BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00039553
         (478 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACO35888.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   148   2e-42
ABC17790.1 plastid ribulose-1,5-bisphosphate carboxylase/oxygena...   144   1e-41
WP_075678368.1 hypothetical protein, partial [Stenotrophomonas s...   144   2e-41
AIB04188.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   145   2e-41
WP_039311073.1 ribulose bisphosphate carboxylase small subunit [...   143   2e-41
AAK16227.1 ribulose-1,5-bisphosphate carboxylase small subunit R...   143   3e-41
Q40250.1 RecName: Full=Ribulose bisphosphate carboxylase small c...   145   3e-41
CAD11990.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   144   5e-41
WP_049797987.1 ribulose bisphosphate carboxylase small subunit [...   140   8e-41
ABK15574.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   143   1e-40
ALJ30132.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   143   1e-40
ALJ30131.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   143   1e-40
AAK16228.1 ribulose-1,5-bisphosphate carboxylase small subunit R...   141   2e-40
CDP20139.1 unnamed protein product [Coffea canephora]                 142   3e-40
AAK49590.1 F1O19.10/F1O19.10 [Arabidopsis thaliana]                   140   3e-40
Q39748.1 RecName: Full=Ribulose bisphosphate carboxylase small c...   142   3e-40
ABS57004.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   140   3e-40
Q39744.1 RecName: Full=Ribulose bisphosphate carboxylase small c...   142   3e-40
XP_010693054.1 PREDICTED: ribulose bisphosphate carboxylase smal...   142   3e-40
AAF19793.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small...   142   4e-40

>ACO35888.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
           partial [Ageratina adenophora]
          Length = 178

 Score =  148 bits (373), Expect = 2e-42
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREHARSPGYYDGR+WTMWKLPMFGCTDS QV+KEVGEC KEYP A++RII
Sbjct: 98  EFELEHGFVYREHARSPGYYDGRHWTMWKLPMFGCTDSAQVLKEVGECKKEYPQAWIRII 157

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIA+KP  Y
Sbjct: 158 GFDNVRQVQCISFIASKPDGY 178


>ABC17790.1 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17791.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17792.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17793.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17794.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17795.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17796.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17797.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17798.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17799.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17800.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica] ABC17801.1 plastid
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial [Coffea arabica]
          Length = 117

 Score =  144 bits (362), Expect = 1e-41
 Identities = 64/79 (81%), Positives = 71/79 (89%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ RSPGYYDGRYWTMWKLPM+GCTD+ QV+ EVGECLKEYP+ +VRII
Sbjct: 38  EFELEKGFVYREYHRSPGYYDGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNCWVRII 97

Query: 182 GFDNVRQVQCISFIAAKPK 238
           GFDNVRQVQCISFIAAKPK
Sbjct: 98  GFDNVRQVQCISFIAAKPK 116


>WP_075678368.1 hypothetical protein, partial [Stenotrophomonas sp. TD3]
          Length = 124

 Score =  144 bits (362), Expect = 2e-41
 Identities = 62/78 (79%), Positives = 69/78 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREH  SPGYYDGRYWTMWKLPMFGCTDS QV+KE+GEC KEYP+AF+R+I
Sbjct: 43  EFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEIGECKKEYPNAFIRVI 102

Query: 182 GFDNVRQVQCISFIAAKP 235
           GFDNVRQVQCISFI +KP
Sbjct: 103 GFDNVRQVQCISFIVSKP 120


>AIB04188.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Camellia oleifera]
          Length = 176

 Score =  145 bits (366), Expect = 2e-41
 Identities = 66/81 (81%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E SV GGFVYREH +SPGYYDGRYWTMWKLPMFGCTDS QV+KEV EC KEYP AF+RII
Sbjct: 96  EFSVVGGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQAFIRII 155

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDN RQVQCISFIA KP  +
Sbjct: 156 GFDNKRQVQCISFIACKPPGF 176


>WP_039311073.1 ribulose bisphosphate carboxylase small subunit [Paenibacillus sp.
           IHB B 3415] KHL91154.1 hypothetical protein QW71_36295
           [Paenibacillus sp. IHB B 3415]
          Length = 123

 Score =  143 bits (361), Expect = 2e-41
 Identities = 64/81 (79%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E SV+GGFVYREH +SPGYYDGRYWTMWKLPMFGCTDS QV+KEV EC KEYP +F+RII
Sbjct: 43  EFSVQGGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQSFIRII 102

