BLASTX nr result
ID: Lithospermum23_contig00038887
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00038887
(337 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AMX23215.1 Ycf2 (chloroplast) [Solanum melongena] 91 7e-19
AAD19611.1 YCF2 protein, partial (chloroplast) [Prunus dulcis] 85 8e-19
ABD16780.1 probable ATPase, partial (chloroplast) [Eucalyptus ci... 88 9e-19
YP_009033929.1 hypothetical chloroplast RF2 (plastid) [Dioscorea... 90 1e-18
YP_001294396.1 hypothetical chloroplast RF2 [Dioscorea elephanti... 90 1e-18
AKJ77587.1 Ycf2 (chloroplast) [Dioscorea nipponica] AKJ77606.1 Y... 90 1e-18
YP_009139145.1 hypothetical chloroplast RF2 (chloroplast) [Diosc... 90 1e-18
ANP26149.1 hypothetical chloroplast RF21 (plastid) [Tacca chantr... 90 1e-18
AKR80622.1 hypothetical chloroplast RF21, partial (plastid) [Sar... 90 1e-18
YP_009130171.1 hypothetical chloroplast RF21 (chloroplast) [Carl... 90 1e-18
AKR81134.1 hypothetical chloroplast RF21 (plastid) [Freycinetia ... 90 1e-18
AKR81266.1 hypothetical chloroplast RF21 (plastid) [Cyclanthus b... 90 1e-18
YP_009254119.1 Ycf2 (plastid) [Solanum melongena] YP_009254139.1... 89 2e-18
YP_009171910.1 Ycf2 (chloroplast) [Solanum nigrum] YP_009171930.... 89 2e-18
ABD16783.1 probable ATPase, partial (chloroplast) [Fuchsia hybri... 87 3e-18
AMZ03480.1 Ycf2 (chloroplast) [Bienertia sinuspersici] AMZ03498.... 89 3e-18
YP_009143850.1 ycf2 protein (chloroplast) [Salicornia bigelovii]... 89 3e-18
YP_009143766.1 ycf2 protein (chloroplast) [Salicornia europaea] ... 89 3e-18
YP_009143682.1 ycf2 protein (chloroplast) [Salicornia brachiata]... 89 3e-18
YP_009129475.1 conserved hypothetical protein ycf2 (chloroplast)... 89 3e-18
>AMX23215.1 Ycf2 (chloroplast) [Solanum melongena]
Length = 2280
Score = 90.5 bits (223), Expect = 7e-19
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1881 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCNGG 1930
>AAD19611.1 YCF2 protein, partial (chloroplast) [Prunus dulcis]
Length = 135
Score = 84.7 bits (208), Expect = 8e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NC IDPISIYMKKK
Sbjct: 73 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDPISIYMKKK 117
>ABD16780.1 probable ATPase, partial (chloroplast) [Eucalyptus cinerea]
Length = 269
Score = 87.8 bits (216), Expect = 9e-19
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK
Sbjct: 202 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKK 246
>YP_009033929.1 hypothetical chloroplast RF2 (plastid) [Dioscorea rotundata]
YP_009033946.1 hypothetical chloroplast RF2 (plastid)
[Dioscorea rotundata] AHZ18174.1 hypothetical chloroplast
RF2 (plastid) [Dioscorea rotundata] AHZ18191.1
hypothetical chloroplast RF2 (plastid) [Dioscorea
rotundata]
Length = 2258
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK R G
Sbjct: 1850 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSRKEG 1899
>YP_001294396.1 hypothetical chloroplast RF2 [Dioscorea elephantipes] YP_001294415.1
hypothetical chloroplast RF2 [Dioscorea elephantipes]
A6MMQ1.1 RecName: Full=Protein Ycf2 ABR01473.1
hypothetical chloroplast RF2 (chloroplast) [Dioscorea
elephantipes] ABR01492.1 hypothetical chloroplast RF2
(chloroplast) [Dioscorea elephantipes]
Length = 2260
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK R G
Sbjct: 1850 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSRKEG 1899
>AKJ77587.1 Ycf2 (chloroplast) [Dioscorea nipponica] AKJ77606.1 Ycf2
(chloroplast) [Dioscorea nipponica]
Length = 2260
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK R G
Sbjct: 1852 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSRKEG 1901
>YP_009139145.1 hypothetical chloroplast RF2 (chloroplast) [Dioscorea zingiberensis]
YP_009139164.1 hypothetical chloroplast RF2 (chloroplast)
[Dioscorea zingiberensis] AKF33605.1 hypothetical
chloroplast RF2 (chloroplast) [Dioscorea zingiberensis]
AKF33606.1 hypothetical chloroplast RF2 (chloroplast)
[Dioscorea zingiberensis]
Length = 2260
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK R G
Sbjct: 1852 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSRKEG 1901
>ANP26149.1 hypothetical chloroplast RF21 (plastid) [Tacca chantrieri] ANP26170.1
hypothetical chloroplast RF21 (plastid) [Tacca
chantrieri]
Length = 2276
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK R G
Sbjct: 1872 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSRKEG 1921
>AKR80622.1 hypothetical chloroplast RF21, partial (plastid) [Sararanga sinuosa]
