BLASTX nr result

ID: Lithospermum23_contig00039225 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00039225
         (319 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP00201.1 unnamed protein product [Coffea canephora]                  47   2e-06
XP_011086506.1 PREDICTED: protein LSM12 homolog A [Sesamum indicum]    48   3e-06

>CDP00201.1 unnamed protein product [Coffea canephora]
          Length = 188

 Score = 47.0 bits (110), Expect(2) = 2e-06
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -1

Query: 205 PKRNIRLLKVNYIKEFTFLGQG 140
           PKRNIRLLK NYIKEFTFLGQG
Sbjct: 59  PKRNIRLLKANYIKEFTFLGQG 80



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -3

Query: 137 CFVDLNVLQAREDSAKR 87
           CF+DLN LQAREDSA R
Sbjct: 89  CFIDLNNLQAREDSAIR 105


>XP_011086506.1 PREDICTED: protein LSM12 homolog A [Sesamum indicum]
          Length = 181

 Score = 47.8 bits (112), Expect(2) = 3e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -1

Query: 208 GPKRNIRLLKVNYIKEFTFLGQG 140
           GPKRNIRLLK NYIKEF+FLGQG
Sbjct: 51  GPKRNIRLLKANYIKEFSFLGQG 73



 Score = 30.4 bits (67), Expect(2) = 3e-06
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 137 CFVDLNVLQAREDSAKR 87
           CF+DLN LQARE+SA R
Sbjct: 82  CFLDLNTLQAREESAIR 98


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