BLASTX nr result
ID: Lithospermum23_contig00039876
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00039876
(202 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU30601.1 Retrovirus-related Pol polyprotein from transposon TN... 63 2e-11
XP_018467767.1 PREDICTED: uncharacterized protein LOC108839510 [... 63 6e-10
XP_018453786.1 PREDICTED: uncharacterized protein LOC108824918 [... 63 6e-10
KYP64905.1 Retrovirus-related Pol polyprotein from transposon TN... 62 1e-09
KYP61781.1 Retrovirus-related Pol polyprotein from transposon TN... 62 1e-09
XP_010412990.1 PREDICTED: uncharacterized protein LOC104699374 [... 62 1e-09
XP_010436765.1 PREDICTED: uncharacterized protein LOC104720575 [... 61 2e-09
AAD23883.1 putative retroelement pol polyprotein [Arabidopsis th... 61 3e-09
AAD24600.1 putative retroelement pol polyprotein [Arabidopsis th... 60 4e-09
OMO87828.1 Integrase, catalytic core [Corchorus capsularis] 60 7e-09
XP_018458822.1 PREDICTED: uncharacterized protein LOC108829717 [... 59 1e-08
XP_010677195.1 PREDICTED: uncharacterized protein LOC104892872 [... 59 1e-08
XP_010463099.1 PREDICTED: uncharacterized protein LOC104743749 [... 59 1e-08
KYP43576.1 Retrovirus-related Pol polyprotein from transposon TN... 59 2e-08
BAB10743.1 retroelement pol polyprotein-like [Arabidopsis thaliana] 58 3e-08
AAG50751.1 polyprotein, putative [Arabidopsis thaliana] 58 3e-08
XP_010683416.1 PREDICTED: uncharacterized protein LOC104898103 [... 58 4e-08
XP_019227222.1 PREDICTED: uncharacterized protein LOC109208553 [... 58 4e-08
KYP64173.1 Retrovirus-related Pol polyprotein from transposon TN... 58 4e-08
XP_013713284.1 PREDICTED: uncharacterized protein LOC106416957 [... 58 4e-08
>JAU30601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 86
Score = 62.8 bits (151), Expect = 2e-11
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC +AKQ R SFP K LIHCD+WGP SS+G RYFLTIVD
Sbjct: 7 VCLRAKQTRVSFPSSINKTTTIFELIHCDLWGPYRTPSSSGARYFLTIVD 56
>XP_018467767.1 PREDICTED: uncharacterized protein LOC108839510 [Raphanus sativus]
Length = 627
Score = 62.8 bits (151), Expect = 6e-10
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+CFKAKQ R+SFP K +LIHCD+WGP SS G +YFLTIVD
Sbjct: 548 ICFKAKQTRSSFPESLNKASAPFDLIHCDVWGPYRTPSSCGAKYFLTIVD 597
>XP_018453786.1 PREDICTED: uncharacterized protein LOC108824918 [Raphanus sativus]
Length = 960
Score = 62.8 bits (151), Expect = 6e-10
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+CFKAKQ R+SFP K +LIHCD+WGP SS G +YFLTIVD
Sbjct: 548 ICFKAKQTRSSFPESLNKASAPFDLIHCDVWGPYRTPSSCGAKYFLTIVD 597
>KYP64905.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 651
Score = 62.0 bits (149), Expect = 1e-09
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC +AKQ R SFP+ K +V LIHCD+WGP S G RYFLTIVD
Sbjct: 51 VCLRAKQCRESFPISINKTMVIFQLIHCDLWGPYRTISHCGARYFLTIVD 100
>KYP61781.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1413
Score = 62.0 bits (149), Expect = 1e-09
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC +AKQ R SFP+ K +V LIHCD+WGP S G RYFLTIVD
Sbjct: 502 VCLRAKQCRESFPISINKTMVIFQLIHCDLWGPYRTISHCGARYFLTIVD 551
>XP_010412990.1 PREDICTED: uncharacterized protein LOC104699374 [Camelina sativa]
Length = 1511
Score = 62.0 bits (149), Expect = 1e-09
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC +AKQ R SFPL K + LIHCD+WGP +S +G +YFLTIVD
Sbjct: 567 VCLRAKQTRQSFPLSLNKTVRIFELIHCDLWGPYRTTSHSGAKYFLTIVD 616
>XP_010436765.1 PREDICTED: uncharacterized protein LOC104720575 [Camelina sativa]
Length = 282
Score = 61.2 bits (147), Expect = 2e-09
Identities = 30/50 (60%), Positives = 33/50 (66%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VCF+AKQ R FPL K +LIHCD+WGP V SS G YFLTIVD
Sbjct: 183 VCFRAKQTRDVFPLSSNKSTECFSLIHCDVWGPYRVPSSYGAVYFLTIVD 232
>AAD23883.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 60.8 bits (146), Expect = 3e-09
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VCF+AKQ R FP+ K + +LIHCD+WGP V SS G YFLTIVD
