BLASTX nr result
ID: Lithospermum23_contig00044857
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00044857
(326 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP53032.1 Retrovirus-related Pol polyprotein from transposon TN... 51 1e-07
KYP42748.1 Retrovirus-related Pol polyprotein from transposon TN... 49 5e-07
KYP67664.1 Retrovirus-related Pol polyprotein from transposon TN... 49 5e-07
KYP38095.1 Retrovirus-related Pol polyprotein from transposon TN... 49 5e-07
KYP36645.1 Retrovirus-related Pol polyprotein from transposon TN... 49 5e-07
KZV22485.1 hypothetical protein F511_19705 [Dorcoceras hygrometr... 48 1e-06
AFB73912.1 polyprotein [Citrus sinensis] 55 2e-06
KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angul... 49 4e-06
AFB73911.1 polyprotein [Citrus sinensis] 53 8e-06
>KYP53032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSR+M +PG+EH S+VK+ L +KG + E FV+RGYVDSD
Sbjct: 1112 AVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFVVRGYVDSD 1159
Score = 31.6 bits (70), Expect(2) = 1e-07
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVFTLA
Sbjct: 1162 GDLDKRKSTTGYVFTLA 1178
>KYP42748.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSR+M +PG+EH S+VK+ L +KG + E F +RGYVDSD
Sbjct: 1112 AVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSD 1159
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVFTLA
Sbjct: 1162 GDLDKRKSTTGYVFTLA 1178
>KYP67664.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSR+M +PG+EH S+VK+ L +KG + E F +RGYVDSD
Sbjct: 1063 AVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSD 1110
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVFTLA
Sbjct: 1113 GDLDKRKSTTGYVFTLA 1129
>KYP38095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSR+M +PG+EH S+VK+ L +KG + E F +RGYVDSD
Sbjct: 1063 AVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSD 1110
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVFTLA
Sbjct: 1113 GDLDKRKSTTGYVFTLA 1129
>KYP36645.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSR+M +PG+EH S+VK+ L +KG + E F +RGYVDSD
Sbjct: 1063 AVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSEFFVRGYVDSD 1110
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVFTLA
Sbjct: 1113 GDLDKRKSTTGYVFTLA 1129
>KZV22485.1 hypothetical protein F511_19705 [Dorcoceras hygrometricum]
Length = 425
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSRYM NPG+EH S VK+ L +KG LRGYVDSD
Sbjct: 306 AVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGSYLTLRGYVDSD 353
Score = 32.0 bits (71), Expect(2) = 1e-06
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVFTLA
Sbjct: 356 GDPDKRKSTTGYVFTLA 372
>AFB73912.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 55.1 bits (131), Expect = 2e-06
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +1
Query: 91 EKVLRYIKRTTNVALCYGGSNFCVKRIC*F*RVIKIKANTPPDMCSLLLWSSFTGYVFTL 270
+++LRYI+ T+NVALCYGGS F V+ + ++ D+ S TGYVFTL
Sbjct: 1133 KRILRYIRGTSNVALCYGGSEFTVRGY--------VDSDFAGDLDKR---KSTTGYVFTL 1181
Query: 271 CCGVAVS*ISKLQFVVVL 324
G AVS +SKLQ VV L
Sbjct: 1182 A-GAAVSWVSKLQTVVAL 1198
>KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 48.5 bits (114), Expect(2) = 4e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +2
Query: 41 AVSRYMTNPGQEH*SMVKKSLDTLKGPQMLHYVMEDQTFVLRGYVDSD 184
AVSR+M NPG+EH + VK+ L +KG + F++RGYVDSD
Sbjct: 32 AVSRFMANPGEEHWNAVKRVLRYIKGTSDVALCFGGSKFIVRGYVDSD 79
Score = 29.3 bits (64), Expect(2) = 4e-06
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 186 GDQDKSKHTTGYVFTLA 236
GD DK K TTGYVF LA
Sbjct: 82 GDLDKRKSTTGYVFKLA 98
>AFB73911.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 53.1 bits (126), Expect = 8e-06
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +1
Query: 91 EKVLRYIKRTTNVALCYGGSNFCVKRIC*F*RVIKIKANTPPDMCSLLLWSSFTGYVFTL 270
+++LRYI+ T++VALCYGGS F V+ + ++ D+ S TGYVFTL
Sbjct: 1133 KRILRYIRGTSDVALCYGGSEFTVRGY--------VDSDFAGDLDKR---KSTTGYVFTL 1181
Query: 271 CCGVAVS*ISKLQFVVVL 324
G AVS +SKLQ VV L
Sbjct: 1182 A-GAAVSWVSKLQTVVAL 1198