BLASTX nr result
ID: Lithospermum23_contig00045002
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00045002
(442 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN83352.1 hypothetical protein VITISV_022160 [Vitis vinifera] 77 2e-13
XP_016444583.1 PREDICTED: uncharacterized protein LOC107769838 [... 75 4e-13
KYP38376.1 Retrovirus-related Pol polyprotein from transposon TN... 71 3e-12
CAN70473.1 hypothetical protein VITISV_037490 [Vitis vinifera] 73 4e-12
XP_018810017.1 PREDICTED: uncharacterized protein LOC108982976 [... 71 1e-11
CAN62863.1 hypothetical protein VITISV_030334 [Vitis vinifera] 71 2e-11
JAU78288.1 putative mitochondrial protein, partial [Noccaea caer... 67 1e-10
OMO55025.1 Integrase, catalytic core [Corchorus capsularis] 68 2e-10
ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass... 68 2e-10
ABA95367.1 retrotransposon protein, putative, Ty1-copia subclass... 67 3e-10
BAB10876.1 polyprotein [Arabidopsis thaliana] 67 4e-10
CAN69706.1 hypothetical protein VITISV_037595 [Vitis vinifera] 66 6e-10
XP_016742381.1 PREDICTED: uncharacterized protein LOC107951755 i... 65 9e-10
OMO75820.1 Integrase, catalytic core [Corchorus capsularis] 66 1e-09
JAU21749.1 putative mitochondrial protein, partial [Noccaea caer... 60 3e-09
KYP46802.1 Retrovirus-related Pol polyprotein from transposon TN... 64 4e-09
JAT59554.1 Retrovirus-related Pol polyprotein from transposon TN... 64 4e-09
KFK45117.1 hypothetical protein AALP_AA1G346500, partial [Arabis... 64 5e-09
AAF99727.1 F17L21.7 [Arabidopsis thaliana] 64 5e-09
OMO68753.1 Integrase, catalytic core [Corchorus capsularis] 63 8e-09
>CAN83352.1 hypothetical protein VITISV_022160 [Vitis vinifera]
Length = 1087
Score = 76.6 bits (187), Expect = 2e-13
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Frame = -2
Query: 402 TSLITSPASMNDPS*YVGSGASNHLTYDLNNLSFTTQYEG------------HAAPYCAM 259
T+ + ++M + + S AS+++T DL+NLS ++Y+G H
Sbjct: 275 TANSATTSTMKEQKWLLDSAASHNITGDLHNLSIHSEYDGIDEVVLGDGSEVHVRTXFTF 334
Query: 258 LLDSLFKTLVIPFFPLSPQSSLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLC 82
+ L + + LD WH+ LGHP+ PI+K+ V+ LP + + +++C C
Sbjct: 335 FRNPLVGNFSQKVANVHERXXLDGWHKRLGHPSYPIVKNLVSXFSLPTTTNXXTMLCRSC 394
Query: 81 QMGKSHKLPFQESTYVSTGPLDLVFTE 1
+ KSH+ PF+ ++ STGPL++++T+
Sbjct: 395 SINKSHQQPFRTTSLSSTGPLEIIYTD 421
>XP_016444583.1 PREDICTED: uncharacterized protein LOC107769838 [Nicotiana tabacum]
Length = 376
Score = 75.1 bits (183), Expect = 4e-13
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = -2
Query: 411 STKTSLITSPASMNDPS*YVGSGASNHLTYDLNNLSFT-----TQYEGHAAPYCAMLLDS 247
S TS + S + S + +G ++HLT DL+NL F TQ Y +L S
Sbjct: 215 SRPTSNLASSPNPPIQSWLMDNGITHHLTADLDNLGFDNEKNPTQESSSGDLYSLPVLHS 274
Query: 246 LFKTLVIPFFPLSPQSSLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLCQMGK 70
P S +SL +WH L H + P + HA+ S L S + +C+ C + K
Sbjct: 275 SS--------PASYAASLGVWHARLDHASYPTVHHALPSNVLASSSNEYPSLCSTCDVSK 326
Query: 69 SHKLPFQESTYVSTGPLDLVFTE 1
SHKLPF+ES++ TGPLDLV ++
Sbjct: 327 SHKLPFKESSFKDTGPLDLVCSD 349
>KYP38376.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 201
