BLASTX nr result
ID: Lithospermum23_contig00042322
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00042322
(354 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KFK32108.1 hypothetical protein AALP_AA6G199700 [Arabis alpina] 72 3e-23
CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera] 68 1e-22
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t... 75 3e-22
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 69 8e-22
CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera] 66 1e-21
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera] 67 5e-21
CAN69911.1 hypothetical protein VITISV_027081 [Vitis vinifera] 68 5e-21
KYP48756.1 Retrovirus-related Pol polyprotein from transposon TN... 66 5e-21
AAK29467.1 polyprotein-like [Solanum chilense] 75 1e-20
CAN65406.1 hypothetical protein VITISV_030853 [Vitis vinifera] 65 1e-20
KYP60296.1 Retrovirus-related Pol polyprotein from transposon TN... 64 1e-20
CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera] 69 1e-20
KYP54197.1 Retrovirus-related Pol polyprotein from transposon TN... 64 1e-20
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN... 69 2e-20
KYP31799.1 Retrovirus-related Pol polyprotein from transposon TN... 65 2e-20
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN... 69 2e-20
KYP63121.1 Retrovirus-related Pol polyprotein from transposon TN... 69 2e-20
KYP68900.1 Retrovirus-related Pol polyprotein from transposon TN... 64 3e-20
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 72 4e-20
KYP53808.1 Retrovirus-related Pol polyprotein from transposon TN... 65 5e-20
>KFK32108.1 hypothetical protein AALP_AA6G199700 [Arabis alpina]
Length = 1415
Score = 72.0 bits (175), Expect(2) = 3e-23
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 199 FNGKQHRVSFNKSI-QRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
F GKQHRVSF S RK IL+LV+SDVC P+K K++GG SYFV FIDD+SR
Sbjct: 220 FAGKQHRVSFTSSSPSRKPDILDLVHSDVCSPLKTKSLGGASYFVTFIDDHSR 272
Score = 63.9 bits (154), Expect(2) = 3e-23
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIE--PTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
ARG+K Y Q K +N +E ++LW RLGHMSEKGL++LS+K +P +
Sbjct: 152 ARGDKHSFFYWMQAKVSKDIVNVVENDDAIELWHKRLGHMSEKGLSVLSKKEAIPGISGL 211
Query: 176 HVENCTHCLMG 208
H++ C +C G
Sbjct: 212 HLQKCAYCFAG 222
>CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 68.2 bits (165), Expect(2) = 1e-22
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+GNK +LY Q IN ++ T +LW NRLGHMSEKGL IL++KN+L
Sbjct: 273 AKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKG 332
Query: 176 HVENCTHCLMG 208
++ C HCL G
Sbjct: 333 SLKRCAHCLAG 343
Score = 65.9 bits (159), Expect(2) = 1e-22
Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNK-SIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RV+F RK +L+LVYSDVCGPMK KT+GG YFV FIDD+SR
Sbjct: 343 GKQTRVAFKTLRYTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 393
>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease CAA32025.1 unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 74.7 bits (182), Expect(2) = 3e-22
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +1
Query: 205 GKQHRVSFNKSIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQHRVSF S +RK IL+LVYSDVCGPM+++++GG YFV FIDD SR
Sbjct: 463 GKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASR 512
Score = 57.8 bits (138), Expect(2) = 3e-22
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTI--EPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+G TLYR +GE+N E ++ LW R+GHMSEKGL IL++K+++
