BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00042446
         (321 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN...    54   5e-06

>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1321

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +3

Query: 39  VSKGSLTVARGDFCCSYPSIRHTWVYVLVRYVNAIE*KNSPNLWCRKLGHMSDNGIKL 212
           ++KGSL VA+G  CC+   +  T+V V    +NA+E   SPNLW R+L H+S+ G++L
Sbjct: 378 LTKGSLVVAKGKLCCT---LYKTYVKVCKGQLNAVENDASPNLWHRRLAHISEKGLQL 432