BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00044192
         (568 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN...   247   6e-77
KYP60297.1 Retrovirus-related Pol polyprotein from transposon TN...   234   6e-76
BAA11674.1 unnamed protein product [Nicotiana tabacum]                254   4e-75
KYP59970.1 Retrovirus-related Pol polyprotein from transposon TN...   236   1e-73
KYP54199.1 Retrovirus-related Pol polyprotein from transposon TN...   230   3e-73
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN...   249   3e-73
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN...   249   3e-73
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro...   246   2e-72
GAU23463.1 hypothetical protein TSUD_331610 [Trifolium subterran...   239   1e-71
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...   244   1e-71
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN...   242   7e-71
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]        242   1e-70
KYP50580.1 Retrovirus-related Pol polyprotein from transposon TN...   230   1e-70
AAW22873.1 putative polyprotein [Solanum lycopersicum]                233   7e-70
CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]        238   1e-69
AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]          238   3e-69
CAN67337.1 hypothetical protein VITISV_004415 [Vitis vinifera]        219   8e-69
KYP42640.1 Retrovirus-related Pol polyprotein from transposon TN...   223   4e-68
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]             234   5e-68
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN...   232   3e-67

>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 501

 Score =  247 bits (631), Expect = 6e-77
 Identities = 116/186 (62%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           +FNMD  K VN PL  HF++S++ SP S+ E   M+KIPY+S +GSLMYAMICTRPDIAY
Sbjct: 243 QFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAY 302

Query: 386 AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
           AVG+ SRF +NPG +HW  ++WILRYL+GT K C+C+G     L  YTD DLAGD+ + +
Sbjct: 303 AVGVVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRK 362

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           STSGYL T+ GGA+SWQSK QKCVALSTTEAEYIA TE  KE+LW+K    ELGV Q+RY
Sbjct: 363 STSGYLTTFVGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVDQERY 422

Query: 29  TVQCDS 12
            ++CD+
Sbjct: 423 VLKCDN 428


>KYP60297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 183

 Score =  234 bits (597), Expect = 6e-76
 Identities = 104/183 (56%), Positives = 146/183 (79%), Gaps = 1/183 (0%)
 Frame = -3

Query: 557 MDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAYAVG 378
           M+++K V+ PL THFK+S + SP ++ E+L M+++PYAS +GSLMYAM+CTRPDIAYA+G
Sbjct: 1   MENAKAVSTPLATHFKLSVKQSPSNEAEKLEMERVPYASTVGSLMYAMVCTRPDIAYAIG 60

Query: 377 -LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMRSTS 201
            +SRF SNPG++HW  ++WI+RYL GT+ M +C+G     L+ Y+D D+AGDV + +ST 
Sbjct: 61  TVSRFLSNPGREHWNAVKWIMRYLHGTVDMKLCFGGDKPTLVGYSDSDMAGDVDSRKSTL 120

Query: 200 GYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRYTVQ 21
           GYL+ +AGGA++WQS+ Q+CVALSTTE E+IA+TE  KE+LWLK+F +ELG VQ+ Y + 
Sbjct: 121 GYLIKFAGGAVAWQSRLQRCVALSTTEVEFIAITEACKELLWLKKFLQELGFVQENYPLF 180

Query: 20  CDS 12
            DS
Sbjct: 181 VDS 183


>BAA11674.1 unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  254 bits (649), Expect = 4e-75
 Identities = 114/186 (61%), Positives = 151/186 (81%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RFNM+ +K V+CPL  HF++ST+ SP + +E+  M++IPYASA+GSLMYAM+CTRPDIA+
Sbjct: 1073 RFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAH 1132

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF SNPGK+HW+ ++WILRYL+GT K+C+C+G     L+ YTD D+AGDV + +
Sbjct: 1133 AVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRK 1192

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGYL+ ++GGA+SWQSK QKCVALSTTEAE+IA TE  KE++W+K+F  ELG  Q  Y
Sbjct: 1193 STSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGY 1252