Sbjct: 393 AKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGT 452
Query: 176 HVENCTHCLMG 208
V+ C +CL G
Sbjct: 453 TVKPCDYCLFG 463
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 68.9 bits (167), Expect(2) = 8e-22
Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSF-NKSIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RVSF + RK++ L+L++SDVCGPMKV+++GG SYFV FIDDYSR
Sbjct: 458 GKQRRVSFMSHPPTRKSEPLDLIHSDVCGPMKVRSLGGASYFVTFIDDYSR 508
Score = 62.0 bits (149), Expect(2) = 8e-22
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
ARGNK LY Q S +N +E +LW RLGHMS KG++ L++K+ L +A
Sbjct: 388 ARGNKSSNLYSLQSSVSDDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEA 447
Query: 176 HVENCTHCLMG 208
++ C HCL G
Sbjct: 448 KLDKCVHCLAG 458
>CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 66.2 bits (160), Expect(2) = 1e-21
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+GNK +LY Q IN ++ T +LW NRLGHMSEKGL IL++ N+L
Sbjct: 341 AKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKNNLLSGMKKG 400
Query: 176 HVENCTHCLMG 208
++ C HCL G
Sbjct: 401 SLKRCAHCLAG 411
Score = 64.3 bits (155), Expect(2) = 1e-21
Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RV+F K+++ RK + +LVYSDVCGPMK KT+GG YFV FIDD+SR
Sbjct: 411 GKQTRVAF-KTLRHTRKPGMFDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 461
>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 67.0 bits (162), Expect(2) = 5e-21
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+GNK +LY Q IN ++ T +LW N+LGHMSEKGL IL++KN+L
Sbjct: 370 AKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKKNLLXGMKKG 429
Query: 176 HVENCTHCLMG 208
++ C HCL G
Sbjct: 430 SLKRCAHCLAG 440
Score = 61.2 bits (147), Expect(2) = 5e-21
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RV+F K++ RK +L+LVYSDV GPMK KT+GG YFV FIDD+SR
Sbjct: 440 GKQTRVAF-KTLHHTRKPGMLDLVYSDVYGPMKTKTLGGSLYFVTFIDDHSR 490
>CAN69911.1 hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 68.2 bits (165), Expect(2) = 5e-21
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+GNK +LY Q IN ++ T +LW NRLGHMSEKGL IL++KN+L
Sbjct: 342 AKGNKSSSLYLMQARVIDSNINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKG 401
Query: 176 HVENCTHCLMG 208
++ C HCL G
Sbjct: 402 SLKRCAHCLAG 412
Score = 60.1 bits (144), Expect(2) = 5e-21
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RV+F K++ RK +L+LVYSDVCGPMK KT+ YFV FIDD+SR
Sbjct: 412 GKQTRVAF-KTLHHTRKPGMLDLVYSDVCGPMKTKTLSESLYFVTFIDDHSR 462
>KYP48756.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 285
Score = 65.9 bits (159), Expect(2) = 5e-21
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNKSI-QRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RVSF K RK+++L+LV+SDVCGP+KVK+ G YFVIFIDD SR
Sbjct: 169 GKQTRVSFKKHPPSRKSELLQLVHSDVCGPLKVKSFSGALYFVIFIDDCSR 219
Score = 62.4 bits (150), Expect(2) = 5e-21
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
A+G K LY + K +N ++ LW RL H+SEKGLN L++K+VL A +
Sbjct: 101 AKGEKNSKLYWTKALVAKDSVNAMDMEASLWHRRLSHISEKGLNCLAQKDVLQGLKSAEL 160
Query: 182 ENCTHCLMG 208
E C+HC+ G
Sbjct: 161 EKCSHCMAG 169
>AAK29467.1 polyprotein-like [Solanum chilense]
Length = 1328
Score = 75.5 bits (184), Expect(2) = 1e-20
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +1
Query: 205 GKQHRVSFNKSIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQHRVSF S +RK+ IL+LVYSDVCGPM+++++GG YFV FIDD SR
Sbjct: 464 GKQHRVSFQTSSERKSNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASR 513
Score = 51.6 bits (122), Expect(2) = 1e-20
