BLASTX nr result
ID: Lithospermum23_contig00040968
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00040968
(481 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013614869.1 PREDICTED: cold shock domain-containing protein 3... 72 2e-12
KFK30234.1 hypothetical protein AALP_AA7G235000 [Arabis alpina] 71 9e-12
CDY47048.1 BnaAnng08360D [Brassica napus] 70 1e-11
XP_013598422.1 PREDICTED: cold shock protein 1-like [Brassica ol... 70 1e-11
XP_013748967.1 PREDICTED: cold shock protein 1 [Brassica napus] 70 2e-11
XP_009138402.1 PREDICTED: cold shock protein 1 [Brassica rapa] 70 2e-11
XP_009147904.1 PREDICTED: cold shock domain-containing protein 3... 70 2e-11
XP_011099849.1 PREDICTED: cold shock domain-containing protein 3... 69 3e-11
XP_010489426.1 PREDICTED: cold shock domain-containing protein 3... 69 4e-11
XP_013616252.1 PREDICTED: cold shock domain-containing protein 3... 66 4e-11
XP_013733372.1 PREDICTED: cold shock domain-containing protein 3... 66 4e-11
XP_010489425.1 PREDICTED: cold shock domain-containing protein 3... 69 4e-11
CDX75546.1 BnaA01g01560D [Brassica napus] 68 4e-11
XP_013616250.1 PREDICTED: cold shock domain-containing protein 3... 66 5e-11
XP_013729766.1 PREDICTED: cold shock domain-containing protein 3... 66 5e-11
XP_013643636.1 PREDICTED: cold shock domain-containing protein 3... 69 7e-11
XP_006412031.1 hypothetical protein EUTSA_v10026001mg [Eutrema s... 68 1e-10
ADE80751.1 cold shock domain protein 1 [Eutrema salsugineum] 68 1e-10
KFK40166.1 hypothetical protein AALP_AA3G339200 [Arabis alpina] 68 1e-10
CDY35705.1 BnaC02g09710D [Brassica napus] 66 1e-10
>XP_013614869.1 PREDICTED: cold shock domain-containing protein 3-like [Brassica
oleracea var. oleracea]
Length = 250
Score = 72.4 bits (176), Expect = 2e-12
Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRR---GGCYTCGGQGHMARDCQQK 360
GACYTCGG GHMAR CPS R+ GGCY CGG GH+ARDC ++
Sbjct: 150 GACYTCGGSGHMARECPSKRQSGGGGCYECGGAGHLARDCDKR 192
Score = 63.2 bits (152), Expect = 5e-09
Identities = 28/48 (58%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP--------SGRRGGCYTCGGQGHMARDCQQK 360
GACYTCG GH+AR C SG G CYTCGG GHMAR+C K
Sbjct: 121 GACYTCGDTGHLARDCVKKSGGERVSGGGGACYTCGGSGHMARECPSK 168
Score = 61.2 bits (147), Expect = 3e-08
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC-PSGRRGGCYTCGGQGHMARDCQQK 360
G+CY CG GH+A+ C G RG CYTCG GH+ARDC +K
Sbjct: 99 GSCYNCGDAGHLAKDCRDGGERGACYTCGDTGHLARDCVKK 139
>KFK30234.1 hypothetical protein AALP_AA7G235000 [Arabis alpina]
Length = 268
Score = 70.9 bits (172), Expect = 9e-12
Identities = 30/41 (73%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRR-GGCYTCGGQGHMARDCQQK 360
G CYTCGGVGHMAR C S R+ G CY CGG GHMARDC +K
Sbjct: 195 GTCYTCGGVGHMARDCASKRQPGACYNCGGTGHMARDCDRK 235
Score = 54.7 bits (130), Expect = 6e-06
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGGCYTCGGQGHMARDC 369
G CY CG GHMA+ C + GCY CG GH ARDC
Sbjct: 100 GGCYNCGESGHMAKDCEGPGKEGCYKCGDLGHFARDC 136
Score = 54.7 bits (130), Expect = 6e-06