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDN RQVQCISFI  KP  +
Sbjct: 103 GFDNKRQVQCISFICYKPPGF 123


>AAK16227.1 ribulose-1,5-bisphosphate carboxylase small subunit R1, partial
           [Flaveria ramosissima]
          Length = 131

 Score =  143 bits (361), Expect = 3e-41
 Identities = 64/81 (79%), Positives = 71/81 (87%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ RSPGYYDGRYWTMWKLPMFGCTDS QV+KE+GEC KEYP A++RII
Sbjct: 51  EFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVMKELGECKKEYPQAWIRII 110

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIA+KP  Y
Sbjct: 111 GFDNVRQVQCISFIASKPDGY 131


>Q40250.1 RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor BAA03103.1 riburose-1,5-bisphosphate
           carboxylase/oxygenase small subunit precursor [Lactuca
           sativa] ALV82124.1 ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit [Lactuca
           dolichophylla]
          Length = 181

 Score =  145 bits (365), Expect = 3e-41
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREH  SPGYYDGRYWTMWKLPMFGCTDS QV+KEVGEC KEYP+AF+R+I
Sbjct: 100 EFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVI 159

Query: 182 GFDNVRQVQCISFIAAKP 235
           GFDN+RQVQCISFI AKP
Sbjct: 160 GFDNIRQVQCISFIVAKP 177


>CAD11990.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Coffea arabica] CAD11991.1 ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit [Coffea arabica]
          Length = 181

 Score =  144 bits (364), Expect = 5e-41
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ RSPGYYDGRYWTMWKLPM+GCTD+ QV+ EVGECLKEYP+ +VRII
Sbjct: 101 EFELEKGFVYREYHRSPGYYDGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNCWVRII 160

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIAAKPK +
Sbjct: 161 GFDNVRQVQCISFIAAKPKGF 181


>WP_049797987.1 ribulose bisphosphate carboxylase small subunit [Vibrio vulnificus]
          Length = 85

 Score =  140 bits (354), Expect = 8e-41
 Identities = 62/73 (84%), Positives = 67/73 (91%)
 Frame = +2

Query: 20  GFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRIIGFDNVR 199
           GFVYREH RSPGYYDGRYWTMWKLPMFGCTD++QV KEV EC KE+P+ F+RIIGFDNVR
Sbjct: 7   GFVYREHHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECRKEHPEKFIRIIGFDNVR 66

Query: 200 QVQCISFIAAKPK 238
           QVQCISFIA KPK
Sbjct: 67  QVQCISFIAYKPK 79


>ABK15574.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Camellia sinensis]
          Length = 176

 Score =  143 bits (361), Expect = 1e-40
 Identities = 64/81 (79%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E SV+GGFVYREH +SPGYYDGRYWTMWKLPMFGCTDS QV+KEV EC KEYP +F+RII
Sbjct: 96  EFSVQGGFVYREHNKSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQSFIRII 155

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDN RQVQCISFI  KP  +
Sbjct: 156 GFDNKRQVQCISFICYKPPGF 176


>ALJ30132.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Tragopogon pratensis]
          Length = 179

 Score =  143 bits (361), Expect = 1e-40
 Identities = 64/81 (79%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREH  SPGYYDGRYWTMWKLPMFGCTDS QV+KE+ EC KEYP+AFVRII
Sbjct: 99  EFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFVRII 158

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQC+SFIAAKP  +
Sbjct: 159 GFDNVRQVQCVSFIAAKPPGF 179


>ALJ30131.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Tragopogon dubius]
          Length = 179

 Score =  143 bits (361), Expect = 1e-40
 Identities = 64/81 (79%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREH  SPGYYDGRYWTMWKLPMFGCTDS QV+KE+ EC KEYP+AFVRII
Sbjct: 99  EFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFVRII 158

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQC+SFIAAKP  +
Sbjct: 159 GFDNVRQVQCVSFIAAKPPGF 179


>AAK16228.1 ribulose-1,5-bisphosphate carboxylase small subunit R2, partial
           [Flaveria ramosissima]
          Length = 131

 Score =  141 bits (356), Expect = 2e-40
 Identities = 63/81 (77%), Positives = 71/81 (87%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ARSPGYYDGRYWTMWKLPMFGCTDS QV+KE+ EC KEYP A++RII
Sbjct: 51  EFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRII 110

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIA+KP  +
Sbjct: 111 GFDNVRQVQCISFIASKPDGF 131


