BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00037237
         (346 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsula...    90   1e-18
XP_010275998.1 PREDICTED: polyadenylation and cleavage factor ho...    88   5e-18
KVH97396.1 CID domain-containing protein, partial [Cynara cardun...    88   6e-18
XP_011074352.1 PREDICTED: polyadenylation and cleavage factor ho...    86   3e-17
XP_011074351.1 PREDICTED: polyadenylation and cleavage factor ho...    86   3e-17
XP_011074350.1 PREDICTED: polyadenylation and cleavage factor ho...    86   3e-17
CDO99723.1 unnamed protein product [Coffea canephora]                  86   3e-17
KVH97398.1 CID domain-containing protein [Cynara cardunculus var...    86   4e-17
XP_011037706.1 PREDICTED: polyadenylation and cleavage factor ho...    84   1e-16
XP_011037705.1 PREDICTED: polyadenylation and cleavage factor ho...    84   1e-16
XP_011037702.1 PREDICTED: polyadenylation and cleavage factor ho...    84   1e-16
OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta]    84   1e-16
XP_017645983.1 PREDICTED: polyadenylation and cleavage factor ho...    83   3e-16
XP_016753658.1 PREDICTED: polyadenylation and cleavage factor ho...    83   3e-16
XP_016753657.1 PREDICTED: polyadenylation and cleavage factor ho...    83   3e-16
XP_017645981.1 PREDICTED: polyadenylation and cleavage factor ho...    83   3e-16
XP_016753656.1 PREDICTED: polyadenylation and cleavage factor ho...    83   3e-16
KJB67157.1 hypothetical protein B456_010G178200 [Gossypium raimo...    83   4e-16
XP_012450329.1 PREDICTED: polyadenylation and cleavage factor ho...    83   4e-16
XP_016683609.1 PREDICTED: polyadenylation and cleavage factor ho...    83   4e-16

>OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsularis]
          Length = 1003

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -3

Query: 200 EDDQNHVGLSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHGAGIADVICDRIIE 21
           +DD+    LS +DIV LYD +LSEL+ NSK II +LT+IAGEQR HG GIADVIC RI+E
Sbjct: 34  DDDEVVPTLSSEDIVQLYDAVLSELTFNSKPIITDLTIIAGEQREHGEGIADVICARIVE 93

Query: 20  VPVEQK 3
           VPVEQK
Sbjct: 94  VPVEQK 99


>XP_010275998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score = 88.2 bits (217), Expect = 5e-18
 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -3

Query: 236 RGLIKEMVHDQEEDDQNHVGL-SGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHG 60
           R L+KE   +    D + V   S ++IV LY+V+LSEL+ NSK II ELT+IAGEQR HG
Sbjct: 54  RALLKEREEEMRVSDDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQREHG 113

Query: 59  AGIADVICDRIIEVPVEQK 3
            GIAD IC RIIEVPVEQK
Sbjct: 114 EGIADAICARIIEVPVEQK 132


>KVH97396.1 CID domain-containing protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 1024

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
 Frame = -3

Query: 236 RGLIKEMVHDQEEDDQNHVGL-----SGDDIVFLYDVILSELSVNSKAIINELTVIAGEQ 72
           +GL+KE   D       H  +     S ++IV LY+++LSEL++NSK +I +LT+IAGEQ
Sbjct: 102 KGLLKEREEDIRVSSGRHDEIEIPSPSSEEIVELYEIVLSELTINSKPLITDLTIIAGEQ 161

Query: 71  RMHGAGIADVICDRIIEVPVEQK 3
           R HG GIAD IC RIIEVPVEQK
Sbjct: 162 REHGGGIADAICARIIEVPVEQK 184


>XP_011074352.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X3
           [Sesamum indicum]
          Length = 940

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVG--LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHGAGI 51
           + MV ++EE+ +   G  L  D+IV LY+++LSEL++NSK II +LT+IAG+QR HG GI
Sbjct: 43  RAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQRAHGEGI 102

Query: 50  ADVICDRIIEVPVEQK 3
           AD IC RIIEVP++QK
Sbjct: 103 ADAICARIIEVPIDQK 118


>XP_011074351.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Sesamum indicum]
          Length = 964

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVG--LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHGAGI 51
           + MV ++EE+ +   G  L  D+IV LY+++LSEL++NSK II +LT+IAG+QR HG GI
Sbjct: 43  RAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQRAHGEGI 102

Query: 50  ADVICDRIIEVPVEQK 3
           AD IC RIIEVP++QK
Sbjct: 103 ADAICARIIEVPIDQK 118


>XP_011074350.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Sesamum indicum]
          Length = 967

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVG--LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHGAGI 51
           + MV ++EE+ +   G  L  D+IV LY+++LSEL++NSK II +LT+IAG+QR HG GI
Sbjct: 43  RAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQRAHGEGI 102