Identities = 27/49 (55%), Positives = 27/49 (55%), Gaps = 12/49 (24%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP--------SGRRGG----CYTCGGQGHMARDC 369
GACY CGG GHMAR C G RGG CYTC GH ARDC
Sbjct: 217 GACYNCGGTGHMARDCDRKASSGGGGGGRGGNNNKCYTCDKVGHFARDC 265
>CDY47048.1 BnaAnng08360D [Brassica napus]
Length = 235
Score = 70.1 bits (170), Expect = 1e-11
Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-CYTCGGQGHMARDCQQK 360
GACYTCGGVGHMAR C + R+ G CY CGG GH+ARDC Q+
Sbjct: 162 GACYTCGGVGHMARDCATKRQSGTCYECGGTGHLARDCDQR 202
Score = 57.0 bits (136), Expect = 8e-07
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC--PSGRRGG---CYTCGGQGHMARDCQQK 360
G CY CG GH+A+ C G RGG CY+CG GH+ARDC QK
Sbjct: 101 GGCYNCGEAGHLAKDCRDDGGERGGGASCYSCGESGHLARDCLQK 145
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 14/53 (26%)
Frame = -3
Query: 476 ACYTCGGVGHMARVC---PSGRRGG-----------CYTCGGQGHMARDCQQK 360
+CY+CG GH+AR C SGR GG CYTCGG GHMARDC K
Sbjct: 128 SCYSCGESGHLARDCLQKSSGRSGGGERGSGGGGGACYTCGGVGHMARDCATK 180
>XP_013598422.1 PREDICTED: cold shock protein 1-like [Brassica oleracea var.
oleracea]
Length = 253
Score = 70.1 bits (170), Expect = 1e-11
Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-CYTCGGQGHMARDCQQK 360
GACYTCGGVGHMAR C + R+ G CY CGG GH+ARDC Q+
Sbjct: 188 GACYTCGGVGHMARDCATKRQSGTCYECGGTGHLARDCDQR 228
Score = 60.5 bits (145), Expect = 5e-08
Identities = 28/49 (57%), Positives = 28/49 (57%), Gaps = 9/49 (18%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP---------SGRRGGCYTCGGQGHMARDCQQK 360
G CYTCG GH AR C SG G CYTCGG GHMARDC K
Sbjct: 158 GGCYTCGEAGHFARDCVQKGNGGERGSGGGGACYTCGGVGHMARDCATK 206
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/45 (57%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC--PSGRRGG---CYTCGGQGHMARDCQQK 360
G CY CG GHMA+ C G RGG CY+CG GH+ARDC QK
Sbjct: 101 GGCYNCGEAGHMAKDCRDDGGERGGGASCYSCGESGHLARDCVQK 145
Score = 54.3 bits (129), Expect = 8e-06
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = -3
Query: 476 ACYTCGGVGHMARVC----PSGRR------GGCYTCGGQGHMARDCQQK 360
+CY+CG GH+AR C G R GGCYTCG GH ARDC QK
Sbjct: 128 SCYSCGESGHLARDCVQKSSGGERGGASGGGGCYTCGEAGHFARDCVQK 176
>XP_013748967.1 PREDICTED: cold shock protein 1 [Brassica napus]
Length = 258
Score = 70.1 bits (170), Expect = 2e-11
Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-CYTCGGQGHMARDCQQK 360
GACYTCGGVGHMAR C + R+ G CY CGG GH+ARDC Q+
Sbjct: 185 GACYTCGGVGHMARDCATKRQSGTCYECGGTGHLARDCDQR 225
Score = 58.5 bits (140), Expect = 3e-07
Identities = 27/51 (52%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC-----------PSGRRGGCYTCGGQGHMARDCQQK 360
G CYTCG GH AR C G G CYTCGG GHMARDC K
Sbjct: 153 GGCYTCGEAGHFARDCVQKGSGGGERGSGGGGGACYTCGGVGHMARDCATK 203
Score = 57.8 bits (138), Expect = 5e-07
Identities = 26/44 (59%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Frame = -3
Query: 476 ACYTCGGVGHMARVC-----PSGRRGGCYTCGGQGHMARDCQQK 360
+CY+CG GH+AR C S R GGCYTCG GH ARDC QK
Sbjct: 128 SCYSCGESGHLARDCLQKSSGSERGGGCYTCGEAGHFARDCVQK 171
Score = 57.0 bits (136), Expect = 9e-07
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC--PSGRRGG---CYTCGGQGHMARDCQQK 360
