BLASTX nr result

ID: Lithospermum23_contig00046306 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00046306
         (301 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019242292.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   1e-08
OIT36779.1 pentatricopeptide repeat-containing protein, chloropl...    60   1e-08
XP_016493694.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   1e-08
XP_009793197.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   1e-08
XP_011071290.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   7e-08

>XP_019242292.1 PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Nicotiana attenuata]
          Length = 415

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +3

Query: 183 VKSGCLSSAIHLFDEMPHKDVITWNIMISGNNFYGFQQK 299
           VK G L+SA+HLF+EMP +DV+TWNIMISG + YGF +K
Sbjct: 55  VKYGSLTSALHLFEEMPKRDVVTWNIMISGYSHYGFPRK 93


>OIT36779.1 pentatricopeptide repeat-containing protein, chloroplastic
           [Nicotiana attenuata]
          Length = 665

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +3

Query: 183 VKSGCLSSAIHLFDEMPHKDVITWNIMISGNNFYGFQQK 299
           VK G L+SA+HLF+EMP +DV+TWNIMISG + YGF +K
Sbjct: 55  VKYGSLTSALHLFEEMPKRDVVTWNIMISGYSHYGFPRK 93


>XP_016493694.1 PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Nicotiana tabacum]
          Length = 678

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +3

Query: 183 VKSGCLSSAIHLFDEMPHKDVITWNIMISGNNFYGFQQK 299
           VK G L+SA+HLF+EMP +DV+TWNIMISG + YGF +K
Sbjct: 68  VKYGSLTSALHLFEEMPKRDVVTWNIMISGYSHYGFPRK 106


>XP_009793197.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Nicotiana sylvestris]
          Length = 1107

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +3

Query: 183 VKSGCLSSAIHLFDEMPHKDVITWNIMISGNNFYGFQQK 299
           VK G L+SA+HLF+EMP +DV+TWNIMISG + YGF +K
Sbjct: 55  VKYGSLTSALHLFEEMPKRDVVTWNIMISGYSHYGFPRK 93


>XP_011071290.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Sesamum indicum]
          Length = 675

 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +3

Query: 15  MKSRRLPPFATKIITILTAKHKPLQNPKSNPRIILLHNSKE-HXXXXXXXXXXXXXXVKS 191
           M+++ L     + IT    KHKPL     + R+  L ++K                 +KS
Sbjct: 1   MRNQNLVLSFARAITF-ALKHKPLLLSNFSLRVHTLCDNKHIDHANIYSYNRAIDNLLKS 59

Query: 192 GCLSSAIHLFDEMPHKDVITWNIMISGNNFYGF 290
           G L SA++LFD+MP +DVITWNIMISG   YGF
Sbjct: 60  GSLGSALNLFDQMPERDVITWNIMISGYYHYGF 92


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