Length = 2297
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1895 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCKGG 1944
>YP_009130171.1 hypothetical chloroplast RF21 (chloroplast) [Carludovica palmata]
YP_009130188.1 hypothetical chloroplast RF21
(chloroplast) [Carludovica palmata] AJV88640.1
hypothetical chloroplast RF21 (chloroplast) [Carludovica
palmata] AJV88658.1 hypothetical chloroplast RF21
(chloroplast) [Carludovica palmata]
Length = 2297
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1893 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCKGG 1942
>AKR81134.1 hypothetical chloroplast RF21 (plastid) [Freycinetia banksii]
Length = 2300
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1892 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCKGG 1941
>AKR81266.1 hypothetical chloroplast RF21 (plastid) [Cyclanthus bipartitus]
Length = 2306
Score = 89.7 bits (221), Expect = 1e-18
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1897 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCKGG 1946
>YP_009254119.1 Ycf2 (plastid) [Solanum melongena] YP_009254139.1 Ycf2 (plastid)
[Solanum melongena] ANC62805.1 Ycf2 (plastid) [Solanum
melongena] ANC62825.1 Ycf2 (plastid) [Solanum melongena]
Length = 2280
Score = 89.0 bits (219), Expect = 2e-18
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPI+PISIYMKKK GG
Sbjct: 1881 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCPIEPISIYMKKKSCNGG 1930
>YP_009171910.1 Ycf2 (chloroplast) [Solanum nigrum] YP_009171930.1 Ycf2 (chloroplast)
[Solanum nigrum] AKM21987.1 Ycf2 (chloroplast) [Solanum
nigrum] AKM22007.1 Ycf2 (chloroplast) [Solanum nigrum]
ALI31184.1 Ycf2 (chloroplast) [Solanum nigrum]
Length = 2280
Score = 89.0 bits (219), Expect = 2e-18
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WDLRS+VRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1881 WDLRSRVRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSCNGG 1930
>ABD16783.1 probable ATPase, partial (chloroplast) [Fuchsia hybrid cultivar]
Length = 296
Score = 87.0 bits (214), Expect = 3e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK
Sbjct: 229 WDLRSQVRSVQDHGILFYQIGRAVAQNVLLRNCPIDPISIYMKKK 273
>AMZ03480.1 Ycf2 (chloroplast) [Bienertia sinuspersici] AMZ03498.1 Ycf2
(chloroplast) [Bienertia sinuspersici]
Length = 2145
Score = 88.6 bits (218), Expect = 3e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK
Sbjct: 1733 WDLRSQVRSVQDHGILFYQIGRAVAQNVILSNCPIDPISIYMKKK 1777
>YP_009143850.1 ycf2 protein (chloroplast) [Salicornia bigelovii] YP_009143867.1 ycf2
protein (chloroplast) [Salicornia bigelovii] AIC37236.1
ycf2 protein (chloroplast) [Salicornia bigelovii]
AIC37253.1 ycf2 protein (chloroplast) [Salicornia
bigelovii]
Length = 2153
Score = 88.6 bits (218), Expect = 3e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK
Sbjct: 1741 WDLRSQVRSVQDHGILFYQIGRAVAQNVILSNCPIDPISIYMKKK 1785
>YP_009143766.1 ycf2 protein (chloroplast) [Salicornia europaea] YP_009143784.1 ycf2
protein (chloroplast) [Salicornia europaea] AIC37152.1
ycf2 protein (chloroplast) [Salicornia europaea]
AIC37170.1 ycf2 protein (chloroplast) [Salicornia
europaea]
Length = 2153
Score = 88.6 bits (218), Expect = 3e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK
Sbjct: 1741 WDLRSQVRSVQDHGILFYQIGRAVAQNVILSNCPIDPISIYMKKK 1785
>YP_009143682.1 ycf2 protein (chloroplast) [Salicornia brachiata] YP_009143700.1 ycf2
protein (chloroplast) [Salicornia brachiata] AIC37068.1
ycf2 protein (chloroplast) [Salicornia brachiata]
AIC37086.1 ycf2 protein (chloroplast) [Salicornia
brachiata]
Length = 2165
Score = 88.6 bits (218), Expect = 3e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKK 201
WDLRSQVRSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK
Sbjct: 1753 WDLRSQVRSVQDHGILFYQIGRAVAQNVILSNCPIDPISIYMKKK 1797
>YP_009129475.1 conserved hypothetical protein ycf2 (chloroplast) [Goodyera fumata]
YP_009129493.1 conserved hypothetical protein ycf2
(chloroplast) [Goodyera fumata] AHZ43084.1 conserved
hypothetical protein ycf2 (chloroplast) [Goodyera fumata]
AHZ43085.1 conserved hypothetical protein ycf2
(chloroplast) [Goodyera fumata]
Length = 2284
Score = 88.6 bits (218), Expect = 3e-18
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -3
Query: 335 WDLRSQVRSVQDHGILFYHIGRDVAQNVVLCNCPIDPISIYMKKKIRGGG 186
WD RSQ+RSVQDHGILFY IGR VAQNV+L NCPIDPISIYMKKK GG
Sbjct: 1867 WDFRSQIRSVQDHGILFYQIGRAVAQNVLLSNCPIDPISIYMKKKSSKGG 1916