Query: 50  ADVICDRIIEVPVEQK 3
           AD IC RIIEVP++QK
Sbjct: 103 ADAICARIIEVPIDQK 118


>CDO99723.1 unnamed protein product [Coffea canephora]
          Length = 1005

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 44/79 (55%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVG-----LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHG 60
           ++M+ ++E++ +   G     LS DD+V LY+V+LSEL  NSK +I +LT+IAGEQR HG
Sbjct: 47  RDMLKEREDELRVSEGVDVVLLSSDDVVKLYEVVLSELVFNSKPVITDLTIIAGEQRRHG 106

Query: 59  AGIADVICDRIIEVPVEQK 3
            GIAD IC RIIE PVEQK
Sbjct: 107 QGIADAICARIIEAPVEQK 125


>KVH97398.1 CID domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 954

 Score = 85.5 bits (210), Expect = 4e-17
 Identities = 44/66 (66%), Positives = 52/66 (78%)
 Frame = -3

Query: 200 EDDQNHVGLSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHGAGIADVICDRIIE 21
           +DD     LS ++IV LY+ +LSEL +NSK II +LT+IAGEQR HGAGIAD IC RIIE
Sbjct: 59  DDDIESPVLSTEEIVELYEDVLSELIINSKPIITDLTIIAGEQRGHGAGIADAICARIIE 118

Query: 20  VPVEQK 3
           VPVEQK
Sbjct: 119 VPVEQK 124


>XP_011037706.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X5 [Populus euphratica]
          Length = 1035

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = -3

Query: 236 RGLIKEMVHDQEEDDQNHVG--LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMH 63
           R L+K+      EDD    G  LS +D+V +Y+ +L+EL+ NSK II +LT+IAGEQR H
Sbjct: 44  RSLLKQRQGSAVEDDGGGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREH 103

Query: 62  GAGIADVICDRIIEVPVEQK 3
           G GIADV+C RI+E PV+QK
Sbjct: 104 GEGIADVLCARIVEAPVDQK 123


>XP_011037705.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X4 [Populus euphratica]
          Length = 1051

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = -3

Query: 236 RGLIKEMVHDQEEDDQNHVG--LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMH 63
           R L+K+      EDD    G  LS +D+V +Y+ +L+EL+ NSK II +LT+IAGEQR H
Sbjct: 44  RSLLKQRQGSAVEDDGGGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREH 103

Query: 62  GAGIADVICDRIIEVPVEQK 3
           G GIADV+C RI+E PV+QK
Sbjct: 104 GEGIADVLCARIVEAPVDQK 123


>XP_011037702.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Populus euphratica] XP_011037703.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X2 [Populus euphratica] XP_011037704.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X3 [Populus euphratica]
          Length = 1053

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = -3

Query: 236 RGLIKEMVHDQEEDDQNHVG--LSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMH 63
           R L+K+      EDD    G  LS +D+V +Y+ +L+EL+ NSK II +LT+IAGEQR H
Sbjct: 44  RSLLKQRQGSAVEDDGGGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREH 103

Query: 62  GAGIADVICDRIIEVPVEQK 3
           G GIADV+C RI+E PV+QK
Sbjct: 104 GEGIADVLCARIVEAPVDQK 123


>OAY24701.1 hypothetical protein MANES_17G036600 [Manihot esculenta]
          Length = 1027

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDDIVFLYDVILSELSVNSKAIINELTVIAGEQRMHGAGIAD 45
           +E+    E+DD     LS ++IV LY+++L EL+ NSK +IN+LT++AGE R HG GIAD
Sbjct: 47  EEVRFSAEDDDVAVPSLSTEEIVQLYELMLDELTFNSKPLINDLTIVAGELREHGEGIAD 106

Query: 44  VICDRIIEVPVEQK 3
            IC RIIEVPVEQK
Sbjct: 107 AICARIIEVPVEQK 120


>XP_017645983.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium arboreum]
          Length = 1001

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>XP_016753658.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X3 [Gossypium hirsutum]
          Length = 1001

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>XP_016753657.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Gossypium hirsutum]
          Length = 1004

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>XP_017645981.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Gossypium arboreum] KHG24664.1 Pre-mRNA cleavage
           complex 2 Pcf11 [Gossypium arboreum]
          Length = 1004

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>XP_016753656.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Gossypium hirsutum]
          Length = 1024

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>KJB67157.1 hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 831

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>XP_012450329.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Gossypium raimondii]
          Length = 1001

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101


>XP_016683609.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Gossypium hirsutum]
          Length = 1004

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -3

Query: 224 KEMVHDQEEDDQNHVGLSGDD--------IVFLYDVILSELSVNSKAIINELTVIAGEQR 69
           K ++  +E++ +   G++ DD        IV LY+V+LSEL+ NSK II +LT+IAGEQR
Sbjct: 20  KALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTIIAGEQR 79

Query: 68  MHGAGIADVICDRIIEVPVEQK 3
            HG GIAD IC RIIEVPVEQK
Sbjct: 80  EHGEGIADAICARIIEVPVEQK 101