BLASTX nr result
ID: Lithospermum23_contig00045167
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00045167
(317 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ALI91160.1 RpoC2, partial (chloroplast) [Borago officinalis] 205 2e-59
ADD31152.1 RNA polymerase beta'' subunit protein (chloroplast) [... 202 3e-58
ALI91183.1 RpoC2, partial (chloroplast) [Nama carnosa] 202 4e-58
ALI91163.1 RpoC2, partial (chloroplast) [Cordia sebestena] 200 1e-57
AKZ23924.1 RNA polymerase beta'' subunit (plastid) [Ellisia nyct... 198 8e-57
AII18677.1 RNA polymerase beta' subunit, partial (chloroplast) [... 195 9e-56
ALI91180.1 RpoC2, partial (chloroplast) [Merrilliodendron megaca... 195 9e-56
ALI91179.1 RpoC2, partial (chloroplast) [Mappianthus iodoides] 194 2e-55
ALI91162.1 RpoC2, partial (chloroplast) [Cassinopsis madagascari... 194 2e-55
AII18680.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18684.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18681.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18679.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18676.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18675.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18674.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18672.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18671.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18670.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
AII18669.1 RNA polymerase beta' subunit, partial (chloroplast) [... 193 4e-55
>ALI91160.1 RpoC2, partial (chloroplast) [Borago officinalis]
Length = 1366
Score = 205 bits (522), Expect = 2e-59
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = +1
Query: 1 KNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQL 180
KNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPP+LLQERDDVQL
Sbjct: 753 KNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPDLLQERDDVQL 812
Query: 181 RVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
RV+NYIL GNGKP+RGIYDTSIQLVRTCLVLSWDQETKSSSIEEA
Sbjct: 813 RVLNYILCGNGKPLRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 857
>ADD31152.1 RNA polymerase beta'' subunit protein (chloroplast) [Ehretia
acuminata]
Length = 1381
Score = 202 bits (513), Expect = 3e-58
Identities = 100/104 (96%), Positives = 103/104 (99%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPP+LLQERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPDLLQERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVLSWDQETKSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLSWDQETKSSSIEEA 855
>ALI91183.1 RpoC2, partial (chloroplast) [Nama carnosa]
Length = 1365
Score = 202 bits (513), Expect = 4e-58
Identities = 100/104 (96%), Positives = 103/104 (99%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPP+LLQERD+VQLR
Sbjct: 753 NSKESKKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPDLLQERDNVQLR 812
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVLSWDQETKSSSIEEA
Sbjct: 813 VVNYILYGNGKPIRGISDTSIQLVRTCLVLSWDQETKSSSIEEA 856
>ALI91163.1 RpoC2, partial (chloroplast) [Cordia sebestena]
Length = 1366
Score = 200 bits (509), Expect = 1e-57
Identities = 99/104 (95%), Positives = 103/104 (99%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITPSKKK+FVLVRPVVTYEITDGINLSTLFPP+LLQERD+VQLR
Sbjct: 754 NSKESKKLKNWIYVQRITPSKKKFFVLVRPVVTYEITDGINLSTLFPPDLLQERDNVQLR 813
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVLSWDQETKSSSIEEA
Sbjct: 814 VVNYILYGNGKPIRGISDTSIQLVRTCLVLSWDQETKSSSIEEA 857
>AKZ23924.1 RNA polymerase beta'' subunit (plastid) [Ellisia nyctelea]
Length = 1379
Score = 198 bits (503), Expect = 8e-57
Identities = 97/104 (93%), Positives = 102/104 (98%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITPSKKKYFVLVRPV+TYEITDGINLSTLFPP+LLQERD+V+LR
Sbjct: 750 NSKESKKLKNWIYVQRITPSKKKYFVLVRPVITYEITDGINLSTLFPPDLLQERDNVKLR 809
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVLSWDQETK SSIEEA
Sbjct: 810 VVNYILYGNGKPIRGISDTSIQLVRTCLVLSWDQETKRSSIEEA 853
>AII18677.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum molle]
Length = 1384
Score = 195 bits (495), Expect = 9e-56
Identities = 94/104 (90%), Positives = 102/104 (98%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI+DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGIFDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>ALI91180.1 RpoC2, partial (chloroplast) [Merrilliodendron megacarpum]
Length = 1366
Score = 195 bits (495), Expect = 9e-56
Identities = 95/104 (91%), Positives = 102/104 (98%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL+TLFPP+LLQERD+VQLR
Sbjct: 754 NSKESKKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLATLFPPDLLQERDNVQLR 813
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+TK+SS EEA
Sbjct: 814 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDTKNSSSEEA 857
>ALI91179.1 RpoC2, partial (chloroplast) [Mappianthus iodoides]
Length = 1366
Score = 194 bits (493), Expect = 2e-55
Identities = 95/105 (90%), Positives = 101/105 (96%)
Frame = +1
Query: 1 KNSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQL 180
KNSKES+KLKNWIYVQRITPSKKKYFVLVRPVV YEITDGINL+TLFPP+LLQERD+VQL
Sbjct: 753 KNSKESKKLKNWIYVQRITPSKKKYFVLVRPVVAYEITDGINLATLFPPDLLQERDNVQL 812
Query: 181 RVVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
RVVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ TK+SS EEA
Sbjct: 813 RVVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQNTKNSSSEEA 857
>ALI91162.1 RpoC2, partial (chloroplast) [Cassinopsis madagascariensis]
Length = 1366
Score = 194 bits (492), Expect = 2e-55
Identities = 95/104 (91%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINL+TLFPP+LLQERD+VQLR
Sbjct: 754 NSKESKKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLATLFPPDLLQERDNVQLR 813
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSS EEA
Sbjct: 814 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSSEEA 857
>AII18680.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
punctatum]
Length = 1413
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 781 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 840
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 841 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 884
>AII18684.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
triphyllum]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18681.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
sieboldii]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18679.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
plicatum]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18676.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lutescens]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18675.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lentago]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18674.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
lantanoides]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18672.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
erubescens]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18671.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
dilatatum]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18670.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
dentatum]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855
>AII18669.1 RNA polymerase beta' subunit, partial (chloroplast) [Viburnum
cylindricum]
Length = 1384
Score = 193 bits (490), Expect = 4e-55
Identities = 94/104 (90%), Positives = 101/104 (97%)
Frame = +1
Query: 4 NSKESQKLKNWIYVQRITPSKKKYFVLVRPVVTYEITDGINLSTLFPPELLQERDDVQLR 183
NSKES+KLKNWIYVQRITP+KKKYFVLVRPVVTYEITDGINL+TLFPP+LL ERD+VQLR
Sbjct: 752 NSKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEITDGINLATLFPPDLLHERDNVQLR 811
Query: 184 VVNYILYGNGKPIRGIYDTSIQLVRTCLVLSWDQETKSSSIEEA 315
VVNYILYGNGKPIRGI DTSIQLVRTCLVL+WDQ+ KSSSIEEA
Sbjct: 812 VVNYILYGNGKPIRGISDTSIQLVRTCLVLNWDQDKKSSSIEEA 855