G CY CG GH+A+ C G RGG CY+CG GH+ARDC QK
Sbjct: 101 GGCYNCGEAGHLAKDCRDDGGERGGGASCYSCGESGHLARDCLQK 145
>XP_009138402.1 PREDICTED: cold shock protein 1 [Brassica rapa]
Length = 263
Score = 70.1 bits (170), Expect = 2e-11
Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-CYTCGGQGHMARDCQQK 360
GACYTCGGVGHMAR C + R+ G CY CGG GH+ARDC Q+
Sbjct: 190 GACYTCGGVGHMARDCATKRQSGTCYECGGTGHLARDCDQR 230
Score = 58.2 bits (139), Expect = 4e-07
Identities = 27/51 (52%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPS-----------GRRGGCYTCGGQGHMARDCQQK 360
G CYTCG GH AR C G G CYTCGG GHMARDC K
Sbjct: 158 GGCYTCGEAGHFARDCVQKGSGGGERGNGGGGGACYTCGGVGHMARDCATK 208
Score = 57.0 bits (136), Expect = 9e-07
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC--PSGRRGG---CYTCGGQGHMARDCQQK 360
G CY CG GH+A+ C G RGG CY+CG GH+ARDC QK
Sbjct: 101 GGCYNCGEAGHLAKDCRDDGGERGGGASCYSCGESGHLARDCVQK 145
Score = 54.3 bits (129), Expect = 8e-06
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = -3
Query: 476 ACYTCGGVGHMARVC----PSGRR------GGCYTCGGQGHMARDCQQK 360
+CY+CG GH+AR C G R GGCYTCG GH ARDC QK
Sbjct: 128 SCYSCGESGHLARDCVQKSSGGERGGASGGGGCYTCGEAGHFARDCVQK 176
>XP_009147904.1 PREDICTED: cold shock domain-containing protein 3-like [Brassica
rapa]
Length = 284
Score = 70.1 bits (170), Expect = 2e-11
Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRR---GGCYTCGGQGHMARDCQQK 360
GACYTCGG GHMAR CPS R+ GCY CGG GH+ARDC ++
Sbjct: 182 GACYTCGGSGHMARECPSKRQSGGSGCYECGGAGHLARDCDKR 224
Score = 62.0 bits (149), Expect = 2e-08
Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC-PSGRRGGCYTCGGQGHMARDCQQK 360
G CY CG GH+A+ C G RG CYTCG GH+ARDC QK
Sbjct: 98 GGCYNCGEAGHLAKDCRDGGERGACYTCGDTGHLARDCVQK 138
Score = 56.6 bits (135), Expect = 1e-06
Identities = 25/51 (49%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPS-----------GRRGGCYTCGGQGHMARDCQQK 360
G CY CG GH+AR C G G CYTCGG GHMAR+C K
Sbjct: 150 GGCYECGDTGHLARDCVKKSGGERVSGGGGGGGACYTCGGSGHMARECPSK 200
>XP_011099849.1 PREDICTED: cold shock domain-containing protein 3 [Sesamum indicum]
Length = 237
Score = 68.9 bits (167), Expect = 3e-11
Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-----CYTCGGQGHMARDCQQ 363
G CY CGG GHMAR CPSG RGG C+TCG GHMARDC +
Sbjct: 146 GGCYNCGGYGHMARECPSGSRGGGGGGACFTCGEPGHMARDCMR 189
Score = 57.4 bits (137), Expect = 6e-07
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSG-----RRGGCYTCGGQGHMARDC 369
G C+ CG GHMAR C +G GGCY CGG GHMAR+C
Sbjct: 120 GECFNCGEYGHMARDCNNGGGGGGNGGGCYNCGGYGHMAREC 161
>XP_010489426.1 PREDICTED: cold shock domain-containing protein 3 isoform X2
[Camelina sativa]
Length = 285
Score = 69.3 bits (168), Expect = 4e-11
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Frame = -3
Query: 473 CYTCGGVGHMARVC----PSGRRGGCYTCGGQGHMARDCQQK 360
CYTCGGVGH+ARVC PSG GGCY CG GHMARDC ++
Sbjct: 213 CYTCGGVGHIARVCTSKRPSGGAGGCYECGESGHMARDCDRR 254
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG----------CYTCGGQGHMARDCQQ 363
G CYTCG VGH+A+ C G R G CY CGG GH ARDC+Q
Sbjct: 153 GPCYTCGEVGHLAKDCRGGNRYGGGGRGSGSDECYLCGGVGHFARDCRQ 201