Sbjct: 123 VCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVD 172
>AAD24600.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 60.5 bits (145), Expect = 4e-09
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC +AKQ R SFPL K L LI+CD+WGP S G RYFLTI+D
Sbjct: 425 VCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARYFLTIID 474
>OMO87828.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1297
Score = 59.7 bits (143), Expect = 7e-09
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +3
Query: 48 CFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
C +AKQ R F + IK + Y +LIHCDIWG +SS+G YFLTIVD
Sbjct: 489 CLRAKQTRLPFSISGIKSVSYFDLIHCDIWGGYKTASSSGAHYFLTIVD 537
>XP_018458822.1 PREDICTED: uncharacterized protein LOC108829717 [Raphanus sativus]
Length = 692
Score = 59.3 bits (142), Expect = 1e-08
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+CF+AKQ R+ FP K L +LIHCDIWGP SS G YFLTIVD
Sbjct: 547 ICFRAKQTRSVFPDSSNKALEPFSLIHCDIWGPYRTLSSCGATYFLTIVD 596
>XP_010677195.1 PREDICTED: uncharacterized protein LOC104892872 [Beta vulgaris
subsp. vulgaris]
Length = 897
Score = 58.9 bits (141), Expect = 1e-08
Identities = 30/50 (60%), Positives = 32/50 (64%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC AKQ R SFPL K LIHCD+WGP SV SS G YFLT+VD
Sbjct: 502 VCPMAKQTRDSFPLSTHKATRLFELIHCDLWGPYSVPSSCGAIYFLTLVD 551
>XP_010463099.1 PREDICTED: uncharacterized protein LOC104743749 [Camelina sativa]
Length = 1164
Score = 58.9 bits (141), Expect = 1e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VCF+AKQ R FP K ++IHCD+WGP VSSS G YFLT+VD
Sbjct: 459 VCFRAKQTRAVFPDSLNKTTDCFSMIHCDVWGPYRVSSSCGAIYFLTVVD 508
>KYP43576.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 289
Score = 58.5 bits (140), Expect = 2e-08
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+C +AKQ R SF + K + LIHCD+WGP + NG RYFLTIVD
Sbjct: 79 ICLRAKQSRESFSISENKSMDIFQLIHCDLWGPYRTPAFNGARYFLTIVD 128
>BAB10743.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 58.2 bits (139), Expect = 3e-08
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +3
Query: 48 CFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
C +AKQ R +FPL + + LIHCD+WGP S +G RYFLTIVD
Sbjct: 326 CMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGARYFLTIVD 374
>AAG50751.1 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 58.2 bits (139), Expect = 3e-08
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +3
Query: 48 CFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
C +AKQ R +FPL + + LIHCD+WGP S +G RYFLTIVD
Sbjct: 550 CMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVD 598
>XP_010683416.1 PREDICTED: uncharacterized protein LOC104898103 [Beta vulgaris
subsp. vulgaris]
Length = 654
Score = 57.8 bits (138), Expect = 4e-08
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+CF A+ PR FP+ K IHCD+WGP +SS G RYFLTIVD
Sbjct: 544 ICFYAQHPRDQFPISDTKTTRIFEKIHCDLWGPYRHASSCGARYFLTIVD 593
>XP_019227222.1 PREDICTED: uncharacterized protein LOC109208553 [Nicotiana
attenuata]
Length = 791
Score = 57.8 bits (138), Expect = 4e-08
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+C KA+Q RTSFPL IK LIH D+WG V++ NG +YFLTIVD
Sbjct: 475 ICPKARQTRTSFPLSQIKTKKPFELIHVDVWGLYKVATYNGFKYFLTIVD 524
>KYP64173.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 814
Score = 57.8 bits (138), Expect = 4e-08
Identities = 29/50 (58%), Positives = 31/50 (62%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
VC +AKQ R SFPL K LIHCD+WGP SS G YFLTIVD
Sbjct: 485 VCQRAKQTRESFPLSNRKASSSFELIHCDLWGPYRTPSSCGAYYFLTIVD 534
>XP_013713284.1 PREDICTED: uncharacterized protein LOC106416957 [Brassica napus]
Length = 852
Score = 57.8 bits (138), Expect = 4e-08
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +3
Query: 45 VCFKAKQPRTSFPLI*IKLLVYLNLIHCDIWGPVSVSSSNGTRYFLTIVD 194
+CF++KQ R SFP K +LIHCD+WGP ++ G+RYFLTI+D
Sbjct: 525 ICFRSKQTRDSFPNSLNKAKEIFDLIHCDLWGPYRTTTICGSRYFLTIID 574