BLASTX nr result
ID: Lithospermum23_contig00037572
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00037572
(644 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019173288.1 PREDICTED: uncharacterized protein LOC109168888 [... 270 9e-81
KYP59836.1 Retrovirus-related Pol polyprotein from transposon TN... 248 3e-79
AAM94928.1 putative polyprotein [Oryza sativa Japonica Group] 256 7e-79
AAX96353.1 retrotransposon protein, putative, Ty1-copia sub-clas... 253 1e-78
XP_002489303.1 hypothetical protein SORBIDRAFT_0010s005460 [Sorg... 257 2e-78
AAM00978.1 Putative retrovirus-related pol polyprotein from tran... 252 6e-78
AAX92916.1 retrotransposon protein, putative, Ty1-copia sub-clas... 255 2e-77
ABG66099.1 retrotransposon protein, putative, Ty1-copia subclass... 252 2e-77
JAT53147.1 Retrovirus-related Pol polyprotein from transposon TN... 250 2e-77
AAK39592.1 putative retrotransposon polyprotein [Oryza sativa Ja... 256 3e-77
ABF97861.1 retrotransposon protein, putative, Ty1-copia subclass... 255 4e-77
CAE04807.2 OSJNBb0022P19.2 [Oryza sativa Japonica Group] 259 7e-77
ABA97039.1 retrotransposon protein, putative, Ty1-copia subclass... 248 3e-76
ABA99813.1 retrotransposon protein, putative, Ty1-copia subclass... 258 5e-76
ABA96637.2 retrotransposon protein, putative, Ty1-copia subclass... 253 6e-76
ABA97460.1 retrotransposon protein, putative, Ty1-copia subclass... 252 7e-76
KYP72325.1 Retrovirus-related Pol polyprotein from transposon TN... 247 7e-76
ABB47865.2 retrotransposon protein, putative, Ty1-copia subclass... 256 8e-76
AAM95676.1 putative polyprotein [Oryza sativa Japonica Group] 256 9e-76
ABA97124.1 retrotransposon protein, putative, Ty1-copia subclass... 257 1e-75
>XP_019173288.1 PREDICTED: uncharacterized protein LOC109168888 [Ipomoea nil]
Length = 1079
Score = 270 bits (689), Expect = 9e-81
Identities = 134/208 (64%), Positives = 160/208 (76%)
Frame = +2
Query: 20 LRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFW 199
L++SKR R E FG DFI +++E+ + +S++ V I+E++PKT+ AMRS+DA FW
Sbjct: 528 LKRSKRQRTETSFGSDFIT-YITELKDINELSEQFVCQLILEEEPKTFEAAMRSVDAVFW 586
Query: 200 REAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQK 379
+EA++SELDSI SN TWELV+LPKG K I KWIFK+K+RPDGSIERFKARLV +G+ QK
Sbjct: 587 KEAVQSELDSIKSNHTWELVELPKGAKPIGCKWIFKRKLRPDGSIERFKARLVAKGYKQK 646
Query: 380 KDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVS 559
DYF TYSPVTK+ATIR H +HQMDVKTAFLNGDLEEEIYM QP G V
Sbjct: 647 FGEDYFCTYSPVTKIATIRVLFALAVAHKWTVHQMDVKTAFLNGDLEEEIYMEQPSGCVD 706
Query: 560 QGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEGKVC+L KSLYGLKQAPKQW EKF
Sbjct: 707 PGQEGKVCRLVKSLYGLKQAPKQWNEKF 734
>KYP59836.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 290
Score = 248 bits (632), Expect = 3e-79
Identities = 124/210 (59%), Positives = 149/210 (70%)
Frame = +2
Query: 14 EGLRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDAT 193
E LR+SKR R E FG DF Y++E+DP ++ EA+ S DA
Sbjct: 3 EDLRRSKRQRKETSFGSDFYT-------------------YLVENDPISFSEAISSSDAI 43
Query: 194 FWREAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFT 373
FW+EAI+ E+DSI N TW LVDLPKG K I KWIFK+K PDGSIE++KARLV +GFT
Sbjct: 44 FWKEAIRIEIDSIKENNTWTLVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFT 103
Query: 374 QKKDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGF 553
QK+DID+FDT++PV ++++IR H L IHQMDVKTAFLNG+LEEEIYMTQPEG
Sbjct: 104 QKQDIDFFDTFAPVARISSIRVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGC 163
Query: 554 VSQGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQE KVC+L KSLYGLKQAPKQW+EKF
Sbjct: 164 EVPGQENKVCRLLKSLYGLKQAPKQWHEKF 193
>AAM94928.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 619
Score = 256 bits (655), Expect = 7e-79
Identities = 123/207 (59%), Positives = 154/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 300 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 340
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 341 EAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 400
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 401 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 460
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 461 GQEGMVCKLLKSLYGLKQAPKQWHEKF 487
>AAX96353.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA91827.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 527
Score = 253 bits (647), Expect = 1e-78
Identities = 120/210 (57%), Positives = 152/210 (72%)