Score = 55.1 bits (131), Expect = 5e-06
Identities = 25/44 (56%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRRGG------CYTCGGQGHMARDCQQK 360
CY CGGVGH AR C GG CYTCGG GH+AR C K
Sbjct: 186 CYLCGGVGHFARDCRQNVGGGGGGGNTCYTCGGVGHIARVCTSK 229
Score = 54.7 bits (130), Expect = 7e-06
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-CYTCGGQGHMARDCQ 366
G CY CG VGH AR C GG CYTCG GH+A+DC+
Sbjct: 131 GECYKCGDVGHFARDCTRQSGGGPCYTCGEVGHLAKDCR 169
>XP_013616252.1 PREDICTED: cold shock domain-containing protein 3-like isoform X2
[Brassica oleracea var. oleracea]
Length = 106
Score = 65.9 bits (159), Expect = 4e-11
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRR------GGCYTCGGQGHMARDCQQK 360
CYTCGGVGHMARVC S R+ G CY CGG GH+ARDC ++
Sbjct: 33 CYTCGGVGHMARVCTSKRQSGGGGGGACYECGGIGHLARDCDRR 76
Score = 57.8 bits (138), Expect = 5e-08
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 8/45 (17%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-SGRRGG-------CYTCGGQGHMARDC 369
GACY CGG+GH+AR C GR GG C+TCG +GH ARDC
Sbjct: 58 GACYECGGIGHLARDCDRRGRVGGGGGGGGKCFTCGEEGHFARDC 102
>XP_013733372.1 PREDICTED: cold shock domain-containing protein 3-like [Brassica
napus] XP_013729768.1 PREDICTED: cold shock
domain-containing protein 3-like isoform X2 [Brassica
napus]
Length = 108
Score = 65.9 bits (159), Expect = 4e-11
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRR------GGCYTCGGQGHMARDCQQK 360
CYTCGGVGHMARVC S R+ G CY CGG GH+ARDC ++
Sbjct: 35 CYTCGGVGHMARVCTSKRQSGGGGGGACYECGGIGHLARDCDRR 78
Score = 57.8 bits (138), Expect = 5e-08
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 8/45 (17%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-SGRRGG-------CYTCGGQGHMARDC 369
GACY CGG+GH+AR C GR GG C+TCG +GH ARDC
Sbjct: 60 GACYECGGIGHLARDCDRRGRVGGGGGGGGKCFTCGEEGHFARDC 104
>XP_010489425.1 PREDICTED: cold shock domain-containing protein 3 isoform X1
[Camelina sativa]
Length = 295
Score = 69.3 bits (168), Expect = 4e-11
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 4/42 (9%)
Frame = -3
Query: 473 CYTCGGVGHMARVC----PSGRRGGCYTCGGQGHMARDCQQK 360
CYTCGGVGH+ARVC PSG GGCY CG GHMARDC ++
Sbjct: 223 CYTCGGVGHIARVCTSKRPSGGAGGCYECGESGHMARDCDRR 264
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG----------CYTCGGQGHMARDCQQ 363
G CYTCG VGH+A+ C G R G CY CGG GH ARDC+Q
Sbjct: 163 GPCYTCGEVGHLAKDCRGGNRYGGGGRGSGSDECYLCGGVGHFARDCRQ 211
Score = 55.1 bits (131), Expect = 5e-06
Identities = 25/44 (56%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRRGG------CYTCGGQGHMARDCQQK 360
CY CGGVGH AR C GG CYTCGG GH+AR C K
Sbjct: 196 CYLCGGVGHFARDCRQNVGGGGGGGNTCYTCGGVGHIARVCTSK 239
>CDX75546.1 BnaA01g01560D [Brassica napus]
Length = 213
Score = 68.2 bits (165), Expect = 4e-11
Identities = 31/48 (64%), Positives = 33/48 (68%), Gaps = 8/48 (16%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC---PSGRRGG-----CYTCGGQGHMARDCQQK 360
GACYTCG GH+AR C PSG RGG CYTCGG GHMAR+C K
Sbjct: 120 GACYTCGDTGHLARDCVQKPSGERGGGRGGVCYTCGGSGHMARECPSK 167
Score = 62.0 bits (149), Expect = 9e-09
Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC-PSGRRGGCYTCGGQGHMARDCQQK 360
G CY CG GH+A+ C G RG CYTCG GH+ARDC QK
Sbjct: 98 GGCYNCGEAGHLAKDCRDGGERGACYTCGDTGHLARDCVQK 138
>XP_013616250.1 PREDICTED: cold shock domain-containing protein 3-like isoform X1
[Brassica oleracea var. oleracea] XP_013616251.1
PREDICTED: cold shock domain-containing protein 3-like
isoform X1 [Brassica oleracea var. oleracea]
Length = 116
Score = 65.9 bits (159), Expect = 5e-11
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRR------GGCYTCGGQGHMARDCQQK 360
CYTCGGVGHMARVC S R+ G CY CGG GH+ARDC ++
Sbjct: 43 CYTCGGVGHMARVCTSKRQSGGGGGGACYECGGIGHLARDCDRR 86
Score = 57.8 bits (138), Expect = 6e-08
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 8/45 (17%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-SGRRGG-------CYTCGGQGHMARDC 369
GACY CGG+GH+AR C GR GG C+TCG +GH ARDC
Sbjct: 68 GACYECGGIGHLARDCDRRGRVGGGGGGGGKCFTCGEEGHFARDC 112
>XP_013729766.1 PREDICTED: cold shock domain-containing protein 3-like isoform X1
[Brassica napus] XP_013729767.1 PREDICTED: cold shock
domain-containing protein 3-like isoform X1 [Brassica
napus]
Length = 118
Score = 65.9 bits (159), Expect = 5e-11
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRR------GGCYTCGGQGHMARDCQQK 360
CYTCGGVGHMARVC S R+ G CY CGG GH+ARDC ++
Sbjct: 45 CYTCGGVGHMARVCTSKRQSGGGGGGACYECGGIGHLARDCDRR 88
Score = 57.8 bits (138), Expect = 7e-08
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 8/45 (17%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-SGRRGG-------CYTCGGQGHMARDC 369
GACY CGG+GH+AR C GR GG C+TCG +GH ARDC
Sbjct: 70 GACYECGGIGHLARDCDRRGRVGGGGGGGGKCFTCGEEGHFARDC 114
>XP_013643636.1 PREDICTED: cold shock domain-containing protein 3-like [Brassica
napus]
Length = 278
Score = 68.6 bits (166), Expect = 7e-11
Identities = 28/43 (65%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRR---GGCYTCGGQGHMARDCQQK 360
G CYTCGG GHMAR CPS R+ GCY CGG GH+ARDC ++
Sbjct: 176 GVCYTCGGSGHMARECPSKRQSGGSGCYECGGAGHLARDCDKR 218
Score = 62.4 bits (150), Expect = 1e-08
Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC---PSGRRGG-----CYTCGGQGHMARDCQQK 360
GACYTCG GH+AR C PSG RGG CY CG GH+ARDC +K
Sbjct: 120 GACYTCGDTGHLARDCVQKPSGERGGGRGGGCYECGDIGHLARDCVKK 167
Score = 62.0 bits (149), Expect = 2e-08
Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC-PSGRRGGCYTCGGQGHMARDCQQK 360
G CY CG GH+A+ C G RG CYTCG GH+ARDC QK
Sbjct: 98 GGCYNCGEAGHLAKDCRDGGERGACYTCGDTGHLARDCVQK 138
>XP_006412031.1 hypothetical protein EUTSA_v10026001mg [Eutrema salsugineum]
ESQ53484.1 hypothetical protein EUTSA_v10026001mg
[Eutrema salsugineum]
Length = 263
Score = 67.8 bits (164), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRR-GGCYTCGGQGHMARDCQQK 360
G CY CGG GHMAR CP+ R+ G CY CGG GHMARDC ++
Sbjct: 190 GVCYNCGGAGHMARDCPTKRQPGACYECGGTGHMARDCDRR 230
Score = 62.8 bits (151), Expect = 8e-09
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRG-----GCYTCGGQGHMARDCQQK 360
G+CY CG VGHMA+ C S RG GCYTCG GH ARDC QK
Sbjct: 98 GSCYHCGEVGHMAKDCSSSDRGDRSSGGCYTCGDTGHFARDCVQK 142
