BLASTX nr result
ID: Lithospermum23_contig00037817
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00037817
(294 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP40616.1 Retrovirus-related Pol polyprotein from transposon TN... 143 2e-41
AAW57789.1 putative polyprotein [Oryza sativa Japonica Group] 154 2e-41
ABA96551.1 retrotransposon protein, putative, Ty1-copia subclass... 152 7e-41
ABF94836.1 retrotransposon protein, putative, unclassified [Oryz... 152 7e-41
AAO37957.1 putative gag-pol polyprotein [Oryza sativa Japonica G... 152 7e-41
ABF93543.1 retrotransposon protein, putative, unclassified [Oryz... 152 7e-41
AAN60494.1 Putative Zea mays retrotransposon Opie-2 [Oryza sativ... 152 7e-41
CAE03600.2 OSJNBb0004A17.2 [Oryza sativa Japonica Group] 152 7e-41
CCI55376.1 PH01B035L11.21 [Phyllostachys edulis] 152 1e-40
KYP55105.1 Copia protein [Cajanus cajan] 148 1e-40
XP_019069794.1 PREDICTED: uncharacterized protein LOC101248881 [... 151 2e-40
ABA98847.1 retrotransposon protein, putative, unclassified [Oryz... 150 2e-40
AAP53706.1 retrotransposon protein, putative, unclassified [Oryz... 150 2e-40
JAU73346.1 Retrovirus-related Pol polyprotein from transposon TN... 137 3e-40
XP_011459700.1 PREDICTED: uncharacterized protein LOC105350050 [... 150 3e-40
AQA29556.1 reverse transcriptase [Zea mays] 150 3e-40
AAN40025.1 putative gag-pol polyprotein [Zea mays] 150 5e-40
KYP45519.1 Copia protein [Cajanus cajan] 140 5e-40
CAE04585.2 OSJNBb0006N15.2 [Oryza sativa Japonica Group] 149 8e-40
CCI55284.1 PH01B001G05.7 [Phyllostachys edulis] 149 9e-40
>KYP40616.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 197
Score = 143 bits (361), Expect = 2e-41
Identities = 66/95 (69%), Positives = 82/95 (86%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+D+DETFAPVAR+E+IR++LA+AS M+FKL+QMDVKSAFLNG ++EEV V+ PPGF D
Sbjct: 62 IDYDETFAPVARIEAIRLLLAYASIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFK 121
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGF 287
YPNHV+KL KALYGLKQAPR+WY+RLS L N +
Sbjct: 122 YPNHVYKLKKALYGLKQAPRSWYDRLSKFLTKNDY 156
>AAW57789.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1799
Score = 154 bits (388), Expect = 2e-41
Identities = 74/96 (77%), Positives = 84/96 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKSAFLNG +EEEV VK PPGFE+
Sbjct: 1365 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1424
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKLDKALYGLKQAPRAWYERL T L+ NGF+
Sbjct: 1425 FPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFE 1460
>ABA96551.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1487
Score = 152 bits (384), Expect = 7e-41
Identities = 70/95 (73%), Positives = 84/95 (88%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DFDETFAPVAR+E+IR++LAFA+ FKLHQMDVKSAFLNGF++EEV VK PPGFE+++
Sbjct: 1053 MDFDETFAPVARIEAIRLLLAFAASKGFKLHQMDVKSAFLNGFIQEEVYVKQPPGFENSD 1112
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGF 287
+PNHVFKL KALYGLKQAPRAWY+RL L+ GF
Sbjct: 1113 FPNHVFKLSKALYGLKQAPRAWYDRLKNFLLTKGF 1147
>ABF94836.1 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1948
Score = 152 bits (384), Expect = 7e-41
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKSAFLNG +EEEV VK PPGFE+
Sbjct: 1340 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1399
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKL+KALYGLKQAPRAWYERL T L+ NGF+
Sbjct: 1400 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFE 1435
>AAO37957.1 putative gag-pol polyprotein [Oryza sativa Japonica Group] ABF99896.1
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1969
Score = 152 bits (384), Expect = 7e-41
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKSAFLNG +EEEV VK PPGFE+
Sbjct: 1361 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1420
