BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00037937
         (239 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...    71   1e-12
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...    59   2e-08
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...    59   2e-08
OAE30778.1 hypothetical protein AXG93_4876s1190 [Marchantia poly...    58   2e-08
KYP36888.1 Retrovirus-related Pol polyprotein from transposon TN...    54   1e-07
KYP69992.1 Retrovirus-related Pol polyprotein from transposon TN...    56   2e-07
KYP50610.1 Retrovirus-related Pol polyprotein from transposon TN...    55   3e-07
KYP31184.1 Retrovirus-related Pol polyprotein from transposon TN...    52   1e-06
KYP35896.1 Retrovirus-related Pol polyprotein from transposon TN...    53   1e-06

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = +1

Query: 55  MGGKSLKVEKFTWRNSFNLWQIKVKALLKREGLWTPLVKQVPNPEPENMASLEEKAHSTL 234
           M   ++K++KFT RNSF+LWQIK++ALLK++G W PL K         MA LEEKAHST+
Sbjct: 1   MSALNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEKAHSTI 60

Query: 235 L 237
           +
Sbjct: 61  M 61


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 13/70 (18%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPL----VKQVPNPEP---------ENMAS 207
           ++++EKF  +NSFNLW+IK++ALLK + +W PL    VKQ    EP         E +A 
Sbjct: 6   TIRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAE 65

Query: 208 LEEKAHSTLL 237
            EEKAHS +L
Sbjct: 66  QEEKAHSLIL 75


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 13/70 (18%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPL----VKQVPNPEP---------ENMAS 207
           ++++EKF  +NSFNLW+IK++ALLK + +W PL    VKQ    EP         E +A 
Sbjct: 6   TIRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAE 65

Query: 208 LEEKAHSTLL 237
            EEKAHS +L
Sbjct: 66  QEEKAHSLIL 75


>OAE30778.1 hypothetical protein AXG93_4876s1190 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 232

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +1

Query: 55  MGGKSLKVEKFTWRNSFNLWQIKVKALLKREGLWTPLV--KQVPNPEPENMASLEEKAHS 228
           M G  LK+EKFT   SF+LW+IK+++LLK +G+W PL+  K   +        +EEKAHS
Sbjct: 1   MSGTMLKIEKFTEGYSFSLWKIKMESLLKSQGIWAPLIRDKGAMDVASSEYKLMEEKAHS 60

Query: 229 TLL 237
            ++
Sbjct: 61  NII 63


>KYP36888.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 101

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 38/54 (70%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPLVKQVPNPEPENMASLEEKAHS 228
           ++K+EKF  +N FNLW+IK++ALLK + +W PLV    + + EN+A  EEK  S
Sbjct: 4   TIKIEKFNGKNIFNLWRIKMRALLKEQRVWGPLVS--VSAKKENIAKSEEKPTS 55


>KYP69992.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 13/70 (18%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPL----VKQVPNPE---------PENMAS 207
           ++K+EKF  +NSFNLW+IK+ ALLK + +W PL    VK+    E          E++A 
Sbjct: 4   TIKIEKFNGKNSFNLWRIKMHALLKEQRVWGPLATTSVKKESKTELSNKSTSIKKEDLAE 63

Query: 208 LEEKAHSTLL 237
            EEKAHS +L
Sbjct: 64  QEEKAHSLIL 73


>KYP50610.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 210

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 13/70 (18%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPL----VKQVPNPE---------PENMAS 207
           ++K+EKF  +NSFNLW+IK++ALLK + +W PL    VK+    E          E+ A 
Sbjct: 4   TIKIEKFNGKNSFNLWRIKMRALLKEQRVWGPLATTSVKKERKTELSDKSTSIKKEDHAE 63

Query: 208 LEEKAHSTLL 237
            EEKAHS +L
Sbjct: 64  QEEKAHSLIL 73


>KYP31184.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 123

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 13/70 (18%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPLVKQVPNPEP-------------ENMAS 207
           ++++EKF  +NSFNLW+IK++ALLK + +W  LV      E              E++  
Sbjct: 4   TIRIEKFNGKNSFNLWRIKMRALLKEQRVWGSLVSVSAKKENIAKSEEKPTSVKNEDLVE 63

Query: 208 LEEKAHSTLL 237
            EEKAHS +L
Sbjct: 64  QEEKAHSLIL 73


>KYP35896.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 208

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 12/69 (17%)
 Frame = +1

Query: 67  SLKVEKFTWRNSFNLWQIKVKALLKREGLWTPL----VKQVPNPE--------PENMASL 210
           ++++EKF  +N+FNLW+IK++ALLK + +W PL    +K+    E         E++A  
Sbjct: 3   TIRIEKFNGKNNFNLWRIKMRALLKEQRVWGPLATTSIKKESKTESSKSTSIKKEDLAEQ 62

Query: 211 EEKAHSTLL 237
           EEK HS +L
Sbjct: 63  EEKTHSLIL 71