BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00045446
         (440 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...   159   2e-42
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...   118   3e-29
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...   118   4e-29
KYP69992.1 Retrovirus-related Pol polyprotein from transposon TN...   115   2e-28
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN...   105   2e-24
KYP64816.1 Retrovirus-related Pol polyprotein from transposon TN...   102   6e-24
EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theo...   105   1e-23
EOY09126.1 Uncharacterized protein TCM_024518 [Theobroma cacao]       101   3e-23
KYP53379.1 Retrovirus-related Pol polyprotein from transposon TN...   101   3e-23
XP_008351909.1 PREDICTED: transcription initiation factor TFIID ...   102   6e-23
KYP50610.1 Retrovirus-related Pol polyprotein from transposon TN...    97   3e-22
KYP35896.1 Retrovirus-related Pol polyprotein from transposon TN...    96   1e-21
KYP54750.1 Retrovirus-related Pol polyprotein from transposon TN...    92   3e-21
EOY34202.1 Uncharacterized protein TCM_041944 [Theobroma cacao]        99   3e-21
CAN60557.1 hypothetical protein VITISV_035871 [Vitis vinifera]         91   5e-21
KCW45629.1 hypothetical protein EUGRSUZ_L00625 [Eucalyptus grandis]    90   8e-21
KCW80303.1 hypothetical protein EUGRSUZ_C01663 [Eucalyptus grandis]    89   4e-20
KYP59893.1 Retrovirus-related Pol polyprotein from transposon TN...    96   4e-20
KYP38865.1 Retrovirus-related Pol polyprotein from transposon TN...    90   1e-19
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...    94   2e-19

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score =  159 bits (402), Expect = 2e-42
 Identities = 79/108 (73%), Positives = 93/108 (86%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLPNNMARLEEKAHSTL 294
           MS   +KI +FTGRNSFSLWQIK+RALLK++G WAPL K+  A++   MA LEEKAHST+
Sbjct: 1   MSALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEKAHSTI 60

Query: 295 ILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           +L L D+VITEVS+E+T AGLWLKLESLYMTKSLTNKLLLK+RLFGLR
Sbjct: 61  MLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLR 108


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score =  118 bits (295), Expect = 3e-29
 Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 13/115 (11%)
 Frame = +1

Query: 130 IKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM-------------KNPPALLPNNMARL 270
           I+I++F G+NSF+LW+IK+RALLK + +WAPL              +   A     +A  
Sbjct: 7   IRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQ 66

Query: 271 EEKAHSTLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGL 435
           EEKAHS ++L+L DEV+ EV++E+T +GLW KLE LYMTKS+ NKLLLK RLFGL
Sbjct: 67  EEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGL 121


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  118 bits (295), Expect = 4e-29
 Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 13/115 (11%)
 Frame = +1

Query: 130 IKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM-------------KNPPALLPNNMARL 270
           I+I++F G+NSF+LW+IK+RALLK + +WAPL              +   A     +A  
Sbjct: 7   IRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQ 66

Query: 271 EEKAHSTLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGL 435
           EEKAHS ++L+L DEV+ EV++E+T +GLW KLE LYMTKS+ NKLLLK RLFGL
Sbjct: 67  EEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGL 121


>KYP69992.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score =  115 bits (288), Expect = 2e-28
 Identities = 57/115 (49%), Positives = 79/115 (68%), Gaps = 13/115 (11%)
 Frame = +1

Query: 130 IKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM-------------KNPPALLPNNMARL 270
           IKI++F G+NSF+LW+IK+ ALLK + +W PL                  ++   ++A  
Sbjct: 5   IKIEKFNGKNSFNLWRIKMHALLKEQRVWGPLATTSVKKESKTELSNKSTSIKKEDLAEQ 64

Query: 271 EEKAHSTLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGL 435
           EEKAHS ++L+L +EV+ EV++++T  GLWLKLE LYMTKS+ NKLLLK RLFGL
Sbjct: 65  EEKAHSLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGL 119


>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score =  105 bits (261), Expect = 2e-24
 Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = +1

Query: 121 GEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM---KNPPALLPNNMARLEEKAHST 291
           G    +++FTG N FSL +IK++ALL  +GL   L    K P  L       L  KAHST
Sbjct: 2   GTRFDVEKFTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHST 61

Query: 292 LILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           +IL+L DEV+ EV+EE + AG+WLKLESLYMTKSLTNKL LK+RL  L+
Sbjct: 62  IILSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLK 110


>KYP64816.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 252

 Score =  102 bits (254), Expect = 6e-24
 Identities = 51/111 (45%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM---KNPPALLPNNMARLEEKAH 285
           M     ++++FTG+N F LW++K+RALL  +GL   L    K   A +     +++EKAH
Sbjct: 1   MGSAKYEVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAH 60

Query: 286 STLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           S +IL+L D+V+ +VS+E T AG+W KLESLYMTKSL N+L LK+ L+  +
Sbjct: 61  SAIILSLGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFK 111


>EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score =  105 bits (262), Expect = 1e-23
 Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 5/116 (4%)
 Frame = +1