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKL+KALYGLKQAPRAWYERL T L+ NGF+
Sbjct: 1421 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFE 1456
>ABF93543.1 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2124
Score = 152 bits (384), Expect = 7e-41
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKSAFLNG +EEEV VK PPGFE+
Sbjct: 1340 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1399
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKL+KALYGLKQAPRAWYERL T L+ NGF+
Sbjct: 1400 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFE 1435
>AAN60494.1 Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group]
Length = 2145
Score = 152 bits (384), Expect = 7e-41
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKSAFLNG +EEEV VK PPGFE+
Sbjct: 1361 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1420
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKL+KALYGLKQAPRAWYERL T L+ NGF+
Sbjct: 1421 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFE 1456
>CAE03600.2 OSJNBb0004A17.2 [Oryza sativa Japonica Group]
Length = 2256
Score = 152 bits (384), Expect = 7e-41
Identities = 73/96 (76%), Positives = 84/96 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKSAFLNG +EEEV VK PPGFE+
Sbjct: 1340 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1399
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKL+KALYGLKQAPRAWYERL T L+ NGF+
Sbjct: 1400 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFE 1435
>CCI55376.1 PH01B035L11.21 [Phyllostachys edulis]
Length = 2029
Score = 152 bits (383), Expect = 1e-40
Identities = 71/96 (73%), Positives = 86/96 (89%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL+QMDVKSAFLNG +EEEV V+ PPGFE+
Sbjct: 1547 LDFEETFAPVARLEAIRILLAFAASKGFKLYQMDVKSAFLNGLIEEEVYVRQPPGFENPK 1606
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
YPNHVFKL KALYGLKQAPRAWYERL ++L+++GF+
Sbjct: 1607 YPNHVFKLSKALYGLKQAPRAWYERLKSYLLSHGFE 1642
>KYP55105.1 Copia protein [Cajanus cajan]
Length = 495
Score = 148 bits (374), Expect = 1e-40
Identities = 69/97 (71%), Positives = 86/97 (88%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+D++ET+APVARLE+IR++LA+AS MDFKL+QMDVKSAFLNGF++EEV V+ PPGFE++
Sbjct: 60 IDYEETYAPVARLEAIRMLLAYASIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSE 119
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFKK 293
+PNHVFKL KALYGLKQAPRAWYERLS L+ F +
Sbjct: 120 FPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTR 156
>XP_019069794.1 PREDICTED: uncharacterized protein LOC101248881 [Solanum
lycopersicum]
Length = 1031
Score = 151 bits (381), Expect = 2e-40
Identities = 68/97 (70%), Positives = 89/97 (91%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+D+DETFAPVAR+E+IRI++A+A+HM+FKL+QMDVKSAFLNG+L+EEV VK PPGFE+
Sbjct: 926 IDYDETFAPVARIEAIRILVAYAAHMEFKLYQMDVKSAFLNGYLQEEVYVKQPPGFENTI 985
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFKK 293
+P+HV+KLDKALYGLKQAPRAW +RLST L+ +G+ +
Sbjct: 986 HPDHVYKLDKALYGLKQAPRAWSDRLSTFLLTHGYTR 1022
>ABA98847.1 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1417
Score = 150 bits (380), Expect = 2e-40
Identities = 70/95 (73%), Positives = 84/95 (88%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DFDETFAPVAR+E+IR++LAFA+ FKL+QMDVKSAFLNGF++EEV VK PPGFE+ +
Sbjct: 983 LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1042
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGF 287
+PNHVFKL KALYGLKQAPRAWY+RL L+A GF
Sbjct: 1043 FPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGF 1077
>AAP53706.1 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1419
Score = 150 bits (380), Expect = 2e-40
Identities = 70/95 (73%), Positives = 84/95 (88%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DFDETFAPVAR+E+IR++LAFA+ FKL+QMDVKSAFLNGF++EEV VK PPGFE+ +