>CDP20139.1 unnamed protein product [Coffea canephora]
          Length = 158

 Score =  142 bits (357), Expect = 3e-40
 Identities = 64/81 (79%), Positives = 71/81 (87%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  G VYRE+ RSPGYYDGRYWTMWKLPMFGCTD+ QV+KEV ECLKEYP+ +VRII
Sbjct: 78  EFELEKGHVYREYHRSPGYYDGRYWTMWKLPMFGCTDATQVLKEVRECLKEYPNCWVRII 137

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIAAKPK +
Sbjct: 138 GFDNVRQVQCISFIAAKPKGF 158


>AAK49590.1 F1O19.10/F1O19.10 [Arabidopsis thaliana]
          Length = 125

 Score =  140 bits (354), Expect = 3e-40
 Identities = 62/81 (76%), Positives = 68/81 (83%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREH  SPGYYDGRYWTMWKLP+FGCTDS QV+KEV EC KEYP+AF+RII
Sbjct: 43  EFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRII 102

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDN RQVQCISFIA KP  +
Sbjct: 103 GFDNTRQVQCISFIAYKPPSF 123


>Q39748.1 RecName: Full=Ribulose bisphosphate carboxylase small chain 6,
           chloroplastic; Short=RuBisCO small subunit 6; Flags:
           Precursor AAB67850.1 ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit protein [Flaveria
           pringlei]
          Length = 173

 Score =  142 bits (358), Expect = 3e-40
 Identities = 63/81 (77%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ARSPGYYDGRYWTMWKLPMFGCTDS+QV+KE+ EC KEYP A++RII
Sbjct: 93  EFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRII 152

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIA+KP  +
Sbjct: 153 GFDNVRQVQCISFIASKPDXF 173


>ABS57004.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [synthetic construct]
          Length = 129

 Score =  140 bits (354), Expect = 3e-40
 Identities = 62/81 (76%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ARSPGYYDGRYWTMWKLPMFGCTDS QV+KE+ EC KEYP A++RII
Sbjct: 43  EFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRII 102

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCI FIA++P  Y
Sbjct: 103 GFDNVRQVQCIMFIASRPDGY 123


>Q39744.1 RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
           chloroplastic; Short=RuBisCO small subunit 2; Flags:
           Precursor AAB67846.1 ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit protein [Flaveria
           pringlei]
          Length = 178

 Score =  142 bits (358), Expect = 3e-40
 Identities = 63/81 (77%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYRE+ARSPGYYDGRYWTMWKLPMFGCTDS QV+KE+ EC KEYP A++RII
Sbjct: 98  EFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRII 157

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDNVRQVQCISFIA+KP+ +
Sbjct: 158 GFDNVRQVQCISFIASKPEGF 178


>XP_010693054.1 PREDICTED: ribulose bisphosphate carboxylase small chain [Beta
           vulgaris subsp. vulgaris] KMT18547.1 hypothetical
           protein BVRB_2g026810 [Beta vulgaris subsp. vulgaris]
          Length = 179

 Score =  142 bits (358), Expect = 3e-40
 Identities = 66/81 (81%), Positives = 67/81 (82%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  V+ GFVYREH  SPGYYDGRYWTMWKLPMFGCTD  QVV EV E  K YPDAFVRII
Sbjct: 99  EFEVKDGFVYREHNNSPGYYDGRYWTMWKLPMFGCTDPAQVVNEVEEVKKAYPDAFVRII 158

Query: 182 GFDNVRQVQCISFIAAKPKDY 244
           GFDN RQVQCISFIA KPKDY
Sbjct: 159 GFDNKRQVQCISFIAYKPKDY 179


>AAF19793.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Lactuca sativa]
          Length = 181

 Score =  142 bits (358), Expect = 4e-40
 Identities = 62/78 (79%), Positives = 69/78 (88%)
 Frame = +2

Query: 2   ECSVRGGFVYREHARSPGYYDGRYWTMWKLPMFGCTDSLQVVKEVGECLKEYPDAFVRII 181
           E  +  GFVYREH  SPGYYDGRYWTMWKLPMFGCTDS QV+KEVGEC KEYP+AF+R+I
Sbjct: 100 EFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVI 159

Query: 182 GFDNVRQVQCISFIAAKP 235
           GFD+VRQVQCISFI +KP
Sbjct: 160 GFDSVRQVQCISFIVSKP 177