Score = 70.9 bits (172), Expect = 3e-12
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -2
Query: 210 SPQSSLDIWHQ*LGHPAP-IIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYV 34
S SS +WH LGHP+P I+ + S +P++K+S S C C MGKSH+LPF +S V
Sbjct: 31 SAHSSFQLWHSRLGHPSPRIVNTVLKSCNMPIAKNSDSFFCQSCCMGKSHQLPFIDSKTV 90
Query: 33 STGPLDLVFTE 1
T PL+L++++
Sbjct: 91 YTSPLELIYSD 101
>CAN70473.1 hypothetical protein VITISV_037490 [Vitis vinifera]
Length = 786
Score = 72.8 bits (177), Expect = 4e-12
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Frame = -2
Query: 366 PS*YVGSGASNHLTYDLNNLSFTTQYEGH----AAPYCAMLLDSL--------FKTLVIP 223
P + SG S+H+T DL+NLS T Y G ++L+ F+
Sbjct: 86 PQWLLDSGVSHHVTTDLSNLSLHTPYTGSDDIMIGDGSSLLITHTGTSHGGNPFEGSHER 145
Query: 222 FFPLSPQSSLDI----WHQ*LGHPA-PIIKHAVNSLRLPVSKSSAS-VVCTLCQMGKSHK 61
+ PL SS+ WH LGHP PI+KH V+ +L +S S S +C +C K+HK
Sbjct: 146 WAPLVAFSSVKTSSFEWHHRLGHPVFPILKHIVSHYQLDLSSSLISDFLCNVCHYNKNHK 205
Query: 60 LPFQESTYVSTGPLDLVFTE 1
LPF ST VS+ PL+++F++
Sbjct: 206 LPFSTSTVVSSQPLEIIFSD 225
>XP_018810017.1 PREDICTED: uncharacterized protein LOC108982976 [Juglans regia]
Length = 479
Score = 71.2 bits (173), Expect = 1e-11
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -2
Query: 228 IPFFPLSPQSSLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPF 52
+P LS ++ L WH LGHP+ I+++ ++ LP++ + VC CQ GKSH+LPF
Sbjct: 402 LPQALLSNRAPLTTWHSRLGHPSMKIVRNIISRFSLPITSNKIDSVCAACQQGKSHQLPF 461
Query: 51 QESTYVSTGPLDLVFTE 1
S VS GPLDL+F++
Sbjct: 462 VPSETVSKGPLDLIFSD 478
>CAN62863.1 hypothetical protein VITISV_030334 [Vitis vinifera]
Length = 1442
Score = 70.9 bits (172), Expect = 2e-11
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Frame = -2
Query: 402 TSLITSPASMNDPS*YVGSGASNHLTYDLNNLSFTTQYEG---------------HAAPY 268
T+ + ++M + + S AS+++T DL NLS ++Y+G H
Sbjct: 422 TANSATTSTMKEQKWLLDSAASHNITGDLQNLSIHSEYDGTDEVVLGDGSGLAVSHEPIT 481
Query: 267 CAMLLDS-------LFKTLVIPFFP-----LSPQSSLDIWHQ*LGHPA-PIIKHAVNSLR 127
A+LL +F ++ F + + LD WH+ LGHP+ PI+K+ V+
Sbjct: 482 GAILLRGSCENGIYIFSESLVGNFSQKVANVHERMLLDGWHKRLGHPSYPIVKNLVSIFS 541
Query: 126 LPVSKSSASVVCTLCQMGKSHKLPFQESTYVSTGPLDLVFTE 1
LP + + +++C C + KSH+ PF+ ++ STGPL +++T+
Sbjct: 542 LPTTTNKITMLCRSCSINKSHQQPFRTTSLSSTGPLKIIYTD 583
>JAU78288.1 putative mitochondrial protein, partial [Noccaea caerulescens]
Length = 275
Score = 67.4 bits (163), Expect = 1e-10
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Frame = -2
Query: 339 SNHLTYDLNNLSFTTQYEGHAAPY-CAMLLDSLFK-TLVIP-----FFPLSPQSSLDIWH 181
SN ++ + SF + P C D L++ + +P F S +++L WH
Sbjct: 144 SNRVSVEFFPASFQVKDLKSGVPLLCGKTRDELYEWPMTVPQVNAAFLSPSSKTTLASWH 203
Query: 180 Q*LGHPAP-IIKHAVNSLRLPVSKSSASVV-CTLCQMGKSHKLPFQESTYVSTGPLDLVF 7
LGHP+P I+ + ++S LPVS S ++ CT C + KSHKLPF +ST VST PL ++
Sbjct: 204 SRLGHPSPPILNNLISSFSLPVSFPSQKLLSCTDCLINKSHKLPFSKSTIVSTKPLQYLY 263
Query: 6 TE 1
++
Sbjct: 264 SD 265
>OMO55025.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1488
Score = 68.2 bits (165), Expect = 2e-10
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = -2