Frame = +2
Query: 14 EGLRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDAT 193
E R+SKR R K FGDDF V Y+++D PK+ EA S DA
Sbjct: 59 EAPRRSKRQRTAKSFGDDFTV-------------------YLVDDTPKSISEAYASPDAD 99
Query: 194 FWREAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFT 373
+W+EA++SE+DSI++N TWE+ + P GCK + KW+FKKK+RPDG+IE++KARLV +G+T
Sbjct: 100 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 159
Query: 374 QKKDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGF 553
QK+ D+FDTYSPV ++ TIR HGL +HQMDVKT FLNG+L+EEIYM QP+GF
Sbjct: 160 QKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGF 219
Query: 554 VSQGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
V +GQEGKVCKL KSLYGLKQAPKQW+EKF
Sbjct: 220 VVEGQEGKVCKLLKSLYGLKQAPKQWHEKF 249
>XP_002489303.1 hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor]
Length = 699
Score = 257 bits (657), Expect = 2e-78
Identities = 123/207 (59%), Positives = 152/207 (73%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
R+SKR RV K FG+DFI+ Y+++D P T EA S D+ W+
Sbjct: 162 RRSKRQRVAKSFGEDFII-------------------YLVDDTPTTISEAYSSSDSDMWK 202
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+VD P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 203 EAVQSEMDSIMSNGTWEVVDRPFGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 262
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
DYFDTYSPV ++ TIR HG IHQMDVKTAFLNG+LEEEIYM QP+GF++
Sbjct: 263 GEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEEIYMDQPDGFIAN 322
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEGKVCKL KSLYGLKQAPKQW+EKF
Sbjct: 323 GQEGKVCKLLKSLYGLKQAPKQWHEKF 349
>AAM00978.1 Putative retrovirus-related pol polyprotein from transposon Tnt
1-94 [Oryza sativa Japonica Group] AAP53107.1
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 536
Score = 252 bits (643), Expect = 6e-78
Identities = 121/207 (58%), Positives = 153/207 (73%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 29 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 69
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 70 EAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 129
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEI M QP+G+V +
Sbjct: 130 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEICMDQPDGYVLE 189
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQ+G VCKL KSLYGLKQAPKQW+EKF
Sbjct: 190 GQDGMVCKLLKSLYGLKQAPKQWHEKF 216
>AAX92916.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 713
Score = 255 bits (651), Expect = 2e-77
Identities = 121/210 (57%), Positives = 153/210 (72%)
Frame = +2
Query: 14 EGLRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDAT 193
E R+SKR R K FGDDF V Y+++D PK+ EA S DA
Sbjct: 157 EAPRRSKRQRTAKSFGDDFTV-------------------YLVDDTPKSISEAYASPDAD 197
Query: 194 FWREAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFT 373
+W+EA++SE+DSI++N TWE+ + P GCK + KW+FKKK+RPDG+IE++KARLV +G+T
Sbjct: 198 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 257
Query: 374 QKKDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGF 553
QK+ D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+L+EEIYM QP+GF
Sbjct: 258 QKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 317
Query: 554 VSQGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
V +GQEGKVCKL KSLYGLKQAPKQW+EKF
Sbjct: 318 VVEGQEGKVCKLLKSLYGLKQAPKQWHEKF 347
>ABG66099.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 591
Score = 252 bits (643), Expect = 2e-77
Identities = 119/210 (56%), Positives = 154/210 (73%)
Frame = +2
Query: 14 EGLRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDAT 193
E R+SKR R+ K FGDDFIV Y+++D PK+ EA S DA
Sbjct: 53 EAPRRSKRQRMAKSFGDDFIV-------------------YLVDDTPKSISEAYASPDAD 93
Query: 194 FWREAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFT 373
+W++A++SE+DSI++N TWE+ + P GCK + KW+FKKK+RPDG+IE++KARLV +G+T
Sbjct: 94 YWKKAVRSEMDSIITNGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 153
Query: 374 QKKDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGF 553
QK+ D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+L+E+IYM QP+ F
Sbjct: 154 QKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEKIYMDQPDAF 213
Query: 554 VSQGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
V +GQEGKVCKL KSLYGLKQAPKQW+EKF
Sbjct: 214 VVEGQEGKVCKLLKSLYGLKQAPKQWHEKF 243
>JAT53147.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 524
Score = 250 bits (638), Expect = 2e-77
