BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00045323
         (381 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis tha...    55   5e-09
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r...    58   2e-07
KRY06569.1 Retrovirus-related Pol polyprotein from transposon TN...    50   1e-06
EMS53304.1 hypothetical protein TRIUR3_14429 [Triticum urartu]         52   5e-06

>OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis thaliana]
          Length = 370

 Score = 55.1 bits (131), Expect(3) = 5e-09
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
 Frame = -1

Query: 249 QPTLRRFERNRR*PNHWYGE-------AFLVESHESTSYEEAITSTDTDTRLIVMKSDMD 91
           +P +RR ER+R  P+  +G+        F++ES E TSYEEA+   D+D  L   K +M+
Sbjct: 214 EPEVRRSERSRHKPDR-FGDWVMDDHALFIIESDEPTSYEEAMMGPDSDKWLEAAKFEME 272

Query: 90  SMYQKKV*SLLDLLNGV 40
           SM Q KV +L+DL +GV
Sbjct: 273 SMSQNKVWTLVDLPDGV 289



 Score = 28.5 bits (62), Expect(3) = 5e-09
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 379 KTFIARTRAFLKKEYLSKRT 320
           K F+AR  AFL++E+LSK T
Sbjct: 157 KVFVARNGAFLEREFLSKGT 176



 Score = 23.5 bits (49), Expect(3) = 5e-09
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 34  IECKWIFKKK 5
           I+CKWIF KK
Sbjct: 292 IKCKWIFMKK 301


>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] CAB80804.1 putative
           retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
 Frame = -1

Query: 249 QPTLRRFERNRR*PNH---WYGE---AFLVESHESTSYEEAITSTDTDTRLIVMKSDMDS 88
           +P +RR ER+R  P+    W  +    F++ES E TSYEEA+   D+D  L   KS+M+S
Sbjct: 408 EPEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMES 467

Query: 87  MYQKKV*SLLDLLNGVPRLSVNGYSKRNM 1
           M Q KV +L+DL +GV  +      K+ +
Sbjct: 468 MSQNKVWTLVDLPDGVKPIECKWIFKKKI 496


>KRY06569.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trichinella patagoniensis]
          Length = 618

 Score = 49.7 bits (117), Expect(3) = 1e-06
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = -1

Query: 237 RRFERNRR*PNHWYG----EAFLVESHESTSYEEAITSTDTDTRLIVMKSDMDSMYQKKV 70
           RR  R R  P  WYG    E  L++  E T+YEEA+ S D+   L  MKS+M SMY+ KV
Sbjct: 246 RRSTRVRSAPE-WYGNPVLEVMLLDHDEPTNYEEAMMSPDSAKWLEAMKSEMRSMYENKV 304

Query: 69  *SLLDL 52
            +L+DL
Sbjct: 305 WTLVDL 310



 Score = 27.7 bits (60), Expect(3) = 1e-06
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 379 KTFIARTRAFLKKEYLSKRT*CDGVHLKKP*ADEANFNTPSVETTN 242
           K F+A+  +FL+KE+LSK      V  +K   DE     P +E+++
Sbjct: 174 KIFVAKNGSFLEKEFLSKE-----VSGRKVELDEVTVPAPLLESSS 214



 Score = 21.6 bits (44), Expect(3) = 1e-06
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 34  IECKWIFKKK 5
           IE KWIFK+K
Sbjct: 317 IENKWIFKRK 326


>EMS53304.1 hypothetical protein TRIUR3_14429 [Triticum urartu]
          Length = 669

 Score = 51.6 bits (122), Expect(2) = 5e-06
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
 Frame = -1

Query: 237 RRFERNRR*PNHWYG----EAFLVESHESTSYEEAITSTDTDTRLIVMKSDMDSMYQKKV 70
           RR  R R  P  WYG    +  L++  E T+YEEA+ S D+D  L  MKS++ SMY+ KV
Sbjct: 592 RRLNRARSAPE-WYGNPVLKVMLLDHDEPTNYEEAMMSPDSDKWLEAMKSEIGSMYENKV 650

Query: 69  *SLLDL 52
            +L+DL
Sbjct: 651 WTLVDL 656



 Score = 25.8 bits (55), Expect(2) = 5e-06
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 379 KTFIARTRAFLKKEYLSKRT*CDGVHLKKP*ADEAN---FNTPSVETTN 242
           K F+A+   FL+KE+LSK      V  +K   DE +    +TP+ E  N
Sbjct: 534 KIFVAKNGTFLEKEFLSKE-----VSGRKIEVDEKSAPVMSTPTREEAN 577