BLASTX nr result
ID: Lithospermum23_contig00045588
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00045588
(262 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium ... 56 4e-07
JAT47559.1 Retrovirus-related Pol polyprotein LINE-1, partial [A... 55 5e-07
JAT65994.1 Putative ribonuclease H protein At1g65750, partial [A... 55 7e-07
AAC13599.1 similar to reverse transcriptase (Pfam: transcript_fa... 54 1e-06
XP_010513296.1 PREDICTED: uncharacterized protein LOC104789266 [... 54 2e-06
GAV92750.1 hypothetical protein CFOL_v3_36128, partial [Cephalot... 52 4e-06
XP_013689236.1 PREDICTED: uncharacterized protein LOC106393028 [... 53 5e-06
XP_018443265.1 PREDICTED: uncharacterized protein LOC108815104 [... 52 6e-06
BAB09379.1 non-LTR retroelement reverse transcriptase-like prote... 52 7e-06
XP_019238392.1 PREDICTED: uncharacterized protein LOC109218478 [... 52 8e-06
XP_019252827.1 PREDICTED: uncharacterized protein LOC109231636 [... 52 9e-06
XP_010419047.1 PREDICTED: uncharacterized protein LOC104704705 [... 52 9e-06
XP_010467312.1 PREDICTED: uncharacterized protein LOC104747378 [... 52 9e-06
>JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium amnicola]
Length = 1225
Score = 55.8 bits (133), Expect = 4e-07
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +2
Query: 77 LSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
L +I+G+ + LP+RYLG+PL +K +K C+ L++++R+ I+SW N FLS
Sbjct: 747 LPDILGVSESSLPVRYLGLPLFSKSLKDVHCQGLVDKVRRKISSWKNRFLS 797
>JAT47559.1 Retrovirus-related Pol polyprotein LINE-1, partial [Anthurium
amnicola]
Length = 447
Score = 55.5 bits (132), Expect = 5e-07
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +2
Query: 77 LSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
+ +I+G+ LP+RYLG+PL +K +KA C+ L+E++RK I+SW LS
Sbjct: 387 IPDILGVHENALPVRYLGLPLFSKSLKAAHCQNLVEKVRKKISSWNTRLLS 437
>JAT65994.1 Putative ribonuclease H protein At1g65750, partial [Anthurium
amnicola]
Length = 507
Score = 55.1 bits (131), Expect = 7e-07
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 86 IIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
I+G+ + LP+RYLG+PL +K +KA C+ L+E++RK I+SW LS
Sbjct: 195 ILGVNESALPVRYLGLPLFSKSLKASHCQSLVEKVRKKISSWKTRLLS 242
>AAC13599.1 similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 54.3 bits (129), Expect = 1e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +2
Query: 107 RLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
+LP+RYLG+PL +K++ A DC LIEQ+RK I +W + FLS
Sbjct: 654 KLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLS 694
>XP_010513296.1 PREDICTED: uncharacterized protein LOC104789266 [Camelina sativa]
Length = 549
Score = 53.5 bits (127), Expect = 2e-06
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 74 RLSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
RL ++ + LP+RYLG+PL +K+ DC L+ QIRK +N W + FLS
Sbjct: 85 RLQSLFNLNLVSLPVRYLGLPLCSKKFSVTDCDPLLSQIRKKLNCWTHKFLS 136
>GAV92750.1 hypothetical protein CFOL_v3_36128, partial [Cephalotus
follicularis]
Length = 191
Score = 52.0 bits (123), Expect = 4e-06
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Frame = +2
Query: 5 IL*NYFSFIKVQAILQACQ---------TRK*RLSNIIGIPTTRLPIRYLGIPLTAKQIK 157
+L N+ +Q L+ CQ TR+ R N++ IP LPIRYLG+PL + ++
Sbjct: 2 VLHNFADMSGLQPNLEKCQIFFGNVDSSTRR-RAINMLQIPEGSLPIRYLGLPLLSSKLS 60
Query: 158 AQDCRVLIEQIRKTINSW 211
DC+VL++++ K +SW
Sbjct: 61 KMDCKVLLDKLVKRTSSW 78
>XP_013689236.1 PREDICTED: uncharacterized protein LOC106393028 [Brassica napus]
Length = 522
Score = 52.8 bits (125), Expect = 5e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 92 GIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
GIP LP+RYLG+PL +K++ +C L +Q+R INSW + +LS
Sbjct: 160 GIPVGSLPVRYLGLPLNSKKLSIANCEPLWQQVRSKINSWTSKYLS 205
>XP_018443265.1 PREDICTED: uncharacterized protein LOC108815104 [Raphanus sativus]
Length = 393
Score = 52.4 bits (124), Expect = 6e-06
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +2
Query: 110 LPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
LP+RYLG+PL KQ+ QD + L+E+IRK IN W N FLS
Sbjct: 97 LPVRYLGLPLLTKQMGTQDYQPLLEKIRKRINLWTNRFLS 136
>BAB09379.1 non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 52.4 bits (124), Expect = 7e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 107 RLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
+LP+RYLG+PL K++ DC L+EQ+RK I SW + FLS
Sbjct: 766 QLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLS 806
>XP_019238392.1 PREDICTED: uncharacterized protein LOC109218478 [Nicotiana
attenuata]
Length = 409
Score = 52.0 bits (123), Expect = 8e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 77 LSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
L IIG LP RYLG+P++AK+I + DC +L+++I I SWG+ LS
Sbjct: 190 LCEIIGYKRGALPFRYLGVPISAKKISSVDCEMLVDKICARIKSWGSRNLS 240
>XP_019252827.1 PREDICTED: uncharacterized protein LOC109231636 [Nicotiana
attenuata]
Length = 771
Score = 52.0 bits (123), Expect = 9e-06
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2
Query: 77 LSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
LS I G RL +YLG+P+++K+I DC+VL++++ INSWG LS
Sbjct: 646 LSEITGYSRGRLQFKYLGVPISSKKISKMDCQVLVDKMAARINSWGTRNLS 696
>XP_010419047.1 PREDICTED: uncharacterized protein LOC104704705 [Camelina sativa]
Length = 1141
Score = 52.0 bits (123), Expect = 9e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +2
Query: 74 RLSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
++S+ + + LPIRYLG+PL ++++ +DC L+ +IR +NSW ++FLS
Sbjct: 850 QISSTFNLTPSPLPIRYLGLPLCSRKLSVKDCDPLLSKIRMKMNSWTHMFLS 901
>XP_010467312.1 PREDICTED: uncharacterized protein LOC104747378 [Camelina sativa]
Length = 1258
Score = 52.0 bits (123), Expect = 9e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 77 LSNIIGIPTTRLPIRYLGIPLTAKQIKAQDCRVLIEQIRKTINSWGNIFLS 229
+ N +LP+RYLG+PL K++ DC LIEQ++K I SW FLS
Sbjct: 878 VENSFSFEVGQLPVRYLGLPLVTKRLSLSDCAPLIEQLKKRIGSWTARFLS 928