BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00048129
         (278 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAG09097.1 Putative retroelement polyprotein [Arabidopsis thaliana]    73   4e-13
XP_010666727.1 PREDICTED: uncharacterized protein LOC104883860 [...    70   6e-12
AAD23883.1 putative retroelement pol polyprotein [Arabidopsis th...    64   9e-12
XP_010674610.1 PREDICTED: uncharacterized protein LOC104890733 [...    68   2e-11
XP_010412990.1 PREDICTED: uncharacterized protein LOC104699374 [...    68   2e-11
XP_010676001.1 PREDICTED: uncharacterized protein LOC104891911 [...    67   4e-11
XP_018435667.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p...    67   4e-11
JAU14893.1 hypothetical protein GA_TR19286_c9_g1_i1_g.62939, par...    63   6e-11
KYP63606.1 Retrovirus-related Pol polyprotein from transposon TN...    62   6e-11
AAD19784.1 putative retroelement pol polyprotein [Arabidopsis th...    64   7e-11
KYP36805.1 Retrovirus-related Pol polyprotein from transposon TN...    60   7e-11
XP_010420948.1 PREDICTED: uncharacterized protein LOC104706448 [...    67   8e-11
AAF79427.1 F18O14.19 [Arabidopsis thaliana]                            64   9e-11
KYP43576.1 Retrovirus-related Pol polyprotein from transposon TN...    60   9e-11
CAN82171.1 hypothetical protein VITISV_040546 [Vitis vinifera]         66   1e-10
AAD24600.1 putative retroelement pol polyprotein [Arabidopsis th...    66   1e-10
XP_010440137.1 PREDICTED: uncharacterized protein LOC104723459 [...    62   1e-10
XP_015868955.1 PREDICTED: uncharacterized protein LOC107406358 [...    66   1e-10
BAB10837.1 retroelement pol polyprotein-like [Arabidopsis thaliana]    66   1e-10
BAA97287.1 retroelement pol polyprotein-like [Arabidopsis thaliana]    61   2e-10

>AAG09097.1 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFNFVSSDSLN-KTCDVCYQAKQSRDCFVLSDNKTSLPF 278
           LWHQRLGHPS+K +  LPF+ V+S + + KTC++C QAKQ+RD F LS NKTS  F
Sbjct: 506 LWHQRLGHPSSKALHLLPFSDVTSSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAF 561


>XP_010666727.1 PREDICTED: uncharacterized protein LOC104883860 [Beta vulgaris
           subsp. vulgaris]
          Length = 475

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 31/55 (56%), Positives = 40/55 (72%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFNFVSSDSLNKTCDVCYQAKQSRDCFVLSDNKTSLPF 278
           LWHQR+GHPS K+V+ LP  F  +  LNK C++C++AK SRD F LSDN+ S  F
Sbjct: 414 LWHQRMGHPSEKVVKLLPPVFGLNGHLNKACEICFRAKHSRDKFPLSDNRASRIF 468


>AAD23883.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 64.3 bits (155), Expect(2) = 9e-12
 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 78  RVNTVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDSL-NKTCDVCYQAKQSRDCFVLS 254
           +++T     D  LWHQRLGHPS  ++ +LP    SS S+ +++CDVC++AKQ+R+ F +S
Sbjct: 78  KIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVGSRSCDVCFRAKQTREVFPVS 137

Query: 255 DNKT 266
            NK+
Sbjct: 138 TNKS 141



 Score = 32.7 bits (73), Expect(2) = 9e-12
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 1   DRFSRTLIGLGERMGRLYYLRAILT 75
           DRFSRTLIG GE    +YYL  + T
Sbjct: 52  DRFSRTLIGSGEERDGVYYLTDVAT 76


>XP_010674610.1 PREDICTED: uncharacterized protein LOC104890733 [Beta vulgaris
           subsp. vulgaris]
          Length = 585

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = +3

Query: 75  VRVNTVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDSLNKTCDVCYQAKQSRDCFVLS 254
           V +++V A  D  LWH+R+GHPS K+V+ LP       SLNK C++C++AK SRD F LS
Sbjct: 423 VSIHSVSA--DFELWHRRMGHPSEKVVKLLPPLCGHRGSLNKACEICFRAKHSRDKFPLS 480

Query: 255 DNKTSLPF 278
           DNK S  F
Sbjct: 481 DNKASRIF 488


>XP_010412990.1 PREDICTED: uncharacterized protein LOC104699374 [Camelina sativa]
          Length = 1511

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 33/51 (64%), Positives = 37/51 (72%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFNFVSSDSLNKTCDVCYQAKQSRDCFVLSDNKT 266
           LWH R+GHPSAK+V  LP   VSS  LNK CDVC +AKQ+R  F LS NKT
Sbjct: 535 LWHSRMGHPSAKVVCQLPAISVSSMHLNKACDVCLRAKQTRQSFPLSLNKT 585


