BLASTX nr result
ID: Lithospermum23_contig00041839
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00041839
(314 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017699088.1 PREDICTED: mediator of RNA polymerase II transcri... 70 2e-12
CDX94434.1 BnaC01g17500D [Brassica napus] 70 4e-12
KQK01434.1 hypothetical protein BRADI_3g55810 [Brachypodium dist... 68 1e-11
XP_015888463.1 PREDICTED: probable mediator of RNA polymerase II... 66 3e-11
XP_006437600.1 hypothetical protein CICLE_v10032221mg [Citrus cl... 67 4e-11
KDO52724.1 hypothetical protein CISIN_1g0219111mg [Citrus sinensis] 67 6e-11
XP_017699087.1 PREDICTED: mediator of RNA polymerase II transcri... 64 3e-10
EMS59825.1 rRNA 2'-O-methyltransferase fibrillarin 1 [Triticum u... 64 4e-10
XP_011030167.1 PREDICTED: probable mediator of RNA polymerase II... 64 4e-10
XP_011030166.1 PREDICTED: probable mediator of RNA polymerase II... 64 5e-10
KXS22194.1 Fibrillarin [Gonapodya prolifera JEL478] 63 5e-10
XP_010016160.1 PREDICTED: rRNA 2'-O-methyltransferase fibrillari... 62 7e-10
XP_001418865.1 predicted protein [Ostreococcus lucimarinus CCE99... 64 7e-10
KFQ52633.1 rRNA 2'-O-methyltransferase fibrillarin, partial [Nes... 62 7e-10
OMO91073.1 Fibrillarin [Corchorus capsularis] 64 7e-10
KQL08849.1 rRNA 2'-O-methyltransferase fibrillarin [Amazona aest... 62 7e-10
JAU04932.1 Mediator of RNA polymerase II transcription subunit 3... 62 9e-10
OMH86401.1 rRNA 2'-O-methyltransferase fibrillarin [Zancudomyces... 64 9e-10
AGM38071.1 putative fibrillarin, partial [Stenocereus gummosus] 62 1e-09
XP_004308063.1 PREDICTED: mediator of RNA polymerase II transcri... 64 1e-09
>XP_017699088.1 PREDICTED: mediator of RNA polymerase II transcription subunit 36a
isoform X3 [Phoenix dactylifera]
Length = 247
Score = 70.1 bits (170), Expect = 2e-12
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP YRMLV MV V+ Q DQVC++ +
Sbjct: 113 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFADVAQPDQVCILDVAL 172
Query: 110 IIMHFLLEGTVYML 69
+FL G +++
Sbjct: 173 NASYFLKNGGHFVI 186
>CDX94434.1 BnaC01g17500D [Brassica napus]
Length = 259
Score = 69.7 bits (169), Expect = 4e-12
Identities = 40/64 (62%), Positives = 45/64 (70%), Gaps = 6/64 (9%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV VV Q DQVC +Y
Sbjct: 184 EFSHRSGRDLVNMAKKRTNIIPIIEDARHPAKYRMLVGMVDVVFADVAQPDQVCFLYYIL 243
Query: 110 IIMH 99
+ +H
Sbjct: 244 LSVH 247
>KQK01434.1 hypothetical protein BRADI_3g55810 [Brachypodium distachyon]
Length = 246
Score = 68.2 bits (165), Expect = 1e-11
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 6/63 (9%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP YRMLV MV V+ Q DQV ++Y C
Sbjct: 171 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQVYILYTFC 230
Query: 110 IIM 102
++
Sbjct: 231 KVV 233
>XP_015888463.1 PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b [Ziziphus jujuba]
Length = 172
Score = 65.9 bits (159), Expect = 3e-11
Identities = 37/54 (68%), Positives = 40/54 (74%), Gaps = 6/54 (11%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVC 129
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ Q DQVC
Sbjct: 113 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPSKYRMLVSMVDVIFSDVAQPDQVC 166
>XP_006437600.1 hypothetical protein CICLE_v10032221mg [Citrus clementina]
ESR50840.1 hypothetical protein CICLE_v10032221mg
[Citrus clementina]
Length = 226
Score = 66.6 bits (161), Expect = 4e-11
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ Q DQVC + C
Sbjct: 135 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVCFL---C 191
Query: 110 IIM 102
+I+
Sbjct: 192 LIL 194
>KDO52724.1 hypothetical protein CISIN_1g0219111mg [Citrus sinensis]
Length = 264
Score = 66.6 bits (161), Expect = 6e-11
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ Q DQVC + C
Sbjct: 175 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVCFL---C 231
Query: 110 IIM 102
+I+
Sbjct: 232 LIL 234
>XP_017699087.1 PREDICTED: mediator of RNA polymerase II transcription subunit 36a
isoform X2 [Phoenix dactylifera]
Length = 222
Score = 64.3 bits (155), Expect = 3e-10
Identities = 36/56 (64%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLDQVCVIYASCI 108
EFSH+SGRDLVNM KK TN PIIEDA HP YRMLV MV V+ D A+CI
Sbjct: 113 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFADVAQPDQANCI 168
>EMS59825.1 rRNA 2'-O-methyltransferase fibrillarin 1 [Triticum urartu]
Length = 266
Score = 64.3 bits (155), Expect = 4e-10
Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLDQVCVIYASCI 108
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ D A+CI
Sbjct: 113 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQANCI 168