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/53 (50%), Positives = 27/53 (50%), Gaps = 13/53 (24%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC---------PSGRRGG----CYTCGGQGHMARDCQQK 360
G CYTCG GH AR C G RGG CY CG GH ARDC QK
Sbjct: 124 GGCYTCGDTGHFARDCVQKSSGNGGSGGERGGAGGECYNCGNTGHFARDCVQK 176
Score = 55.5 bits (132), Expect = 3e-06
Identities = 26/51 (50%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-----------SGRRGGCYTCGGQGHMARDCQQK 360
G CY CG GH AR C SG G CY CGG GHMARDC K
Sbjct: 158 GECYNCGNTGHFARDCVQKSVGNVGDRGSGGGGVCYNCGGAGHMARDCPTK 208
>ADE80751.1 cold shock domain protein 1 [Eutrema salsugineum]
Length = 263
Score = 67.8 bits (164), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRR-GGCYTCGGQGHMARDCQQK 360
G CY CGG GHMAR CP+ R+ G CY CGG GHMARDC ++
Sbjct: 190 GVCYNCGGAGHMARDCPTKRQPGACYECGGTGHMARDCDRR 230
Score = 62.8 bits (151), Expect = 8e-09
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRG-----GCYTCGGQGHMARDCQQK 360
G+CY CG VGHMA+ C S RG GCYTCG GH ARDC QK
Sbjct: 98 GSCYHCGEVGHMAKDCSSSDRGDRSSGGCYTCGDTGHFARDCVQK 142
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/53 (50%), Positives = 27/53 (50%), Gaps = 13/53 (24%)
Frame = -3
Query: 479 GACYTCGGVGHMARVC---------PSGRRGG----CYTCGGQGHMARDCQQK 360
G CYTCG GH AR C G RGG CY CG GH ARDC QK
Sbjct: 124 GGCYTCGDTGHFARDCVQKSSGNGGSGGERGGAGGECYNCGNTGHFARDCVQK 176
Score = 55.5 bits (132), Expect = 3e-06
Identities = 26/51 (50%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-----------SGRRGGCYTCGGQGHMARDCQQK 360
G CY CG GH AR C SG G CY CGG GHMARDC K
Sbjct: 158 GECYNCGNTGHFARDCVQKSVGNVGDRGSGGGGVCYNCGGAGHMARDCPTK 208
>KFK40166.1 hypothetical protein AALP_AA3G339200 [Arabis alpina]
Length = 268
Score = 67.8 bits (164), Expect = 1e-10
Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRR-----GGCYTCGGQGHMARDCQQ 363
CYTCGGVGHMARVC S R+ GGCY CGG GH+ARDC +
Sbjct: 196 CYTCGGVGHMARVCTSKRQSGAGGGGCYECGGIGHLARDCDR 237
Score = 57.4 bits (137), Expect = 7e-07
Identities = 27/54 (50%), Positives = 28/54 (51%), Gaps = 15/54 (27%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRG---------------GCYTCGGQGHMARDCQQ 363
GACY CG VGHMA+ C G G GCYTCG GH ARDC Q
Sbjct: 128 GACYNCGEVGHMAKDCVGGGGGGGNRYGGGGRGSGGDGCYTCGDPGHFARDCMQ 181
Score = 55.1 bits (131), Expect = 5e-06
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCPSGRRGG-------CYTCGGQGHMARDC 369
G CY CGG+GH+AR C G GG C+ CG +GH AR+C
Sbjct: 220 GGCYECGGIGHLARDCDRGGSGGGGGGSGKCFKCGEEGHFAREC 263
>CDY35705.1 BnaC02g09710D [Brassica napus]
Length = 158
Score = 65.9 bits (159), Expect = 1e-10
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 6/44 (13%)
Frame = -3
Query: 473 CYTCGGVGHMARVCPSGRR------GGCYTCGGQGHMARDCQQK 360
CYTCGGVGHMARVC S R+ G CY CGG GH+ARDC ++
Sbjct: 85 CYTCGGVGHMARVCTSKRQSGGGGGGACYECGGIGHLARDCDRR 128
Score = 57.8 bits (138), Expect = 1e-07
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 8/45 (17%)
Frame = -3
Query: 479 GACYTCGGVGHMARVCP-SGRRGG-------CYTCGGQGHMARDC 369
GACY CGG+GH+AR C GR GG C+TCG +GH ARDC
Sbjct: 110 GACYECGGIGHLARDCDRRGRVGGGGGGGGKCFTCGEEGHFARDC 154