Identities = 120/207 (57%), Positives = 148/207 (71%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
R+SKR R+EK FG+D+ N ++EDDP TY EA+ S ++ FW+
Sbjct: 266 RRSKRARLEKSFGEDYFTN-------------------LVEDDPNTYGEAISSPESAFWK 306
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA+K E+DSI+ N TW LVDLP GCK I KWIF+KK+RPDGSI+++K ++V +GF QK+
Sbjct: 307 EAVKCEMDSIMVNGTWVLVDLPPGCKTIGCKWIFRKKLRPDGSIDKYKVKIVAKGFKQKE 366
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
IDYFDTYSPV +M TIR H L+IHQMDVKTAFLNG+LEEEIYM QPEGFV+
Sbjct: 367 GIDYFDTYSPVARMTTIRVLVALASIHDLKIHQMDVKTAFLNGELEEEIYMDQPEGFVAS 426
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
G E KVCKL +SLYGLKQ KQW+ KF
Sbjct: 427 GNEHKVCKLVRSLYGLKQVSKQWHSKF 453
>AAK39592.1 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
Length = 804
Score = 256 bits (654), Expect = 3e-77
Identities = 123/207 (59%), Positives = 154/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 268 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 308
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 309 EAVRSEMDSIMSNGTWEVVEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 368
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 369 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 428
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 429 GQEGMVCKLLKSLYGLKQAPKQWHEKF 455
>ABF97861.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 764
Score = 255 bits (651), Expect = 4e-77
Identities = 121/210 (57%), Positives = 153/210 (72%)
Frame = +2
Query: 14 EGLRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDAT 193
E R+SKR R K FGDDF V Y+++D PK+ EA S DA
Sbjct: 188 EAPRRSKRQRTAKSFGDDFTV-------------------YLVDDTPKSISEAYASRDAD 228
Query: 194 FWREAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFT 373
+W+EA++SE+DSI++N TWE+ + P GCK + KW+FKKK+RPDG+IE++KARLV +G+T
Sbjct: 229 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 288
Query: 374 QKKDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGF 553
QK+ D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+L+EEIYM QP+GF
Sbjct: 289 QKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 348
Query: 554 VSQGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
V +GQEGKVCKL KSLYGLKQAPKQW+EKF
Sbjct: 349 VVEGQEGKVCKLLKSLYGLKQAPKQWHEKF 378
>CAE04807.2 OSJNBb0022P19.2 [Oryza sativa Japonica Group]
Length = 1099
Score = 259 bits (662), Expect = 7e-77
Identities = 123/207 (59%), Positives = 155/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S+DA +W+
Sbjct: 689 RKSKRQRVAKSFGDDYIV-------------------YLMDDTPRTIEEAYSSLDANYWK 729
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 730 EAVRSEMDSIISNGTWEVVERPYGCKSVGCKWVFKKKLRPDGTIEKYKARLVTKGYTQKE 789
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 790 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 849
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 850 GQEGMVCKLLKSLYGLKQAPKQWHEKF 876
>ABA97039.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 542
Score = 248 bits (632), Expect = 3e-76
Identities = 120/207 (57%), Positives = 151/207 (72%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR R K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 164 RKSKRQRFAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 204
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK KW+FKKK+RPDG+IE++KARLV +G TQK+
Sbjct: 205 EAVRSEMDSIMSNGTWEVVECPYGCKPEGCKWVFKKKLRPDGTIEKYKARLVAKGHTQKE 264
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +H+MDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 265 GGDFFDTYSPVARLTTIRLLLALATSHGLLVHKMDVKTAFLNGELEEEIYMDQPDGYVLE 324
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLK+APKQW+EKF
Sbjct: 325 GQEGMVCKLLKSLYGLKKAPKQWHEKF 351
>ABA99813.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 258 bits (660), Expect = 5e-76
Identities = 123/207 (59%), Positives = 155/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S+DA +W+
Sbjct: 912 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSLDADYWK 952
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 953 EAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 1012
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 1013 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 1072
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 1073 GQEGMVCKLLKSLYGLKQAPKQWHEKF 1099
>ABA96637.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 253 bits (646), Expect = 6e-76