Query: 106 AKKMSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLPNNMAR-----L 270
           A   S    +I++F GRN FSLW++K+RALL ++GL   L       LP+N++      L
Sbjct: 122 AMATSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEH--LPSNLSDGEKDDL 179

Query: 271 EEKAHSTLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
            +KAHS ++LAL DEV+ EV++E++ A +W KLES+YMTKSLTN+L +K+RL+ L+
Sbjct: 180 MKKAHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLK 235


>EOY09126.1 Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score =  101 bits (251), Expect = 3e-23
 Identities = 51/107 (47%), Positives = 77/107 (71%), Gaps = 5/107 (4%)
 Frame = +1

Query: 133 KIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLPNNMARLE-----EKAHSTLI 297
           +I++F GRN FSLW++K+ ALL ++GL   L       LP+N++  E     EKAHS ++
Sbjct: 9   EIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEH--LPSNLSDSEKDDLMEKAHSAIL 66

Query: 298 LALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           L L DEV+ EV++E++ A +W KLES+Y+TKSLTN+L +K+RL+ L+
Sbjct: 67  LTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLK 113


>KYP53379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score =  101 bits (252), Expect = 3e-23
 Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM---KNPPALLPNNMARLEEKAH 285
           M     ++++FTG+N F LW++K+RALL  +GL   L    K   A +     +++EKAH
Sbjct: 1   MGSTKYEVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAH 60

Query: 286 STLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLF 429
           S +IL+L D+V+ +VS+E T AG+W KLESLYMTKSL N+L LK+ L+
Sbjct: 61  SAIILSLGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLY 108


>XP_008351909.1 PREDICTED: transcription initiation factor TFIID subunit 2-like
           [Malus domestica]
          Length = 454

 Score =  102 bits (255), Expect = 6e-23
 Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
 Frame = +1

Query: 136 IKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLPNNMARLEE-----KAHSTLIL 300
           I++F GRN FSLW++K+RA+L ++GL   L       LP + +  E+     +AHS ++L
Sbjct: 7   IEKFNGRNDFSLWRVKMRAVLVQQGLLKALQG--VEALPQDWSAEEKEDALNRAHSAIML 64

Query: 301 ALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           +L DEV+ E+  E T AGLWLKLES+YMTKSLTN+L LK+RL+ LR
Sbjct: 65  SLSDEVLREMENETTAAGLWLKLESIYMTKSLTNRLYLKQRLYTLR 110


>KYP50610.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 210

 Score = 97.1 bits (240), Expect = 3e-22
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 13/106 (12%)
 Frame = +1

Query: 130 IKIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNP-------------PALLPNNMARL 270
           IKI++F G+NSF+LW+IK+RALLK + +W PL                  ++   + A  
Sbjct: 5   IKIEKFNGKNSFNLWRIKMRALLKEQRVWGPLATTSVKKERKTELSDKSTSIKKEDHAEQ 64

Query: 271 EEKAHSTLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKL 408
           EEKAHS ++L+L DEV+ EV++++T  GLWLKLE LYMTK +  K+
Sbjct: 65  EEKAHSLILLSLSDEVLYEVADQETACGLWLKLEKLYMTKDIDVKI 110


>KYP35896.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 208

 Score = 95.5 bits (236), Expect = 1e-21
 Identities = 45/105 (42%), Positives = 69/105 (65%), Gaps = 12/105 (11%)
 Frame = +1

Query: 130 IKIKRFTGRNSFSLWQIKVRALLKREGLWAPLM------------KNPPALLPNNMARLE 273
           I+I++F G+N+F+LW+IK+RALLK + +W PL                 ++   ++A  E
Sbjct: 4   IRIEKFNGKNNFNLWRIKMRALLKEQRVWGPLATTSIKKESKTESSKSTSIKKEDLAEQE 63

Query: 274 EKAHSTLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKL 408
           EK HS ++L+L DEV+ EV++++T  GLWLKLE LYMTK +  K+
Sbjct: 64  EKTHSLILLSLSDEVLYEVADQETACGLWLKLEKLYMTKDIDVKI 108


>KYP54750.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 142

 Score = 92.4 bits (228), Expect = 3e-21
 Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLW--APLMKNPPALLPNNMARLEEKAHS 288
           M     ++++FT +N F LW++K+R+LL  +GL    P    P  ++ N   ++ EKAHS
Sbjct: 1   MGSAMFQVEKFTCQNDFGLWRLKMRSLLVHQGLVDALPGKAKPEDVMINEEKKMLEKAHS 60

Query: 289 TLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
            +I++L D+V+ +V++E T  G+W KLE LYMTKSL N+L LK+ L+  +
Sbjct: 61  AIIMSLGDKVLRQVAKEKTTIGVWSKLEGLYMTKSLVNRLYLKQDLYSFK 110


>EOY34202.1 Uncharacterized protein TCM_041944 [Theobroma cacao]
          Length = 698

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 4/106 (3%)
 Frame = +1

Query: 133 KIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKNPPALLPN----NMARLEEKAHSTLIL 300
           +I++F GRN FSLW +K+ ALL ++GL   L K    LL N        L EKAHS ++L
Sbjct: 9   EIEKFNGRNDFSLWCVKMCALLVQQGLLKAL-KEKEHLLSNLSNGEKDNLMEKAHSAILL 67