Query: 29   TVQCDS 12
             + CDS
Sbjct: 1253 QLFCDS 1258


>KYP59970.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 412

 Score =  236 bits (602), Expect = 1e-73
 Identities = 107/186 (57%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           RF ++++K V+ P  THFK+S + SP +K E+L M+++PYASA+GSLMYAM+CTRP IA+
Sbjct: 152 RFQIENAKAVSTPFATHFKLSVKQSPSNKAEKLDMERVPYASAVGSLMYAMVCTRPYIAH 211

Query: 386 AVG-LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
           AVG +SRF SNPG++HW  ++WILRYL GT+ M +C+G     L+ Y+D D+AGDV + +
Sbjct: 212 AVGTVSRFLSNPGREHWNSVKWILRYLHGTVDMKLCFGGDKPTLVGYSDSDMAGDVDSRK 271

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           STSGYL+ +AGGA++WQS+ Q+CV LSTTEAE+IA+TE  KE+LWLK+F +ELG VQ +Y
Sbjct: 272 STSGYLIKFAGGAVAWQSRLQRCVTLSTTEAEFIAITEACKELLWLKKFLQELGFVQDKY 331

Query: 29  TVQCDS 12
            +  DS
Sbjct: 332 PLFVDS 337


>KYP54199.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 256

 Score =  230 bits (586), Expect = 3e-73
 Identities = 103/183 (56%), Positives = 147/183 (80%), Gaps = 1/183 (0%)
 Frame = -3

Query: 557 MDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAYAVG 378
           M+++K V+ PL THFK+S + SP +++E+L M+++PYASA+GSLMY M+CTRPDIA+AVG
Sbjct: 1   MENAKAVSTPLATHFKLSVKQSPSNEDEKLDMERVPYASAVGSLMYEMVCTRPDIAHAVG 60

Query: 377 -LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMRSTS 201
            ++RF SNPG++HW  ++WILRYL GT+ M +C+      L+ Y+D D+AGDV + +STS
Sbjct: 61  TVNRFLSNPGREHWNAVKWILRYLHGTVDMKLCFRGDKPTLVGYSDSDMAGDVDSRKSTS 120

Query: 200 GYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRYTVQ 21
           GYL+ +AGGA++WQS+ QKCVALST E ++IA+TE  KE+LWLK+F +ELG VQ++Y + 
Sbjct: 121 GYLIKFAGGAVAWQSRLQKCVALSTIEVKFIAITEACKELLWLKKFLQELGFVQEKYLLF 180

Query: 20  CDS 12
            DS
Sbjct: 181 VDS 183


>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  249 bits (635), Expect = 3e-73
 Identities = 117/186 (62%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            +FNMD  K VN PL  HF++S++ SP S+ E   M+KIPY+S +GSLMYAMICTRPDIAY
Sbjct: 1047 QFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAY 1106

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF ++PG +HW  ++WILRYL+GT K C+C+G     L  YTD DLAGD+ + +
Sbjct: 1107 AVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRK 1166

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGYL T+AGGA+SWQSK QKCVALSTTEAEYIA TE  KE+LW+K    ELGV Q+RY
Sbjct: 1167 STSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVEQERY 1226

Query: 29   TVQCDS 12
             V+CD+
Sbjct: 1227 VVKCDN 1232


>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  249 bits (635), Expect = 3e-73
 Identities = 117/186 (62%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            +FNMD  K VN PL  HF++S++ SP S+ E   M+KIPY+S +GSLMYAMICTRPDIAY
Sbjct: 1047 QFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAY 1106

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF ++PG +HW  ++WILRYL+GT K C+C+G     L  YTD DLAGD+ + +
Sbjct: 1107 AVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRK 1166

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGYL T+AGGA+SWQSK QKCVALSTTEAEYIA TE  KE+LW+K    ELGV Q+RY
Sbjct: 1167 STSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVEQERY 1226

Query: 29   TVQCDS 12
             V+CD+
Sbjct: 1227 VVKCDN 1232


>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  246 bits (628), Expect = 2e-72
 Identities = 109/186 (58%), Positives = 150/186 (80%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            +F+MD +K VN P   HF++S + SP +++E+  MQKIPY+SA+GSLMYAM+CTRPD+AY
Sbjct: 926  KFSMDKAKAVNTPFAMHFRLSVKHSPSTEKEKEEMQKIPYSSAVGSLMYAMVCTRPDLAY 985