Identities = 121/207 (58%), Positives = 153/207 (73%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y ++D P+T EA S DA +W+
Sbjct: 433 RKSKRQRVAKSFGDDYIV-------------------YFVDDTPRTIEEAYSSPDADYWK 473
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 474 EAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 533
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+L+EEIYM QP+G+V +
Sbjct: 534 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGYVLE 593
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW++KF
Sbjct: 594 GQEGMVCKLLKSLYGLKQAPKQWHKKF 620
>ABA97460.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 786
Score = 252 bits (644), Expect = 7e-76
Identities = 120/210 (57%), Positives = 152/210 (72%)
Frame = +2
Query: 14 EGLRKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDAT 193
E R+SKR R K FGDDF V Y+++D PK+ EA S DA
Sbjct: 147 EAPRRSKRQRTAKSFGDDFTV-------------------YLMDDTPKSISEAYASPDAD 187
Query: 194 FWREAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFT 373
+W+EA++SE+DSI++N TWE+ + P GCK + KW+FKKK+RPDG+IE++KARLV +G+T
Sbjct: 188 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 247
Query: 374 QKKDIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGF 553
QK+ D+FDTYSPV ++ TI HGL +HQMDVKTAFLNG+L+EEIYM QP+GF
Sbjct: 248 QKEGEDFFDTYSPVARLTTIHVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 307
Query: 554 VSQGQEGKVCKLKKSLYGLKQAPKQWYEKF 643
V +GQEGKVCKL KSLYGLKQAPKQW+EKF
Sbjct: 308 VVEGQEGKVCKLLKSLYGLKQAPKQWHEKF 337
>KYP72325.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 565
Score = 247 bits (631), Expect = 7e-76
Identities = 121/207 (58%), Positives = 146/207 (70%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
R SKR R K FG +F ++++EDDPKTY EAMRS+DA FW+
Sbjct: 346 RISKRIRKAKDFGPEFY-------------------SFLLEDDPKTYSEAMRSVDAPFWK 386
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EAI E+DS+ N+TW L DLP GCK I KW+F+KK+R DGSI++FKARLV+ G+ Q +
Sbjct: 387 EAINDEIDSLKINKTWFLTDLPPGCKSIGCKWVFRKKLRTDGSIDKFKARLVVIGYKQVE 446
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
+D+FDTYSPV+K+ TIR LEIHQMDVKTAFLNGDLEEEIYM QPEGF+
Sbjct: 447 GVDFFDTYSPVSKVTTIRVLIALACVFNLEIHQMDVKTAFLNGDLEEEIYMNQPEGFIEP 506
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
G E KVCKL KSLYGLKQ PKQW++KF
Sbjct: 507 GMENKVCKLVKSLYGLKQTPKQWHDKF 533
>ABB47865.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1126
Score = 256 bits (655), Expect = 8e-76
Identities = 123/207 (59%), Positives = 154/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 621 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 661
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 662 EAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 721
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 722 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 781
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 782 GQEGMVCKLLKSLYGLKQAPKQWHEKF 808
>AAM95676.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1138
Score = 256 bits (655), Expect = 9e-76
Identities = 123/207 (59%), Positives = 154/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 633 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 673
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 674 EAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 733
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 734 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 793
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 794 GQEGMVCKLLKSLYGLKQAPKQWHEKF 820
>ABA97124.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1453
Score = 257 bits (657), Expect = 1e-75
Identities = 123/207 (59%), Positives = 154/207 (74%)
Frame = +2
Query: 23 RKSKRPRVEKYFGDDFIVNFLSEITCDDYISDELVSAYIIEDDPKTYCEAMRSIDATFWR 202
RKSKR RV K FGDD+IV Y+++D P+T EA S DA +W+
Sbjct: 917 RKSKRQRVAKSFGDDYIV-------------------YLVDDTPRTIEEAYSSPDADYWK 957
Query: 203 EAIKSELDSIVSNQTWELVDLPKGCKLISNKWIFKKKMRPDGSIERFKARLVIRGFTQKK 382
EA++SE+DSI+SN TWE+V+ P GCK + KW+FKKK+RPDG+IE++KARLV +G+TQK+
Sbjct: 958 EAVRSEIDSIISNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 1017
Query: 383 DIDYFDTYSPVTKMATIRXXXXXXXXHGLEIHQMDVKTAFLNGDLEEEIYMTQPEGFVSQ 562
D+FDTYSPV ++ TIR HGL +HQMDVKTAFLNG+LEEEIYM QP+G+V +
Sbjct: 1018 GEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLE 1077
Query: 563 GQEGKVCKLKKSLYGLKQAPKQWYEKF 643
GQEG VCKL KSLYGLKQAPKQW+EKF
Sbjct: 1078 GQEGMVCKLLKSLYGLKQAPKQWHEKF 1104