Sbjct: 985 LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1044
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGF 287
+PNHVFKL KALYGLKQAPRAWY+RL L+A GF
Sbjct: 1045 FPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGF 1079
>JAU73346.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 99
Score = 137 bits (345), Expect = 3e-40
Identities = 66/91 (72%), Positives = 75/91 (82%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
VDFDETFAPVARLESIR+ L A ++FK+HQMDVKSAFLNG L+EEV V P GFED
Sbjct: 9 VDFDETFAPVARLESIRLFLGMACILNFKVHQMDVKSAFLNGILQEEVYVAQPKGFEDPT 68
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLV 275
YP+HV+KL KALYGLKQAPRAWYE L+ L+
Sbjct: 69 YPDHVYKLKKALYGLKQAPRAWYEHLTKFLI 99
>XP_011459700.1 PREDICTED: uncharacterized protein LOC105350050 [Fragaria vesca
subsp. vesca]
Length = 1261
Score = 150 bits (379), Expect = 3e-40
Identities = 70/97 (72%), Positives = 85/97 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DFDETFAPVARLESIR++LA A H+ FKL+QMDVK+AFLNG LEEEV V+ P GF+D +
Sbjct: 901 LDFDETFAPVARLESIRLLLAIACHLRFKLYQMDVKTAFLNGLLEEEVFVEQPKGFQDPH 960
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFKK 293
+PNHV+KL KALYGLKQAPRAWY+RLST+LV G+ +
Sbjct: 961 HPNHVYKLKKALYGLKQAPRAWYDRLSTYLVGKGYAR 997
>AQA29556.1 reverse transcriptase [Zea mays]
Length = 1581
Score = 150 bits (379), Expect = 3e-40
Identities = 71/96 (73%), Positives = 85/96 (88%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF ET+APVARLESIRI+LA+A++ DFKL+QMDVKSAFLNG ++EEV V+ PPGFED+
Sbjct: 1340 LDFGETYAPVARLESIRILLAYATYHDFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSE 1399
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
YPNHV+KL KALYGLKQAPRAWYE L ++ANGFK
Sbjct: 1400 YPNHVYKLSKALYGLKQAPRAWYECLRDFIIANGFK 1435
>AAN40025.1 putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 150 bits (378), Expect = 5e-40
Identities = 71/96 (73%), Positives = 85/96 (88%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DFDET+APVARLESIRI+LA+A++ FKL+QMDVKSAFLNG ++EEV V+ PPGFED+
Sbjct: 1457 LDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSE 1516
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
YPNHV++L KALYGLKQAPRAWYE L L+ANGFK
Sbjct: 1517 YPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFK 1552
>KYP45519.1 Copia protein [Cajanus cajan]
Length = 203
Score = 140 bits (352), Expect = 5e-40
Identities = 64/95 (67%), Positives = 82/95 (86%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+D+DETFAPVAR+E+IR++LA++S M+FKL+QMDVKSAFLNG ++EEV V+ PPGF D
Sbjct: 62 IDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFK 121
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGF 287
PNHV+KL KALYGLKQAPR+WY+RLS L+ N +
Sbjct: 122 NPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDY 156
>CAE04585.2 OSJNBb0006N15.2 [Oryza sativa Japonica Group]
Length = 1134
Score = 149 bits (376), Expect = 8e-40
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DFDETFAPVAR+E+IR++LAFA+ FKL+QMDVKSAFLNGF++EEV VK PPGFE+ +
Sbjct: 759 LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 818
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGF 287
+PNHVFKL KALYGLKQAPRAWY+RL +A GF
Sbjct: 819 FPNHVFKLSKALYGLKQAPRAWYDRLKNFFLAKGF 853
>CCI55284.1 PH01B001G05.7 [Phyllostachys edulis]
Length = 1697
Score = 149 bits (376), Expect = 9e-40
Identities = 71/96 (73%), Positives = 83/96 (86%)
Frame = +3
Query: 3 VDFDETFAPVARLESIRIILAFASHMDFKLHQMDVKSAFLNGFLEEEVLVK*PPGFEDAN 182
+DF+ETFAPVARLE+IRI+LAFA+ FKL QMDVKS+FLNGF+EEEV VK PPGFE+
Sbjct: 1240 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSSFLNGFIEEEVYVKQPPGFENPK 1299
Query: 183 YPNHVFKLDKALYGLKQAPRAWYERLSTHLVANGFK 290
+PNHVFKL KALYGLKQAPRAWY+RL + L+ N FK
Sbjct: 1300 FPNHVFKLSKALYGLKQAPRAWYDRLKSFLLKNDFK 1335