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTI--EPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+G TLYR +GE+N E + LW R+GH SEKGL ILS+K+++
Sbjct: 394 AKGVARGTLYRTNAEICQGELNAAHEENSADLWHKRMGHTSEKGLQILSKKSLISFTKGT 453
Query: 176 HVENCTHCLMG 208
++ C + L G
Sbjct: 454 TIKPCNYWLFG 464
>CAN65406.1 hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 65.5 bits (158), Expect(2) = 1e-20
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RV+F K++ RK +L+LVYSDVCGPMK KT+GG YFV FIDD+SR
Sbjct: 214 GKQTRVAF-KTLHHTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSR 264
Score = 61.6 bits (148), Expect(2) = 1e-20
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 NKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHVE 184
NK +LY Q IN ++ T KLW NRL HMSEKGL I+++KN+L ++
Sbjct: 147 NKSSSLYLMQVRVIDSSINAVDDDSTFKLWHNRLSHMSEKGLMIMAKKNLLSGMKKGSLK 206
Query: 185 NCTHCLMG 208
C HCL G
Sbjct: 207 RCAHCLGG 214
>KYP60296.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 990
Score = 64.3 bits (155), Expect(2) = 1e-20
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNKSI-QRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RVSF K RK+K+L+LV+SDVCGP+KVK+ G YFV FIDD S+
Sbjct: 373 GKQTRVSFKKHPPSRKSKLLQLVHSDVCGPLKVKSFSGALYFVTFIDDCSK 423
Score = 62.8 bits (151), Expect(2) = 1e-20
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG K LY + K +N ++ LW RL H+SEKGLN L++K+VL A +
Sbjct: 305 ARGEKNSKLYWTKALVAKDNVNAMDMEASLWHRRLSHISEKGLNCLAKKDVLQGLKIAEL 364
Query: 182 ENCTHCLMG 208
E C+HC+ G
Sbjct: 365 EKCSHCMAG 373
>CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 68.6 bits (166), Expect(2) = 1e-20
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEP--TMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+GNK +LY Q IN ++ T +LW NRLGHMSEKGL IL++KN+L
Sbjct: 257 AKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKG 316
Query: 176 HVENCTHCLMG 208
++ C HCL G
Sbjct: 317 SLKRCAHCLAG 327
Score = 58.2 bits (139), Expect(2) = 1e-20
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GK RV+F K++ RK +L+LVY DVCGPMK KT+ G YFV FIDD+SR
Sbjct: 327 GKXTRVAF-KTLHHTRKPGMLDLVYFDVCGPMKTKTLXGSLYFVTFIDDHSR 377
>KYP54197.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 512
Score = 63.9 bits (154), Expect(2) = 1e-20
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG K LY + K +N ++ LW RL H+SEKGLN L++K+VL A +
Sbjct: 48 ARGEKNSKLYWTKALVAKDSVNAMDMEASLWHRRLSHISEKGLNCLAKKDVLQGLKSAEL 107
Query: 182 ENCTHCLMG 208
E C+HC+ G
Sbjct: 108 EKCSHCMAG 116
Score = 62.8 bits (151), Expect(2) = 1e-20
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNKSI-QRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ VSF K + RK+++L+LV+SDVCGP+KVK+ G YFV FIDD SR
Sbjct: 116 GKQTIVSFKKHLPSRKSELLQLVHSDVCGPLKVKSFSGALYFVTFIDDCSR 166
>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 69.3 bits (168), Expect(2) = 2e-20
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG KE +LY Q KGE+N +++W RLGH+SEKGL+IL+RK +L +
Sbjct: 378 ARGKKEGSLYVMQAKLCKGEVNITTDDLEVWHKRLGHISEKGLHILARKQLLSNVKGKSL 437
Query: 182 ENCTHCLMG 208
+ C HCL G
Sbjct: 438 DPCAHCLAG 446
Score = 57.0 bits (136), Expect(2) = 2e-20
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQHRV+F +S R+ IL+LV++DVC M K+IGG YFV FIDD+SR
Sbjct: 446 GKQHRVAFQRSSPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSR 496
>KYP31799.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 294
Score = 64.7 bits (156), Expect(2) = 2e-20
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNKSI-QRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RVSFNK RK+++LEL +SDVCGP+KVK+ G YFV FIDD SR
