BLASTX nr result
ID: Lithospermum23_contig00046819
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00046819
(235 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019160963.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 69 7e-12
KVI02323.1 DNA mismatch repair protein MutS, core, partial [Cyna... 68 1e-11
XP_011012099.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_011012097.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_002317341.2 hypothetical protein POPTR_0011s09190g [Populus t... 68 2e-11
XP_011012096.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_011012095.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_011012094.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_011012093.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_011012092.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 68 2e-11
XP_009803943.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 67 2e-11
XP_016437799.1 PREDICTED: DNA mismatch repair protein MSH5-like ... 67 2e-11
XP_009803941.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 67 2e-11
XP_009803940.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 67 2e-11
XP_009803939.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 67 2e-11
XP_009803938.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 67 2e-11
XP_016437798.1 PREDICTED: DNA mismatch repair protein MSH5-like ... 67 2e-11
XP_016481734.1 PREDICTED: DNA mismatch repair protein MSH5-like ... 67 2e-11
XP_016481733.1 PREDICTED: DNA mismatch repair protein MSH5-like ... 67 2e-11
XP_018628509.1 PREDICTED: DNA mismatch repair protein MSH5 isofo... 67 2e-11
>XP_019160963.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Ipomoea
nil]
Length = 842
Score = 68.9 bits (167), Expect = 7e-12
Identities = 39/70 (55%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHATSRSLCLLDEFGKGTLTE DGIGLLG IN+
Sbjct: 668 RHATSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGVINH 700
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 701 FVSCYDPPKV 710
>KVI02323.1 DNA mismatch repair protein MutS, core, partial [Cynara cardunculus
var. scolymus]
Length = 777
Score = 68.2 bits (165), Expect = 1e-11
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHATSRSLCLLDEFGKGTLTE D +L++ + + DGIGLLG TI+Y
Sbjct: 679 RHATSRSLCLLDEFGKGTLTE---DDFILYANNATI---------SFLDGIGLLGGTIDY 726
Query: 54 FVSCNDPPKV 25
F S + PPKV
Sbjct: 727 FTSMHAPPKV 736
>XP_011012099.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X7 [Populus
euphratica] XP_011012100.1 PREDICTED: DNA mismatch
repair protein MSH5 isoform X7 [Populus euphratica]
Length = 677
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 506 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 538
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 539 FVACDDPPKV 548
>XP_011012097.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X6 [Populus
euphratica]
Length = 728
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 661 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 693
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 694 FVACDDPPKV 703
>XP_002317341.2 hypothetical protein POPTR_0011s09190g [Populus trichocarpa]
EEE97953.2 hypothetical protein POPTR_0011s09190g
[Populus trichocarpa]
Length = 791
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 620 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 652
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 653 FVACDDPPKV 662
>XP_011012096.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X5 [Populus
euphratica]
Length = 802
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 631 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 663
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 664 FVACDDPPKV 673
>XP_011012095.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X4 [Populus
euphratica]
Length = 803
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 632 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 664
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 665 FVACDDPPKV 674
>XP_011012094.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Populus
euphratica]
Length = 806
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 635 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 667
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 668 FVACDDPPKV 677
>XP_011012093.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Populus
euphratica]
Length = 807
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 636 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 668
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 669 FVACDDPPKV 678
>XP_011012092.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X1 [Populus
euphratica]
Length = 832
Score = 67.8 bits (164), Expect = 2e-11
Identities = 37/70 (52%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
R TSRSLCLLDEFGKGTLTE DGIGLLG T+NY
Sbjct: 661 RQTTSRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTVNY 693
Query: 54 FVSCNDPPKV 25
FV+C+DPPKV
Sbjct: 694 FVACDDPPKV 703
>XP_009803943.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X6 [Nicotiana
sylvestris]
Length = 650
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 467 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 499
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 500 FVSCYDPPKV 509
>XP_016437799.1 PREDICTED: DNA mismatch repair protein MSH5-like isoform X4
[Nicotiana tabacum]
Length = 679
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 506 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 538
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 539 FVSCYDPPKV 548
>XP_009803941.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X4 [Nicotiana
sylvestris]
Length = 682
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 499 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 531
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 532 FVSCYDPPKV 541
>XP_009803940.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Nicotiana
sylvestris]
Length = 689
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 506 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 538
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 539 FVSCYDPPKV 548
>XP_009803939.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Nicotiana
sylvestris]
Length = 689
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 516 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 548
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 549 FVSCYDPPKV 558
>XP_009803938.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X1 [Nicotiana
sylvestris]
Length = 699
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 516 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 548
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 549 FVSCYDPPKV 558
>XP_016437798.1 PREDICTED: DNA mismatch repair protein MSH5-like isoform X3
[Nicotiana tabacum]
Length = 702
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 529 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 561
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 562 FVSCYDPPKV 571
>XP_016481734.1 PREDICTED: DNA mismatch repair protein MSH5-like isoform X10
[Nicotiana tabacum]
Length = 712
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 539 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 571
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 572 FVSCYDPPKV 581
>XP_016481733.1 PREDICTED: DNA mismatch repair protein MSH5-like isoform X9
[Nicotiana tabacum]
Length = 740
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 567 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 599
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 600 FVSCYDPPKV 609
>XP_018628509.1 PREDICTED: DNA mismatch repair protein MSH5 isoform X10 [Nicotiana
tomentosiformis]
Length = 741
Score = 67.4 bits (163), Expect = 2e-11
Identities = 38/70 (54%), Positives = 40/70 (57%)
Frame = -2
Query: 234 RHATSRSLCLLDEFGKGTLTEG*CSDNLLHSIRFMLISTII*LCEMYSDGIGLLGRTINY 55
RHA+ RSLCLLDEFGKGTLTE DGIGLLG TIN+
Sbjct: 568 RHASPRSLCLLDEFGKGTLTE---------------------------DGIGLLGGTINH 600
Query: 54 FVSCNDPPKV 25
FVSC DPPKV
Sbjct: 601 FVSCYDPPKV 610