>XP_010676001.1 PREDICTED: uncharacterized protein LOC104891911 [Beta vulgaris
           subsp. vulgaris]
          Length = 586

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = +3

Query: 81  VNTVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDSLNKTCDVCYQAKQSRDCFVLSDN 260
           V+ V A  D  LWH+R+GHPS K+V+ LP    S   LNK C+VC++AK  RD F LSD 
Sbjct: 476 VSAVEATSDVELWHRRMGHPSEKVVKLLPHVSSSRSGLNKGCEVCFRAKHHRDKFSLSDT 535

Query: 261 KTSLPF 278
             S  F
Sbjct: 536 TCSRIF 541


>XP_018435667.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108807944
            [Raphanus sativus]
          Length = 2649

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = +3

Query: 114  LWHQRLGHPSAKIVQTLPFNFVSSDS--LNKTCDVCYQAKQSRDCFVLSDNKTSLPF 278
            LWH+R+GHP+AK+V +LP    S+DS  LNK C+VC +AKQ+R CF +S NKT   F
Sbjct: 1691 LWHRRMGHPAAKVVCSLPVVSSSADSVFLNKACEVCLRAKQTRSCFPVSINKTMKVF 1747


>JAU14893.1 hypothetical protein GA_TR19286_c9_g1_i1_g.62939, partial [Noccaea
           caerulescens]
          Length = 91

 Score = 62.8 bits (151), Expect = 6e-11
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +3

Query: 78  RVNTVVARQDPVLWHQRLGHPSAKIVQTLP-FNFVSSDSLNKTCDVCYQAKQSRDCF 245
           R++  VA  D  LWHQRLGHPS+ ++ +LP F+ VS    +  CDVC++AKQ+R+ F
Sbjct: 34  RIHRAVADSDSTLWHQRLGHPSSSVLSSLPLFSGVSKPVCSGPCDVCFRAKQTREVF 90


>KYP63606.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 320

 Score = 62.4 bits (150), Expect(2) = 6e-11
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLP--FNFVSSDSLNKTCDVCYQAKQSRDCFVLSDNKTS 269
           LWH+RLGHPS KI + +P        D LNK CD+C++AKQSRD F LS++K +
Sbjct: 138 LWHKRLGHPSFKISKLIPELSENKCKDLLNKNCDICFRAKQSRDMFPLSEHKAN 191



 Score = 32.0 bits (71), Expect(2) = 6e-11
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 1   DRFSRTLIGLGERMGRLYYLRAI 69
           DR S+TLIG G+R+  LYY R +
Sbjct: 100 DRISKTLIGAGKRIDGLYYFRGV 122


>AAD19784.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 64.3 bits (155), Expect(2) = 7e-11
 Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +3

Query: 78  RVNTVVARQDPVLWHQRLGHPSAKIVQTLP-FNFVSSDSLNKTCDVCYQAKQSRDCFVLS 254
           +++T     D  LWHQRLGHPS  ++ +LP F+  SS   + +CDVC++AKQ+R+ F  S
Sbjct: 517 KIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTSSTVTSHSCDVCFRAKQTREVFPES 576

Query: 255 DNKT 266
            NKT
Sbjct: 577 INKT 580



 Score = 29.6 bits (65), Expect(2) = 7e-11
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 1   DRFSRTLIGLGERMGRLYYL 60
           DR S+TLIG GE  G +YYL
Sbjct: 491 DRSSKTLIGSGEERGGVYYL 510


>KYP36805.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 368

 Score = 60.5 bits (145), Expect(2) = 7e-11
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFN-FV-SSDSLNKTCDVCYQAKQSRDCFVLSDNKT 266
           LWH+RLGH S K +  LP   FV + DS N+ CD+C +AKQSR+ F +S+NK+
Sbjct: 119 LWHKRLGHASTKAINMLPITGFVPNKDSCNQVCDICLRAKQSRESFSISENKS 171



 Score = 33.5 bits (75), Expect(2) = 7e-11
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 1   DRFSRTLIGLGERMGRLYYLRAILT 75
           DR SR LIG+GE+   LYYLR I+T
Sbjct: 81  DRTSRMLIGVGEQREGLYYLRRIVT 105


>XP_010420948.1 PREDICTED: uncharacterized protein LOC104706448 [Camelina sativa]
          Length = 770

 Score = 66.6 bits (161), Expect = 8e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPF--NFVSSDSLNKTCDVCYQAKQSRDCFVLSDNKTSLPF 278
           LWH+R+GHPSAK++  LP   N VS  +LNK CDVC+ AK++R+ F LS NKTS  F
Sbjct: 354 LWHKRMGHPSAKVLGVLPCISNSVSVINLNKDCDVCFCAKKTRESFPLSMNKTSTIF 410


