BLASTX nr result

ID: Lithospermum23_contig00042471 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00042471
         (261 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EOY19200.1 Retrotransposon, unclassified-like protein [Theobroma...    57   1e-07
EOY25447.1 Uncharacterized protein TCM_016753 [Theobroma cacao]        57   2e-07
XP_017973011.1 PREDICTED: uncharacterized protein LOC108661357 [...    55   5e-07

>EOY19200.1 Retrotransposon, unclassified-like protein [Theobroma cacao]
          Length = 1368

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = -3

Query: 259  WLPSVPLLNHLAGF----VPVKHFMTDGYWNLMKQHEYGPNDQVSNILQCEVRRENSDEL 92
            W+   PL+N    F    + V +F  D  W++ K   + PN  V  IL+  + RE  D  
Sbjct: 904  WMGDEPLVNSFPSFSQSMMKVNYFFNDDAWDVDKLKTFIPNAIVEEILKIPISREKEDIA 963

Query: 91   IWKASNHGDFNLKATWKLLRE 29
             W  + +GDF++K+ W+LLR+
Sbjct: 964  YWALTANGDFSIKSAWELLRQ 984


>EOY25447.1 Uncharacterized protein TCM_016753 [Theobroma cacao]
          Length = 1275

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
 Frame = -3

Query: 259 WLPSVPLLNHLAGF----VPVKHFMTDGYWNLMKQHEYGPNDQVSNILQCEVRRENSDEL 92
           W+   PL+N    F    + V +F  D  W++ K     PN  V  IL+  + REN D  
Sbjct: 474 WMGDEPLVNSFPSFSQSMMKVNYFFNDDAWDVDKLKTVIPNAIVDEILKIPISRENEDIA 533

Query: 91  IWKASNHGDFNLKATWKLLRE 29
            W  + +GDF+ K+ W+LLR+
Sbjct: 534 YWALTPNGDFSTKSAWELLRQ 554


>XP_017973011.1 PREDICTED: uncharacterized protein LOC108661357 [Theobroma cacao]
          Length = 1329

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
 Frame = -3

Query: 259  WLPSVPLLNHLAGFVP----VKHFMTDGYWNLMKQHEYGPNDQVSNILQCEVRRENSDEL 92
            W+   PL+N    F      V HF  DG WN+ K +   P D V  IL   +   N D  
Sbjct: 1003 WMGDTPLVNRFPVFASSMTRVSHFYDDGTWNVDKLNNVLPEDVVVEILNISIDPLNDDRA 1062

Query: 91   IWKASNHGDFNLKATWKLLREIQ 23
             W  ++ G F  K+ W+++R+ Q
Sbjct: 1063 FWVPTSDGQFTTKSAWEIVRQRQ 1085


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