BLASTX nr result
ID: Lithospermum23_contig00043225
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00043225
(283 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAD34493.1 Gag-Pol [Ipomoea batatas] 108 2e-25
AFB73911.1 polyprotein [Citrus sinensis] 99 3e-22
AFB73912.1 polyprotein [Citrus sinensis] 96 6e-21
ACL97387.1 Gag-Pol polyprotein [Lotus japonicus] 91 2e-19
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] 89 2e-18
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 89 2e-18
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula] 89 2e-18
ACL97385.1 Gag-Pol polyprotein [Medicago truncatula] 85 3e-17
KYP67664.1 Retrovirus-related Pol polyprotein from transposon TN... 82 4e-16
KYP38095.1 Retrovirus-related Pol polyprotein from transposon TN... 82 4e-16
KYP36645.1 Retrovirus-related Pol polyprotein from transposon TN... 82 4e-16
KYP53032.1 Retrovirus-related Pol polyprotein from transposon TN... 82 4e-16
KYP42748.1 Retrovirus-related Pol polyprotein from transposon TN... 82 4e-16
CDY02901.1 BnaC04g25850D [Brassica napus] 77 4e-15
KZV31727.1 hypothetical protein F511_00531 [Dorcoceras hygrometr... 74 2e-13
KZV55537.1 hypothetical protein F511_09648 [Dorcoceras hygrometr... 72 6e-13
KNA08435.1 hypothetical protein SOVF_162690, partial [Spinacia o... 64 5e-10
KYP39955.1 hypothetical protein KK1_038730 [Cajanus cajan] 54 7e-08
KOM47261.1 hypothetical protein LR48_Vigan07g096500 [Vigna angul... 56 1e-07
KYP67041.1 Retrovirus-related Pol polyprotein from transposon TN... 54 2e-06
>BAD34493.1 Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 108 bits (269), Expect = 2e-25
Identities = 56/95 (58%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRS-KKNMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTL-N 176
GRS ER Q+SGR + +S KKN+ CYNC KKGHLKKDCW+L NSNP N+AST +
Sbjct: 205 GRSTER----GQSSGRGRSKSSKKNLTCYNCGKKGHLKKDCWNLAQNSNPQGNVASTSDD 260
Query: 177 GEALCCETATTYKGRMTFVDE*LIDFGVTFHMTSR 281
G ALCCE + +GR F D LID G T+HMTSR
Sbjct: 261 GSALCCEASIAREGRKRFADIWLIDSGATYHMTSR 295
>AFB73911.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 99.4 bits (246), Expect = 3e-22
Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLN--------NNSNPHEN 158
GRS ER SGSQN GR KFR KKN+KCYNC KKGH+KK+CWS SN
Sbjct: 204 GRSTERGPSGSQNQGRSKFRGKKNVKCYNCGKKGHVKKECWSNQKRREGKEPETSNAQGC 263
Query: 159 IASTL-NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMTSR 281
+AST +GE L E T +GR D LID G T+HMTSR
Sbjct: 264 VASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSR 305
>AFB73912.1 polyprotein [Citrus sinensis]
Length = 1309
Score = 95.5 bits (236), Expect = 6e-21
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLN--------NNSNPHEN 158
GRS ER SGSQN GR K RSKKN+KCYNC KKGH+KK+CWS +SN
Sbjct: 204 GRSTERGPSGSQNHGRSKSRSKKNVKCYNCGKKGHVKKECWSNQKRREGKEPESSNAQGC 263
Query: 159 IASTL-NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMTSR 281
+AST +GE L E +GR D LID G T+HMTSR
Sbjct: 264 VASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSR 305
>ACL97387.1 Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 91.3 bits (225), Expect = 2e-19
Identities = 50/102 (49%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTL--- 173
GRS ER SGSQN GR R K N+KCYNC K+GHLKKDCWS N S + AST
Sbjct: 204 GRSTERGPSGSQNHGRSTSRRKTNLKCYNCGKRGHLKKDCWS-NKKSGEKSSEASTSQGC 262
Query: 174 ------NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMTSR 281
+GE L E A + KG+ D ++D G T+HMT R