>AAF79427.1 F18O14.19 [Arabidopsis thaliana]
          Length = 1158

 Score = 63.9 bits (154), Expect(2) = 9e-11
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFN-FVSSDSLNKTCDVCYQAKQSRDCFVLSDNKTSLPF 278
           +WH+RLGHPS+K ++ L F+ F SS   +K C++C  AKQ+RD F LS NKTS  F
Sbjct: 302 VWHRRLGHPSSKAMEMLKFSDFSSSGFDSKDCEICISAKQTRDSFPLSSNKTSFAF 357



 Score = 29.6 bits (65), Expect(2) = 9e-11
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 1   DRFSRTLIGLGERMGRLYYLRAI 69
           DR ++TLIG GE++  LY+ R +
Sbjct: 264 DRITKTLIGAGEQLNGLYFFRGL 286


>KYP43576.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 289

 Score = 60.1 bits (144), Expect(2) = 9e-11
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFN-FVSS-DSLNKTCDVCYQAKQSRDCFVLSDNKT 266
           LWH+RLGH S K +  LP   FV + DS N+ CD+C +AKQSR+ F +S+NK+
Sbjct: 45  LWHKRLGHASTKAINMLPVTGFVQNKDSCNQVCDICLRAKQSRESFSISENKS 97



 Score = 33.5 bits (75), Expect(2) = 9e-11
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 1  DRFSRTLIGLGERMGRLYYLRAILT 75
          DR SR LIG+GE+   LYYLR I+T
Sbjct: 7  DRTSRMLIGVGEQREGLYYLRRIVT 31


>CAN82171.1 hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = +3

Query: 63  GDFDVRVNTVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDSLNKTCDVCYQAKQSRDC 242
           GD    V+   A     LWH R+GHPS K+V+ LP       SLNK C++C++AK  RD 
Sbjct: 246 GDSVQHVSVHNAASTLELWHNRMGHPSEKVVKLLPLVSNIKGSLNKACEICFRAKHPRDK 305

Query: 243 FVLSDNKTSLPF 278
           F LSDNK +  F
Sbjct: 306 FPLSDNKATRIF 317


>AAD24600.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +3

Query: 87  TVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDS--LNKTCDVCYQAKQSRDCFVLSDN 260
           TV   ++  LWH R+GHP+A++V  +P + VS  S  LNK CDVC++AKQ+R+ F LS N
Sbjct: 382 TVKEEKNYELWHSRMGHPAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFPLSIN 441

Query: 261 KT 266
           KT
Sbjct: 442 KT 443


>XP_010440137.1 PREDICTED: uncharacterized protein LOC104723459 [Camelina sativa]
          Length = 107

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +3

Query: 105 DPVLWHQRLGHPSAKIVQTLP-FNFVSSDSLNKTCDVCYQAKQSRDCFVLSDNKT 266
           D  LWH+RLGHPS  ++  LP FN VSS   + +CDVC+ AKQ+R+ F  S NKT
Sbjct: 49  DQALWHRRLGHPSFSVLSALPQFNRVSSTVSSSSCDVCFPAKQTREVFPDSFNKT 103


>XP_015868955.1 PREDICTED: uncharacterized protein LOC107406358 [Ziziphus jujuba]
          Length = 627

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/72 (44%), Positives = 42/72 (58%)
 Frame = +3

Query: 63  GDFDVRVNTVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDSLNKTCDVCYQAKQSRDC 242
           GD    V+   A     LWH+R+GHPS K+V+ LP       SLNK C++C+ AK  RD 
Sbjct: 269 GDLVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPLVSNLKGSLNKACEICFHAKHPRDK 328

Query: 243 FVLSDNKTSLPF 278
           F L+DNK +  F
Sbjct: 329 FPLNDNKANRIF 340


>BAB10837.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 114 LWHQRLGHPSAKIVQTLPFNFVSSDSLN-KTCDVCYQAKQSRDCFVLSDNKTSLPF 278
           LWH RLGHPS+K+++ L F+  +  + + KTC++C +AKQ+RD F LS+NKTS PF
Sbjct: 470 LWHCRLGHPSSKVLKLLSFSDSTGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPF 525


>BAA97287.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 81  VNTVVARQDPVLWHQRLGHPSAKIVQTLPFNFVSSDSL-NKTCDVCYQAKQSRDCFVLSD 257
           V+ V    D  LWHQRLGHPS  ++ +LP    SS S+ +++CDVC++AKQ+R+ F  S 
Sbjct: 501 VHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSS 560

Query: 258 NKTS 269
           NK++
Sbjct: 561 NKST 564



 Score = 31.6 bits (70), Expect(2) = 2e-10
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 1   DRFSRTLIGLGERMGRLYYL 60
           DRFSRTLIG GE    +YYL
Sbjct: 474 DRFSRTLIGTGEERDGVYYL 493