Query: 301 ALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           AL DEVI EV++E++   +WLKL+S+YMTKSL N+L +K+RL+ L+
Sbjct: 68  ALSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLK 113


>CAN60557.1 hypothetical protein VITISV_035871 [Vitis vinifera]
          Length = 110

 Score = 90.9 bits (224), Expect = 5e-21
 Identities = 46/101 (45%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
 Frame = +1

Query: 136 IKRFTGRNSFSLWQIKVRALLKREGLWAPLMKN---PPALLPNNMARLEEKAHSTLILAL 306
           I++F+G++ F LW++K++ALL ++GL   L      P  L       + EKA S +IL+L
Sbjct: 8   IEKFSGKSDFGLWRVKMKALLVQQGLQDALKGEKDIPKTLSEKEKNDILEKAQSAIILSL 67

Query: 307 DDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLF 429
            D+ + EVS+E + A +WLKLE LYMTKSL N+L LK+RL+
Sbjct: 68  GDKALREVSKETSAAAIWLKLEKLYMTKSLANRLYLKQRLY 108


>KCW45629.1 hypothetical protein EUGRSUZ_L00625 [Eucalyptus grandis]
          Length = 101

 Score = 90.1 bits (222), Expect = 8e-21
 Identities = 49/98 (50%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
 Frame = +1

Query: 130 IKIKR-FTGRNSFSLWQIKVRALLKREGLWAPLMKN-PPALLPNNMARLEEKAHSTLILA 303
           IK K  F G+N+F LW+IK++ LL+REG    L +N P  +   ++  +EEKAHST+ L+
Sbjct: 4   IKFKAPFDGQNNFGLWRIKMKVLLRREGSVRALNRNYPNDMTTADIKDMEEKAHSTIQLS 63

Query: 304 LDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLK 417
           L D+V  EV++E  V+GLW KLESLY+ KS+T +L LK
Sbjct: 64  LSDKVPREVADEKRVSGLWNKLESLYIKKSITTRLFLK 101


>KCW80303.1 hypothetical protein EUGRSUZ_C01663 [Eucalyptus grandis]
          Length = 117

 Score = 89.0 bits (219), Expect = 4e-20
 Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPLMKN-PPALLPNNMARLEEKAHST 291
           M+    K+  F  +N+F LW+I + ALL  EGL   L +N P  +    +  +++KAHS 
Sbjct: 1   MASIKFKVTSFDDQNNFELWRINMSALLHSEGLVRALDRNYPDDMTSAEIKEMDKKAHSI 60

Query: 292 LILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGLR 438
           + L+L D+V  EV++E+TV GLW KLESLYM KSL  +L LK  L+ L+
Sbjct: 61  IQLSLSDKVFHEVTDEETVLGLWNKLESLYMKKSLKIRLFLKHLLYALK 109


>KYP59893.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 13/97 (13%)
 Frame = +1

Query: 184 VRALLKREGLWAPLM-------------KNPPALLPNNMARLEEKAHSTLILALDDEVIT 324
           +RALLK + +W PL+             + P ++   ++A  EEKAHS ++L+L DEV+ 
Sbjct: 1   MRALLKEQRVWGPLVSVSAKKENIAKSEEKPTSVKNEDLAEQEEKAHSLILLSLSDEVLY 60

Query: 325 EVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGL 435
           EV++++T +GLWLKLE LYMTKS+ NKLLLK RLFGL
Sbjct: 61  EVADQETASGLWLKLEKLYMTKSICNKLLLKRRLFGL 97


>KYP38865.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan] KYP38876.1 Retrovirus-related Pol
           polyprotein from transposon TNT 1-94 [Cajanus cajan]
          Length = 212

 Score = 90.1 bits (222), Expect = 1e-19
 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
 Frame = +1

Query: 184 VRALLKREGLWAPLMKNP-------------PALLPNNMARLEEKAHSTLILALDDEVIT 324
           +RALLK + +W PL                  ++   ++A  EEKAHS ++L+L DEV+ 
Sbjct: 1   MRALLKEQRVWGPLATTSVKKESKTELSDKSTSIKKEDLAEQEEKAHSLILLSLSDEVLY 60

Query: 325 EVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGL 435
           EV++++T  GLWLKLE LYMTKS+ NKL+LK RLFGL
Sbjct: 61  EVADQETACGLWLKLEKLYMTKSVCNKLMLKRRLFGL 97


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease CAA32025.1 unnamed protein product
           [Nicotiana tabacum]
          Length = 1328

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +1

Query: 115 MSGEGIKIKRFTGRNSFSLWQIKVRALLKREGLWAPL---MKNPPALLPNNMARLEEKAH 285
           MSG   ++ +F G N FS WQ ++R LL ++GL   L    K P  +   + A L+E+A 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 286 STLILALDDEVITEVSEEDTVAGLWLKLESLYMTKSLTNKLLLKERLFGL 435
           S + L L D+V+  + +EDT  G+W +LESLYM+K+LTNKL LK++L+ L
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYAL 110