BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00040983
         (335 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP08449.1 unnamed protein product [Coffea canephora]                  61   1e-08
XP_016551756.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   2e-07
GAV62103.1 PPR domain-containing protein/PPR_1 domain-containing...    54   6e-06
XP_009781997.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   6e-06
XP_019259497.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   8e-06
XP_010673744.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   8e-06

>CDP08449.1 unnamed protein product [Coffea canephora]
          Length = 714

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
 Frame = +2

Query: 71  ITIRSELLHSISRTLTTLASQNQNMNSPXXXXXXXXXXXXXXQGNT----NSSAFHHLNP 238
           + ++  +L + S   +  AS + + +S               QG      N S FH LNP
Sbjct: 6   LLLKKPILRASSAAASAFASTSAHPSSSDTFLSEKILWGLKQQGKKPASFNPSLFHELNP 65

Query: 239 YIFSQLLYRCRDNLHLGIKFLDLVATKCPNFR 334
            IF+++L++CR+NL +G +F+DLV+  CPNF+
Sbjct: 66  LIFTEVLHKCRENLQVGQRFIDLVSLNCPNFK 97


>XP_016551756.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Capsicum annuum]
          Length = 761

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
 Frame = +2

Query: 206 TNSSA-FHHLNPYIFSQLLYRCRDNLHLGIKFLDLVATKCPNFR 334
           TNSS  FH LNP+ F ++L  CRDNLHL  KF+DL +  CPNF+
Sbjct: 101 TNSSPLFHRLNPFTFLEVLGNCRDNLHLAQKFIDLFSLNCPNFK 144


>GAV62103.1 PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2
           domain-containing protein [Cephalotus follicularis]
          Length = 718

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
 Frame = +2

Query: 74  TIRSELLHSISRTLTTLASQNQNMNSPXXXXXXXXXXXXXX---QGNTNSSAFHH--LNP 238
           T+++ L H   +TL T  +++Q +  P                 QGN NS   +   LNP
Sbjct: 12  TLKTLLKHV--KTLKTFPNRDQGLGLPTPLSHSFMVEKILLSLKQGNVNSLRNYQFRLNP 69

Query: 239 YIFSQLLYRCRDNLHLGIKFLDLVATKCPNFR 334
            +  ++LYRCRDNL+LG +F+D VA  C NF+
Sbjct: 70  LMVVEVLYRCRDNLYLGQRFIDYVALNCLNFK 101


>XP_009781997.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           isoform X1 [Nicotiana sylvestris] XP_009781998.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110 isoform X1 [Nicotiana sylvestris]
           XP_016451924.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g01110 [Nicotiana tabacum]
           XP_016451926.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g01110 [Nicotiana tabacum]
          Length = 726

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +2

Query: 206 TNSSAF-HHLNPYIFSQLLYRCRDNLHLGIKFLDLVATKCPNFR 334
           TNSS   H LNP  F ++L  CRDNLHL  KF++LV   CPNF+
Sbjct: 66  TNSSLLLHRLNPSTFLEVLGNCRDNLHLAQKFINLVTVNCPNFK 109


>XP_019259497.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Nicotiana attenuata] XP_019259498.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Nicotiana attenuata] XP_019259499.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Nicotiana attenuata] OIT39790.1 pentatricopeptide
           repeat-containing protein [Nicotiana attenuata]
          Length = 726

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +2

Query: 206 TNSSAF-HHLNPYIFSQLLYRCRDNLHLGIKFLDLVATKCPNFR 334
           TNSS   H LNP  F ++L  CRDNLHL  KF++LV   CPNF+
Sbjct: 66  TNSSLLLHRLNPSTFLEVLGSCRDNLHLAQKFINLVTVNCPNFK 109


>XP_010673744.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           isoform X1 [Beta vulgaris subsp. vulgaris]
           XP_010673745.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g01110 isoform X1 [Beta
           vulgaris subsp. vulgaris] XP_019104397.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           isoform X1 [Beta vulgaris subsp. vulgaris] KMT14591.1
           hypothetical protein BVRB_4g073610 [Beta vulgaris subsp.
           vulgaris]
          Length = 733

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 20/41 (48%), Positives = 30/41 (73%)
 Frame = +2

Query: 212 SSAFHHLNPYIFSQLLYRCRDNLHLGIKFLDLVATKCPNFR 334
           S+ +H L PY  +Q++Y+CR+NL LG+KF+D +   CP FR
Sbjct: 76  SNIYHTLTPYDIAQIVYQCRENLQLGLKFIDSLLLNCPKFR 116