Sbjct: 233 GKQTRVSFNKHPPSRKSELLELGHSDVCGPLKVKSFSGALYFVTFIDDCSR 283
Score = 61.6 bits (148), Expect(2) = 2e-20
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG K LY + K N + LW RLGH+SEKGLN L++KNV A +
Sbjct: 165 ARGKKNSKLYWTKALVAKDSANAMYMEASLWHRRLGHISEKGLNCLAKKNVFLGLKSAEL 224
Query: 182 ENCTHCLMG 208
+ C+HC+ G
Sbjct: 225 DKCSHCMAG 233
>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 68.9 bits (167), Expect(2) = 2e-20
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG KE +LY Q KGE+N +++W RLGH+SEKGL+IL+RK +L +
Sbjct: 378 ARGKKEGSLYVMQAKLCKGEVNITTDDIEVWHKRLGHISEKGLHILARKQLLSNVKGKSL 437
Query: 182 ENCTHCLMG 208
+ C HCL G
Sbjct: 438 DPCAHCLAG 446
Score = 57.0 bits (136), Expect(2) = 2e-20
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQHRV+F +S R+ IL+LV++DVC M K+IGG YFV FIDD+SR
Sbjct: 446 GKQHRVAFQRSSPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSR 496
>KYP63121.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 344
Score = 68.9 bits (167), Expect(2) = 2e-20
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG KE +LY Q KGE+N +++W RLGH+SEKGL+IL+RK +L +
Sbjct: 70 ARGKKEGSLYVMQAKLCKGEVNITTDDIEVWHKRLGHISEKGLHILARKQLLSNVKGKSL 129
Query: 182 ENCTHCLMG 208
+ C HCL G
Sbjct: 130 DPCAHCLAG 138
Score = 57.0 bits (136), Expect(2) = 2e-20
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ--RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQHRV+F +S R+ IL+LV++DVC M K+IGG YFV FIDD+SR
Sbjct: 138 GKQHRVAFQRSSPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSR 188
>KYP68900.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 226
Score = 63.9 bits (154), Expect(2) = 3e-20
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNKSIQ-RKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RVSF K + RK+K+LELV+SDVCGP+KVK+ YFV FIDD S+
Sbjct: 169 GKQTRVSFKKHLSSRKSKLLELVHSDVCGPLKVKSFSVALYFVTFIDDCSK 219
Score = 61.6 bits (148), Expect(2) = 3e-20
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
ARG K LY + K +N + LW RLGH+SEKGLN L++KNVL A +
Sbjct: 101 ARGEKNSKLYWTKALVAKDSVNAMYMEASLWHRRLGHISEKGLNCLAKKNVLLGLKSAEL 160
Query: 182 ENCTHCLMG 208
E C+H + G
Sbjct: 161 EKCSHFMAG 169
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1321
Score = 71.6 bits (174), Expect(2) = 4e-20
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +1
Query: 205 GKQHRVSFNKSIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GK HRVSF KS RK LELV+SDVCGPM+V+++GG YFV FIDD SR
Sbjct: 456 GKHHRVSFKKSSNRKKNKLELVHSDVCGPMEVESLGGNKYFVTFIDDASR 505
Score = 53.5 bits (127), Expect(2) = 4e-20
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIE--PTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDA 175
A+G TLY+ KG++N +E + LW RL H+SEKGL +L++++++P+
Sbjct: 386 AKGKLCCTLYKTYVKVCKGQLNAVENDASPNLWHRRLAHISEKGLQLLAKQSLIPQAKGD 445
Query: 176 HVENCTHCLMGNN 214
+ C +C+ G +
Sbjct: 446 FLNPCDYCVFGKH 458
>KYP53808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 464
Score = 65.1 bits (157), Expect(2) = 5e-20
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 205 GKQHRVSFNK-SIQRKTKILELVYSDVCGPMKVKTIGGCSYFVIFIDDYSR 354
GKQ RVSF K RK+++LELV+SDVCGP+KVK+ G YFV FIDD SR
Sbjct: 362 GKQARVSFKKYPPSRKSELLELVHSDVCGPLKVKSFNGALYFVTFIDDCSR 412
Score = 59.7 bits (143), Expect(2) = 5e-20
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 2 ARGNKERTLYRAQFSSYKGEINTIEPTMKLWQNRLGHMSEKGLNILSRKNVLPKFTDAHV 181
A+G K LY + K +N + LW RLGH+SEKG+N L++K++L + +
Sbjct: 294 AKGEKNSKLYWTKALVAKDSVNAMYMESSLWHRRLGHISEKGMNCLAKKDMLLGLKNVEL 353
Query: 182 ENCTHCLMG 208
E C+HC+ G
Sbjct: 354 EKCSHCMAG 362