Query: 386  AVG-LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG +SRF SN G++HW  ++WI+RYL+GT  M +C+G+     + YTD D+AGD+ + R
Sbjct: 986  AVGTVSRFLSNLGREHWNAVKWIMRYLRGTSNMKLCFGNEKPVTVGYTDSDMAGDIDSRR 1045

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGYL+TYAGGA++WQS+QQKCVALSTTE+E+IA TE  KE+LW+K+F +ELG  Q++Y
Sbjct: 1046 STSGYLITYAGGAVAWQSRQQKCVALSTTESEFIAATEACKEMLWMKKFVQELGFTQEKY 1105

Query: 29   TVQCDS 12
             + CDS
Sbjct: 1106 VLYCDS 1111


>GAU23463.1 hypothetical protein TSUD_331610 [Trifolium subterraneum]
          Length = 720

 Score =  239 bits (609), Expect = 1e-71
 Identities = 108/186 (58%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           RF M++SK V+ P  THFK+S++ SP S++E L M+++PYASA+GSLMYAM+CTRPDI +
Sbjct: 38  RFQMENSKAVSTPHATHFKLSSKQSPSSEDETLDMKRVPYASAVGSLMYAMVCTRPDITH 97

Query: 386 AVG-LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
           AVG +SRF SNPG++HW  ++W+LRYL+GT  M +C+G     L  Y+D D+AGD+ + +
Sbjct: 98  AVGTVSRFLSNPGREHWNAVKWVLRYLRGTTCMRLCFGGDKPTLEGYSDSDMAGDIDSRK 157

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           STSGY++ +AGGA++WQS+ QKCVALSTTEAE+IA+TE  KE+LWLK+F +ELG VQ +Y
Sbjct: 158 STSGYMIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGFVQYKY 217

Query: 29  TVQCDS 12
            +  DS
Sbjct: 218 VLFVDS 223


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease CAA32025.1 unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  244 bits (624), Expect = 1e-71
 Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RFNM ++K V+ PL  H K+S ++ P + EE+  M K+PY+SA+GSLMYAM+CTRPDIA+
Sbjct: 1072 RFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAH 1131

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF  NPGK+HWE ++WILRYL+GT   C+C+G +   L  YTD D+AGD+   +
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRK 1191

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            S++GYL T++GGAISWQSK QKCVALSTTEAEYIA TE  KE++WLKRF +ELG+ QK Y
Sbjct: 1192 SSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEY 1251

Query: 29   TVQCDS 12
             V CDS
Sbjct: 1252 VVYCDS 1257


>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  242 bits (618), Expect = 7e-71
 Identities = 113/186 (60%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RFNM ++K V+ PL  H K+S +  P ++E++  M K+PY+SA+GSLMYAM+CTRPDIAY
Sbjct: 1057 RFNMHNAKSVHVPLPGHLKLSKKQCPVNEEKE-EMSKVPYSSAVGSLMYAMVCTRPDIAY 1115

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF SNPGK+HW  ++WILRYLKGT K C+C+G+    L  Y+D D+AGDV + +
Sbjct: 1116 AVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRK 1175

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGYL+T+AGGAISWQS+ QKC+ALSTTEAE+IA+TE  KE+LW+K+F +ELG  Q+ Y
Sbjct: 1176 STSGYLITFAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQESY 1235

Query: 29   TVQCDS 12
             + CDS
Sbjct: 1236 VLYCDS 1241


>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  242 bits (617), Expect = 1e-70
 Identities = 114/186 (61%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RFNM   K V+ PL +HFK+S+  SP + +E+  M+++PYASAIGSLMYAM+CTRPDIAY
Sbjct: 1043 RFNMSKFKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAY 1102

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF SNPG+ HWE ++WI+RYL+GT K+ + +GS    L+ YTD D+AGDV   +
Sbjct: 1103 AVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRK 1162

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGYL+T++GGA+SWQS+ QKCVALSTTEAEYIA  E  KE+LW+K F +ELG  Q+RY
Sbjct: 1163 STSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFKQQRY 1222