Query: 354 VGSGASNHLTYDLNNLSFTTQYEGHAAPYCAMLLDSLFKTLVIPFFPLSPQSSLDIWHQ* 175
V SGA++H+T + NL + +YEG +LL ++ + WHQ
Sbjct: 559 VDSGANHHVTNRIQNLQYAQEYEGTDD----LLLGD----------GTGVKTDIQTWHQR 604
Query: 174 LGHP-APIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYVSTGPLDLVFTE 1
LGHP ++ + S LP S C C KSH+LPF S+ VS GPLD+ +T+
Sbjct: 605 LGHPNISMLNSVLQSFSLPCSSKKNFTSCNACLCNKSHRLPFSISSIVSRGPLDVTYTD 663
>ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 67.8 bits (164), Expect = 2e-10
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -2
Query: 198 SLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYVSTGP 22
SLD WH LGHP+ +K VN LP S S+ VC CQ KSH+LPF S+ VS P
Sbjct: 449 SLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHP 508
Query: 21 LDLVFTE 1
L+LVF++
Sbjct: 509 LELVFSD 515
>ABA95367.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 67.4 bits (163), Expect = 3e-10
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 WHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYVSTGPLDLV 10
WH L HP PI+ VN +LP KS + VC CQ KSH+LP+ ST VST PL+LV
Sbjct: 422 WHSRLSHPTTPIVSRVVNQNKLPCQKSHSESVCDACQKAKSHQLPYSRSTSVSTRPLELV 481
Query: 9 FTE 1
+++
Sbjct: 482 YSD 484
>BAB10876.1 polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 67.0 bits (162), Expect = 4e-10
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = -2
Query: 240 KTLVIPFFPLSPQSSLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKS-SASVVCTLCQMGKS 67
K++ I SP++ L WHQ LGHPA PI+K V+ LP+S + + C+ C + KS
Sbjct: 432 KSITILTASPSPKTDLSSWHQRLGHPALPILKDVVSHFHLPLSNTIPKQLPCSDCSINKS 491
Query: 66 HKLPFQESTYVSTGPLDLVFTE 1
HKLPF +T VS+ PL+ ++T+
Sbjct: 492 HKLPFFTNTIVSSQPLEYLYTD 513
>CAN69706.1 hypothetical protein VITISV_037595 [Vitis vinifera]
Length = 431
Score = 66.2 bits (160), Expect = 6e-10
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 QSSLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYVST 28
++SLD WH+ LGHP+ PI+K+ V++ LP + + +++C C + KSH+ PF ++ S
Sbjct: 306 RTSLDGWHKRLGHPSYPIVKNLVSTFSLPTTTNKMTMLCRSCSINKSHQQPFHTTSLSSX 365
Query: 27 GPLDLVFTE 1
GPL++++T+
Sbjct: 366 GPLEIIYTD 374
>XP_016742381.1 PREDICTED: uncharacterized protein LOC107951755 isoform X2
[Gossypium hirsutum]
Length = 239
Score = 64.7 bits (156), Expect = 9e-10
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Frame = -2
Query: 411 STKTSLITSPASMNDPS*YVGSGASNHLTYDLNNLSFTTQYEGHAA----------PYCA 262
ST++S + P+++ D + Y SGA+ H+T D N S A P C+
Sbjct: 86 STRSSGLAIPSTVVDLAWYSDSGATAHMTNDSVNFSMLACTMEKFAKDNGVFFEFYPNCS 145
Query: 261 MLLDSLFKTLVIPFFPLSPQSS---LDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVV 94
+ D ++ L Q S D WH+ LGHP+ ++ +NS + +S +
Sbjct: 146 YVKDLKTHQTLLCEKSLQQQGSNVKFDRWHRRLGHPSCDVVCSILNSCNIRISIHKNYTL 205
Query: 93 CTLCQMGKSHKLPFQESTYVSTGPLDLV 10
C C++GK HKLPF V T PL LV
Sbjct: 206 CNTCELGKGHKLPFSSFDSVYTAPLKLV 233
>OMO75820.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1430
Score = 65.9 bits (159), Expect = 1e-09
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -2
Query: 204 QSSLDIWHQ*LGHP-APIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYVST 28
