BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00040459
         (302 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW63130.1 31 kDa putative protein [Strawberry latent ringspot v...    80   6e-16
NP_620833.1 36 kDa protein [Strawberry latent ringspot virus sat...    77   1e-14

>AAW63130.1 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score = 80.1 bits (196), Expect = 6e-16
 Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
 Frame = +2

Query: 14  LRNPTAAGGSSRRERPQKAVTKQPVVRPIRAP--VKVENRFSPLCVEE----SLVAPKKS 175
           +R P AAGG+ RRERP     K   VRPIR P  VK  NRF+PL V+E    ++ AP   
Sbjct: 49  VRAPIAAGGNFRRERPLVVSHKTQQVRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINP 108

Query: 176 KLTYADVVR--AKVSPAKAKKGVVTLIETSKDFKLFED 283
           K +YAD +R  A V P+  +KGVVTL+ET KDF LF D
Sbjct: 109 KKSYADALRSSAFVKPS-VRKGVVTLVETEKDFALFGD 145


>NP_620833.1 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           pir||JQ2018 hypothetical 36.5K protein - strawberry
           latent ringspot virus [Strawberry latent ringspot virus]
           CAA49480.1 36 kDa protein [Strawberry latent ringspot
           virus satellite RNA]
          Length = 331

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 53/98 (54%), Positives = 61/98 (62%), Gaps = 8/98 (8%)
 Frame = +2

Query: 14  LRNPTAAGGSSRRERPQKAVTKQPVVRPIRAP--VKVENRFSPLCVEE---SLVAP-KKS 175
           +R P AAGGS RRERP     K   VRPIR P  VK  NRF+ L V+E     VAP    
Sbjct: 49  VRAPIAAGGSFRRERPPVVSHKTQQVRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPK 108

Query: 176 KLTYADVVR--AKVSPAKAKKGVVTLIETSKDFKLFED 283
           K +YAD +R  A V P+ A+KGVVTL+ET KDF LF D
Sbjct: 109 KKSYADALRSSAFVKPS-ARKGVVTLVETEKDFALFCD 145