Query: 29   TVQCDS 12
             V CD+
Sbjct: 1223 VVYCDN 1228


>KYP50580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 478

 Score =  230 bits (587), Expect = 1e-70
 Identities = 104/186 (55%), Positives = 146/186 (78%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           RF+M++ K V+ PL  HFK+S +  P ++ E++ M ++PYA A+GSLMYAM+CTRPDIA+
Sbjct: 269 RFHMENVKAVSTPLAAHFKLSVKQCPSNEVEKINMSRVPYAYAVGSLMYAMVCTRPDIAH 328

Query: 386 AVG-LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
           AVG +SRF SNPG++HW  ++WILRYL+GT  + + +G     L+ Y+D D+AGD+ + +
Sbjct: 329 AVGTVSRFLSNPGREHWNAVKWILRYLRGTSGLKLYFGGDKPTLVGYSDSDMAGDIDSRK 388

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           STSGYLV +AGG ++WQS+ QKCVALSTTEAE+IA+TE  KE+LW+K+F +ELG VQ +Y
Sbjct: 389 STSGYLVKFAGGVVAWQSRLQKCVALSTTEAEFIALTEACKELLWVKKFLQELGFVQDKY 448

Query: 29  TVQCDS 12
            + CDS
Sbjct: 449 LLYCDS 454


>AAW22873.1 putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  233 bits (595), Expect = 7e-70
 Identities = 111/186 (59%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           RFNM ++K VN PL  HFK+S    P +++E+ +M  IPY+S +GSLMYAM+CTRPDIA+
Sbjct: 432 RFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIAH 491

Query: 386 AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
           AVGL SR+ +NP K HWE ++WILRYL+GT  + +C+G     L  +TD D+AGD+   +
Sbjct: 492 AVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAGDLDNRK 551

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           STSGYL  +A GAISWQSK QKCVALSTTE EYIA  E SKE+LWLKRF +ELG+ Q  Y
Sbjct: 552 STSGYLFKFARGAISWQSKLQKCVALSTTEVEYIAAVEASKEMLWLKRFLQELGLKQSEY 611

Query: 29  TVQCDS 12
            V CDS
Sbjct: 612 VVFCDS 617


>CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  238 bits (608), Expect = 1e-69
 Identities = 111/186 (59%), Positives = 146/186 (78%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RFNM  +K V+ PL +HFK+S+  SP + +E+  M+++PYASA+GSLMYAM+CTRPDIAY
Sbjct: 924  RFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAY 983

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            A+G+ SRF SNPG+ HWE ++WI+RYL+GT K+ + +GS    L+ YTD D+AGDV   R
Sbjct: 984  AIGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRR 1043

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
             TSGYL+T++GGA+SWQS+ QKCVALSTTEA+YIA  E  KE+LW K F +ELG  Q+RY
Sbjct: 1044 XTSGYLMTFSGGAVSWQSRLQKCVALSTTEAKYIATAEACKELLWXKCFMQELGFKQQRY 1103

Query: 29   TVQCDS 12
             V CD+
Sbjct: 1104 XVYCDN 1109


>AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  238 bits (606), Expect = 3e-69
 Identities = 108/186 (58%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RF M+++K V+ PL THFK+ST+ SP  + E+  MQ+IPYASA+GSLMYAM+CTRPDIA+
Sbjct: 1016 RFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAH 1075

Query: 386  AVG-LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
             VG +SRF SNPG++HW  ++WILRYL+GT  + +C+G     L+ YTD D+ GD+ + R
Sbjct: 1076 VVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRR 1135

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGY++ +AGGA++WQS+ QKCVALSTTEAE+IA+TE  KE+LW+K+  +EL  VQ +Y
Sbjct: 1136 STSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKLLQELSFVQDKY 1195

Query: 29   TVQCDS 12
             + CDS
Sbjct: 1196 LLFCDS 1201


>CAN67337.1 hypothetical protein VITISV_004415 [Vitis vinifera]
          Length = 281

 Score =  219 bits (559), Expect = 8e-69
 Identities = 105/186 (56%), Positives = 136/186 (73%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           RFNM+ +K V+ PLG+HFK+S E SP ++EE+  M K+PYASAIGSLMYAM+CTRPDIA+
Sbjct: 26  RFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAH 85