Sbjct: 263 VASTSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPR 304
>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 88.6 bits (218), Expect = 2e-18
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRS ER SGSQN GR K R KKN+KCY C KGH+KK+CW++ N + +
Sbjct: 204 GRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCV 263
Query: 162 ASTL-NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST +GE L E AT+ KG D ++D G T+HMT
Sbjct: 264 ASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMT 302
>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 88.6 bits (218), Expect = 2e-18
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRS ER SGSQN GR K R KKN+KCY C KGH+KK+CW++ N + +
Sbjct: 204 GRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCV 263
Query: 162 ASTL-NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST +GE L E AT+ KG D ++D G T+HMT
Sbjct: 264 ASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMT 302
>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 88.6 bits (218), Expect = 2e-18
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRS ER SGSQN GR K R KKN+KCY C KGH+KK+CW++ N + +
Sbjct: 204 GRSTERGPSGSQNHGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCV 263
Query: 162 ASTL-NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST +GE L E AT+ KG D ++D G T+HMT
Sbjct: 264 ASTSDDGEILYSEAATSSKGERRLNDVWIMDSGATWHMT 302
>ACL97385.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 84.7 bits (208), Expect = 3e-17
Identities = 48/101 (47%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------- 158
GRS ER SGSQN GR K R K N+KCY C KGH+KK+CW NN N +N
Sbjct: 204 GRSTERGPSGSQNHGRSKSRRKNNIKCYGCGMKGHVKKECW--NNKKNGEKNSEATTSQG 261
Query: 159 -IASTL-NGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
+AST +GE L E AT+ +G D ++D G T+HMT
Sbjct: 262 CVASTSDDGEILYSEAATSSEGERQLNDVWIMDSGATWHMT 302
>KYP67664.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 81.6 bits (200), Expect = 4e-16
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRSMER SSGSQN GR K R +KN+KCYNC +GH+KKDCW + + +
Sbjct: 155 GRSMERGSSGSQNHGRSKSRGRKNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCV 214
Query: 162 ASTLNGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST + A + +G + ++D G T+HMT
Sbjct: 215 ASTQEDGEILYSEAISSRGEKQLHECWILDSGATWHMT 252
>KYP38095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 81.6 bits (200), Expect = 4e-16
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRSMER SSGSQN GR K R +KN+KCYNC +GH+KKDCW + + +
Sbjct: 155 GRSMERGSSGSQNHGRSKSRGRKNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCV 214
Query: 162 ASTLNGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST + A + +G + ++D G T+HMT
Sbjct: 215 ASTQEDGEILYSEAISSRGEKQLHECWILDSGATWHMT 252
>KYP36645.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 81.6 bits (200), Expect = 4e-16
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRSMER SSGSQN GR K R +KN+KCYNC +GH+KKDCW + + +
Sbjct: 155 GRSMERGSSGSQNHGRSKSRGRKNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCV 214
Query: 162 ASTLNGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST + A + +G + ++D G T+HMT
Sbjct: 215 ASTQEDGEILYSEAISSRGEKQLHECWILDSGATWHMT 252
>KYP53032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 81.6 bits (200), Expect = 4e-16
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRSMER SSGSQN GR K R +KN+KCYNC +GH+KKDCW + + +