+SSL+ WHQ LGHP + +++ + S LP S C C KSH+LPF S+ VS
Sbjct: 643 KSSLETWHQRLGHPNSHVLQSVLKSFSLPCSSFKQFSSCNACYCNKSHRLPFSSSSIVSR 702
Query: 27 GPLDLVFTE 1
GPLD+++T+
Sbjct: 703 GPLDVIYTD 711
>JAU21749.1 putative mitochondrial protein, partial [Noccaea caerulescens]
Length = 100
Score = 60.5 bits (145), Expect = 3e-09
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -2
Query: 219 FPLSPQSSLDIWHQ*LGHPA-PIIKHAVNSLRLPVSKSSASV-VCTLCQMGKSHKLPFQE 46
F + ++SL WH LGHPA ++ ++ LPVS + +C+ C + K HKLPF
Sbjct: 5 FASTVKTSLTDWHSRLGHPAIAVLNKTISQFNLPVSSNVLMAQLCSACSINKMHKLPFSS 64
Query: 45 STYVSTGPLDLVFTE 1
ST S PLD+VF++
Sbjct: 65 STLQSVRPLDIVFSD 79
>KYP46802.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 787
Score = 63.9 bits (154), Expect = 4e-09
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = -2
Query: 210 SPQSSLDIWHQ*LGHPAP-IIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYV 34
S S +WH LGHP+P I+K A+ +P S S +C C MGK+H+LPF +ST
Sbjct: 489 SNHSLFQLWHSRLGHPSPRIVKLALKHCNIPSSHFPDSFLCDSCCMGKAHQLPFVQSTTE 548
Query: 33 STGPLDLVFTE 1
PL+LVFT+
Sbjct: 549 YKSPLELVFTD 559
>JAT59554.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 977
Score = 63.9 bits (154), Expect = 4e-09
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -2
Query: 186 WHQ*LGHPA-PIIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQESTYVSTGPLDLV 10
WH LGHPA ++ ++ LPVS SS S VC+ C KSHKLPF S V++ PLDL+
Sbjct: 27 WHARLGHPALRTVQSIISKYGLPVSPSSPSSVCSACMQAKSHKLPFASSPPVASAPLDLI 86
Query: 9 FTE 1
+++
Sbjct: 87 YSD 89
>KFK45117.1 hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
Length = 1203
Score = 63.9 bits (154), Expect = 5e-09
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = -2
Query: 237 TLVIPFFPLSPQSSLDIWHQ*LGHPAPIIKH-AVNSLRLPVSKSSASVVCTLCQMGKSHK 61
TL F +P+ S WH LGHP+ I H V+ LP S+S + VC+ C + K+HK
Sbjct: 456 TLTSFFASTTPKLSTTDWHHRLGHPSTTILHNIVSKFSLPCSRS-VNNVCSDCAINKTHK 514
Query: 60 LPFQESTYVSTGPLDLVFTE 1
LPF +++ VST PL+ VFT+
Sbjct: 515 LPFSQTSIVSTYPLEYVFTD 534
>AAF99727.1 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 63.9 bits (154), Expect = 5e-09
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = -2
Query: 210 SPQSSLDIWHQ*LGHPAP-IIKHAVNSLRLPVSKSSAS-VVCTLCQMGKSHKLPFQESTY 37
+P+++L WH LGHP+P ++K V+ LPVS SS C+ C + KSHKLPF +T
Sbjct: 552 TPKTTLPSWHSRLGHPSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTI 611
Query: 36 VSTGPLDLVFTE 1
+S PL+ V+++
Sbjct: 612 ISYTPLEYVYSD 623
>OMO68753.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1059
Score = 63.2 bits (152), Expect = 8e-09
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = -2
Query: 390 TSPASMNDPS*YVGSGASNHLTYDLNNLSFTTQYEGHAAPYCAMLLDSLF--KTLVIPFF 217
T A++N P S A + DL+ Q Y DSL KTL +
Sbjct: 251 TGSATLNTPH---NSFALTDILVDLSTRKPLVQGLNKDGVYEFPPADSLLEGKTLAL--- 304
Query: 216 PLSPQSSLDIWHQ*LGHPAP-IIKHAVNSLRLPVSKSSASVVCTLCQMGKSHKLPFQEST 40
+ + + IWHQ LGHP+ ++ VN LP K+SA+ +CT C K HKLPF
Sbjct: 305 -VGTRQNKRIWHQRLGHPSSQTLQFLVNHFDLPCFKNSATELCTSCACNKIHKLPFDLLN 363
Query: 39 YVSTGPLDLVFTE 1
+V+ PL+++FT+
Sbjct: 364 FVTKAPLEILFTD 376