Query: 386 AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
           AVG+ SRF S PGK+HWE ++WILRYLKG+L  C+C+   + +L  Y D D AGD+ + +
Sbjct: 86  AVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRK 145

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           ST+G++ T  G  ISW S  QK V LSTTEAEY+A TE  KE++WL  F  ELG  Q+  
Sbjct: 146 STTGFVFTLGGTVISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMG 205

Query: 29  TVQCDS 12
            +  DS
Sbjct: 206 ILHSDS 211


>KYP42640.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 448

 Score =  223 bits (568), Expect = 4e-68
 Identities = 102/189 (53%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
 Frame = -3

Query: 566 RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
           RF M++SK V  PL  HFK+S + SP ++ E+  M K+PY  A+GSLMY M+CTRPD+AY
Sbjct: 239 RFQMENSKVVGTPLAAHFKLSVKQSPSNEAEKTYMSKVPYVYAVGSLMYPMVCTRPDVAY 298

Query: 386 AVG-LSRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            VG +SRF SNP ++HW  ++WILRYL GT  + +C+G     L+ Y++ D+AGDV + +
Sbjct: 299 VVGTVSRFLSNPSREHWNAVKWILRYLHGTSGLRLCFGGDKPTLVGYSNSDMAGDVDSRK 358

Query: 209 STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
           STSGYL+ +AGG ++WQS+ Q+CV LSTTEAE+IA+TE  KE+LWLK+F +EL  VQ +Y
Sbjct: 359 STSGYLINFAGGVVAWQSRLQRCVTLSTTEAEFIAITEACKELLWLKKFLQELDFVQDKY 418

Query: 29  TVQCDS*SV 3
            +  DS SV
Sbjct: 419 PLFVDSQSV 427


>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  234 bits (597), Expect = 5e-68
 Identities = 107/179 (59%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RF+M+ +K V+ PL  HFK+  +  P S++E+  MQ++PY+SA+GSLMYAM+CTRPDIA+
Sbjct: 1070 RFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAH 1129

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SRF SNPG++HW+ ++WILRYL+GT  + +C+G+    L  YTD D+AGD+ T +
Sbjct: 1130 AVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAGDIDTRK 1189

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKR 33
            STSGYL+TYAGGA+SWQS+ QKCV LSTTEAE+IA  E SKE+LW+K+F +ELG VQ R
Sbjct: 1190 STSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASVEASKEMLWMKKFLQELGFVQDR 1248


>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  232 bits (591), Expect = 3e-67
 Identities = 110/186 (59%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
 Frame = -3

Query: 566  RFNMDSSKEVNCPLGTHFKMSTELSPHSKEEQLAMQKIPYASAIGSLMYAMICTRPDIAY 387
            RFNM ++K V  PL  HFK+S +  P  +E+   M  IPY+SA+GSLMYAM+CTRPDIA+
Sbjct: 1069 RFNMKNAKPVITPLVGHFKLSKKSCPTIREK---MSTIPYSSAVGSLMYAMVCTRPDIAH 1125

Query: 386  AVGL-SRFTSNPGKKHWEGLQWILRYLKGTLKMCICYGSTAEELLAYTDLDLAGDVTTMR 210
            AVG+ SR+ SNPGK HWE ++WILRYL+GT K+C+ +G     L  YTD D+AGD+   +
Sbjct: 1126 AVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCLRFGGAKPILEGYTDADMAGDLDDRK 1185

Query: 209  STSGYLVTYAGGAISWQSKQQKCVALSTTEAEYIAVTECSKEVLWLKRFTKELGVVQKRY 30
            STSGY+ T++GGAISWQSK QKC++LSTTEAEY+A TE  KE+LW+K+F +ELG+ Q+ Y
Sbjct: 1186 STSGYIFTFSGGAISWQSKLQKCISLSTTEAEYVAATEAGKEMLWMKKFLQELGLKQEEY 1245

Query: 29   TVQCDS 12
             V CDS
Sbjct: 1246 IVYCDS 1251