKRQRVVKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPDADYWKE 899
Query: 120 AIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A+ EM SIM N W++ P GC PVGCKW+FKKK++ D
Sbjct: 900 AVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPD 939
>ABF99156.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 99.0 bits (245), Expect = 2e-20
Identities = 59/160 (36%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-------QVR 301
V TI+ESRDA F EN F P +T M ++ +H E + R
Sbjct: 818 VGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFTPIEHNDQTPEENPEEDNIVDTR 877
Query: 300 RSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KE 121
+SKR R K FG D+ +L +D T EE SPDA + KE
Sbjct: 878 KSKRQRVVKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPDADYWKE 918
Query: 120 AIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A+ EM SIM N W++ P GC PVGCKW+FKKK++ D
Sbjct: 919 AVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPD 958
>AAS01944.1 putative retrotransposon protein [Oryza sativa Japonica Group]
ABF97221.1 retrotransposon protein, putative, Ty1-copia
subclass [Oryza sativa Japonica Group]
Length = 710
Score = 98.6 bits (244), Expect = 3e-20
Identities = 60/166 (36%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Frame = -1
Query: 477 GNDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS---- 310
G V TI+ESRDA F EN F P +T M ++ +H E +
Sbjct: 196 GLQELHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFAPIEHNDQTPEENPEED 255
Query: 309 ---QVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPD 139
R+SKR R K FG D+ +L +D T EE SPD
Sbjct: 256 NIVDTRKSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPD 296
Query: 138 APF*KEAIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A + KEA+ EM SIM N W++ P GC PVGCKW+FKKK++ D
Sbjct: 297 ADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPD 342
>AAL75486.1 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 98.6 bits (244), Expect = 3e-20
Identities = 63/165 (38%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRF------------TTIPRPRNLIVDTRMSNDGNVQYQHGSSRGE 316
V+TIMESRDA F EN F T IP L + + D +V H +
Sbjct: 722 VDTIMESRDATFFENEFPMKNTPSDISHETIIPHEHELSIPIDHAEDSHV---HIPEEDD 778
Query: 315 TSQVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDA 136
T R+SKR R K FG DF +L E T E SPDA
Sbjct: 779 TIVTRKSKRQRVAKSFGNDFIVYLVED-------------------TPTTISEAYFSPDA 819
Query: 135 PF*KEAIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
KEA+ EM SIM N W++ P GC P+GCKWIFKKK++ D
Sbjct: 820 DLWKEAVRSEMESIMSNGTWEVVDRPYGCQPIGCKWIFKKKLRPD 864
>CAH66912.1 OSIGBa0126B18.5 [Oryza sativa Indica Group]
Length = 1413
Score = 98.6 bits (244), Expect = 3e-20
Identities = 60/166 (36%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Frame = -1
Query: 477 GNDHYSVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS---- 310
G + V TI+ESRDA F EN F P +T M ++ +H E +
Sbjct: 812 GVPNMHVGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFAPIEHNDQTPEENPEED 871
Query: 309 ---QVRRSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPD 139
R+SKR R K FG D+ +L +D T EE SPD
Sbjct: 872 NIVDTRKSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPD 912
Query: 138 APF*KEAIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A + KEA+ EM SIM N W++ P GC PVGCKW+FKKK++ D
Sbjct: 913 ADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPD 958
>ABG66024.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 846
Score = 98.2 bits (243), Expect = 4e-20
Identities = 59/160 (36%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-------QVR 301
V TI+ESRDA F EN F P +T M ++ +H E + R
Sbjct: 323 VGTILESRDATFFENEFPMKHTPSTSSQETVMPHEHFAPIEHNDQTPEENPEEDNIVDTR 382
Query: 300 RSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KE 121
+SKR R K FG D+ +L +D T EE SPDA + KE
Sbjct: 383 KSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPDADYWKE 423
Query: 120 AIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
+ EM SIM N W++ P GC PVGCKW+FKKK+K D
Sbjct: 424 VVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLKPD 463
>KYP33726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 880
Score = 98.2 bits (243), Expect = 4e-20
Identities = 60/154 (38%), Positives = 79/154 (51%)
Frame = -1
Query: 462 SVNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETSQVRRSKRVR 283
S N IMESRDA+F EN F + + DT S S+ + + R SKR+R
Sbjct: 628 SNNIIMESRDAIFFENIFPLKNKLSKPVYDTSSSI-----LPSSSTVNKDFETRISKRIR 682
Query: 282 TYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KEAIDDEM 103
KDFG F+ FL L+ D T+ E MR DAPF KEAI+DE+
Sbjct: 683 KAKDFGPGFYSFL-------------------LENDPKTYSEAMRYVDAPFWKEAINDEI 723
Query: 102 SSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
S+ N+ W L L GC +GCKW+F+KK++ D
Sbjct: 724 DSLKINKTWFLTDLSPGCKSIGCKWVFRKKLRTD 757
>ABB47865.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1126
Score = 98.2 bits (243), Expect = 4e-20
Identities = 59/160 (36%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-------QVR 301
V TI+ESRDA F EN F P +T M ++ +H E + R
Sbjct: 562 VGTILESRDATFFENEFPMKYTPSTSSKETIMPHEHFAPIEHNDQTPEENPEEDNIVDTR 621
Query: 300 RSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KE 121
+SKR R K FG D+ +L +D T EE SPDA + KE
Sbjct: 622 KSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPDADYWKE 662
Query: 120 AIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A+ EM SIM N W++ P GC PVGCKW+FKKK++ D
Sbjct: 663 AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPD 702
>AAM95676.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1138
Score = 98.2 bits (243), Expect = 4e-20
Identities = 59/160 (36%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Frame = -1
Query: 459 VNTIMESRDAVFDENRFTTIPRPRNLIVDTRMSNDGNVQYQHGSSRGETS-------QVR 301
V TI+ESRDA F EN F P +T M ++ +H E + R
Sbjct: 574 VGTILESRDATFFENEFPMKYTPSTSSKETIMPHEHFAPIEHNDQTPEENPEEDNIVDTR 633
Query: 300 RSKRVRTYKDFGIDFFWFLGEGGRETESVNSYIPNYYNLDYDHVTFEEPMRSPDAPF*KE 121
+SKR R K FG D+ +L +D T EE SPDA + KE
Sbjct: 634 KSKRQRVAKSFGDDYIVYL-------------------VDDTPRTIEEAYSSPDADYWKE 674
Query: 120 AIDDEMSSIMGNRVWKLASLPRGCNPVGCKWIFKKKMKVD 1
A+ EM SIM N W++ P GC PVGCKW+FKKK++ D
Sbjct: 675 AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPD 714