BLASTX nr result

ID: Lithospermum23_contig00043220 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00043220
         (252 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016556671.1 PREDICTED: F-box/kelch-repeat protein At3g23880 [...    52   5e-06
XP_006358329.1 PREDICTED: F-box/kelch-repeat protein At3g06240-l...    52   7e-06
XP_016558550.1 PREDICTED: F-box/kelch-repeat protein At3g23880-l...    52   1e-05

>XP_016556671.1 PREDICTED: F-box/kelch-repeat protein At3g23880 [Capsicum annuum]
          Length = 383

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 138 LQRLTVLSLLKFRCVCKLWFSLISWSKFKKTHLNHSKN 251
           L RL+V SLL+F+CV K W +LIS   FKK HLNH+KN
Sbjct: 9   LSRLSVKSLLRFKCVSKFWKTLISQPYFKKKHLNHAKN 46


>XP_006358329.1 PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           tuberosum]
          Length = 339

 Score = 52.0 bits (123), Expect = 7e-06
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +3

Query: 138 LQRLTVLSLLKFRCVCKLWFSLISWSKFKKTHLNHSKN 251
           L RL V SLL+F+CV KLW +LIS   FK  HLNH+KN
Sbjct: 10  LNRLPVRSLLRFKCVSKLWMTLISDPNFKMKHLNHAKN 47


>XP_016558550.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like [Capsicum
           annuum]
          Length = 380

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +3

Query: 138 LQRLTVLSLLKFRCVCKLWFSLISWSKFKKTHLNHSKN 251
           L RL V +LL+F+CV K W SLIS   FKK HLNH+KN
Sbjct: 9   LSRLPVKALLRFKCVSKFWNSLISQPYFKKKHLNHAKN 46


Top