Sbjct: 204 GRSMERGSSGSQNHGRSKSRGRKNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCV 263
Query: 162 ASTLNGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST + A + +G + ++D G T+HMT
Sbjct: 264 ASTQEDGEILYSEAISSRGEKQLHECWILDSGATWHMT 301
>KYP42748.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 81.6 bits (200), Expect = 4e-16
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN-------I 161
GRSMER SSGSQN GR K R +KN+KCYNC +GH+KKDCW + + +
Sbjct: 204 GRSMERGSSGSQNHGRSKSRGRKNLKCYNCGMRGHMKKDCWHKKSGGGKNSEASTSQGCV 263
Query: 162 ASTLNGEALCCETATTYKGRMTFVDE*LIDFGVTFHMT 275
AST + A + +G + ++D G T+HMT
Sbjct: 264 ASTQEDGEILYSEAISSRGEKQLHECWILDSGATWHMT 301
>CDY02901.1 BnaC04g25850D [Brassica napus]
Length = 265
Score = 77.4 bits (189), Expect = 4e-15
Identities = 41/63 (65%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTL-NG 179
GRSME SSGS GR K RSK KCY+C KKGHLKKDCW L N NP NIA+T NG
Sbjct: 204 GRSMEHGSSGSHKHGRSKSRSKNTFKCYHCGKKGHLKKDCWEL-RNFNPQGNIANTSDNG 262
Query: 180 EAL 188
AL
Sbjct: 263 IAL 265
>KZV31727.1 hypothetical protein F511_00531 [Dorcoceras hygrometricum]
Length = 540
Score = 73.9 bits (180), Expect = 2e-13
Identities = 46/95 (48%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKK-NMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTLNG 179
GRS ER SGS SGR K RSKK N+ CY C GH KK+C NS+ N+AST G
Sbjct: 205 GRSTERDFSGSYRSGRSKSRSKKKNIYCYKCGGTGHFKKECTRSIVNSS-QGNVASTSGG 263
Query: 180 -EALCCETATTYKGRMTFVDE*LIDFGVTFHMTSR 281
E L E +GR F D ++D G T+HMT R
Sbjct: 264 AEILFSEATIVAEGRQKFSDAWIMDSGATWHMTYR 298
>KZV55537.1 hypothetical protein F511_09648 [Dorcoceras hygrometricum]
Length = 372
Score = 72.4 bits (176), Expect = 6e-13
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKK-NMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTLNG 179
GRS E SGS +GR KFRSKK N+ CY C KGH KK+C + + + N+AS +G
Sbjct: 155 GRSTEHDFSGSYRNGRSKFRSKKKNICCYKCGSKGHFKKEC-TRSIEKSFQGNVASNSDG 213
Query: 180 -EALCCETATTYKGRMTFVDE*LIDFGVTFHMTSR 281
E E T +G F D ++D G T+HMTSR
Sbjct: 214 AEIFFSEATTVAEGIHKFCDAWIMDSGATWHMTSR 248
>KNA08435.1 hypothetical protein SOVF_162690, partial [Spinacia oleracea]
Length = 260
Score = 63.5 bits (153), Expect = 5e-10
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHEN 158
GRSMER SSGS R K SKKN KC++C KKGH ++CW L N N N
Sbjct: 184 GRSMERGSSGSHYQNRSKSVSKKNAKCHHCGKKGHYNRECWLLKKNENDKGN 235
>KYP39955.1 hypothetical protein KK1_038730 [Cajanus cajan]
Length = 52
Score = 53.9 bits (128), Expect = 7e-08
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3
Query: 12 MERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDC 122
ME SSGSQN GR K R +KN++CYN KGH+KKDC
Sbjct: 1 MEHGSSGSQNHGRLKSRRRKNLECYNYGLKGHMKKDC 37
>KOM47261.1 hypothetical protein LR48_Vigan07g096500 [Vigna angularis]
Length = 164
Score = 55.8 bits (133), Expect = 1e-07
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTLNG 179
GRS + SSGSQ+ R + SKK++KCYNC K+GH+KK+CW + S + AST G
Sbjct: 98 GRSTKYGSSGSQSHDRSQ--SKKHLKCYNCGKRGHVKKECW--HKKSGRKNSDASTSQG 152
>KYP67041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 325
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 GRSMERISSGSQNSGRPKFRSKKNMKCYNCDKKGHLKKDCWSLNNNSNPHENIASTLNGE 182
GRSMER +S ++ K ++CY C + GH++K+C L N N + + A +
Sbjct: 204 GRSMERGNSSKGHTRSNSLSKSKKVRCYKCKEVGHIRKNCPQLKKNRNSNASAAVVRSSA 263
Query: 183 ALCCETATTYKG-------RMTFVDE*LIDFGVTFHMT 275
+ E++ G + F D +ID G ++HMT
Sbjct: 264 TVSSESSDEGDGGDVLTVSTIGFADTWVIDTGASYHMT 301