>XP_011030167.1 PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b isoform X4 [Populus euphratica]
Length = 269
Score = 64.3 bits (155), Expect = 4e-10
Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLDQVCVIYASCI 108
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ D A+CI
Sbjct: 177 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQANCI 232
>XP_011030166.1 PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b isoform X3 [Populus euphratica]
Length = 286
Score = 64.3 bits (155), Expect = 5e-10
Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLDQVCVIYASCI 108
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ D A+CI
Sbjct: 177 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQANCI 232
>KXS22194.1 Fibrillarin [Gonapodya prolifera JEL478]
Length = 200
Score = 63.2 bits (152), Expect = 5e-10
Identities = 39/67 (58%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLDQVCVIYASCIIMH- 99
EFSH+SGRDL+NM KK TN PIIEDA HP +YRMLV MV VV D A I M+
Sbjct: 70 EFSHRSGRDLINMAKKRTNVIPIIEDARHPHKYRMLVSMVDVVFADVAQPDQARIISMNA 129
Query: 98 --FLLEG 84
FL +G
Sbjct: 130 HMFLKQG 136
>XP_010016160.1 PREDICTED: rRNA 2'-O-methyltransferase fibrillarin, partial [Nestor
notabilis]
Length = 170
Score = 62.4 bits (150), Expect = 7e-10
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDL+N+ KK TN P+IEDA HP +YRML+ MV V+ Q DQ ++ +
Sbjct: 96 EFSHRSGRDLINVAKKRTNVIPVIEDARHPHKYRMLIGMVDVIFADVAQPDQTRIVALNA 155
Query: 110 IIMHFLLEGTVYML 69
HFL G +++
Sbjct: 156 --QHFLRRGGHFLI 167
>XP_001418865.1 predicted protein [Ostreococcus lucimarinus CCE9901] ABO97158.1
predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 63.5 bits (153), Expect = 7e-10
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMV-----YVVQLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP++YRML+ MV V Q DQ ++ +
Sbjct: 113 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPQKYRMLIGMVDTIFADVAQPDQARIVGLNA 172
Query: 110 IIMHFLLEGTVYML 69
+FL +G +M+
Sbjct: 173 --QYFLKQGGNFMI 184
>KFQ52633.1 rRNA 2'-O-methyltransferase fibrillarin, partial [Nestor notabilis]
Length = 171
Score = 62.4 bits (150), Expect = 7e-10
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDL+N+ KK TN P+IEDA HP +YRML+ MV V+ Q DQ ++ +
Sbjct: 97 EFSHRSGRDLINVAKKRTNVIPVIEDARHPHKYRMLIGMVDVIFADVAQPDQTRIVALNA 156
Query: 110 IIMHFLLEGTVYML 69
HFL G +++
Sbjct: 157 --QHFLRRGGHFLI 168
>OMO91073.1 Fibrillarin [Corchorus capsularis]
Length = 249
Score = 63.5 bits (153), Expect = 7e-10
Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV+V+ D
Sbjct: 119 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVHVIFSD 164
>KQL08849.1 rRNA 2'-O-methyltransferase fibrillarin [Amazona aestiva]
Length = 175
Score = 62.4 bits (150), Expect = 7e-10
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDL+N+ KK TN P+IEDA HP +YRML+ MV V+ Q DQ ++ +
Sbjct: 18 EFSHRSGRDLINVAKKRTNVIPVIEDARHPHKYRMLIGMVDVIFADVAQPDQTRIVALNA 77
Query: 110 IIMHFLLEGTVYML 69
HFL G +++
Sbjct: 78 --QHFLRRGGHFLI 89
>JAU04932.1 Mediator of RNA polymerase II transcription subunit 36a, partial
[Noccaea caerulescens] JAU54521.1 Mediator of RNA
polymerase II transcription subunit 36a, partial
[Noccaea caerulescens]
Length = 148
Score = 61.6 bits (148), Expect = 9e-10
Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ D
Sbjct: 14 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 59
>OMH86401.1 rRNA 2'-O-methyltransferase fibrillarin [Zancudomyces culisetae]
Length = 356
Score = 63.9 bits (154), Expect = 9e-10
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDL+NM KK TN PIIEDA HP +YRMLV MV VV Q DQ +I
Sbjct: 232 EFSHRSGRDLINMAKKRTNVVPIIEDARHPAKYRMLVPMVDVVFADVAQPDQARII---A 288
Query: 110 IIMHFLLEGTVYML 69
+ HF L+ + +++
Sbjct: 289 LNSHFFLKNSGFVV 302
>AGM38071.1 putative fibrillarin, partial [Stenocereus gummosus]
Length = 157
Score = 61.6 bits (148), Expect = 1e-09
Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVVQLD 138
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ D
Sbjct: 24 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 69
>XP_004308063.1 PREDICTED: mediator of RNA polymerase II transcription subunit 36a
[Fragaria vesca subsp. vesca]
Length = 304
Score = 63.5 bits (153), Expect = 1e-09
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
Frame = -1
Query: 272 EFSHKSGRDLVNMVKK*TNG-PIIEDASHPEEYRMLVRMVYVV-----QLDQVCVIYASC 111
EFSH+SGRDLVNM KK TN PIIEDA HP +YRMLV MV V+ Q DQ ++ +
Sbjct: 172 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVAMVDVIFSDVAQPDQARILALNA 231
Query: 110 IIMHFLLEGTVYML-----CFFCTL 51
+FL G +++ C CT+
Sbjct: 232 --SYFLKSGGHFVISIKANCIDCTV 254