BLASTX nr result
ID: Lithospermum23_contig00036703
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00036703
(286 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OMO73140.1 Integrase, catalytic core [Corchorus capsularis] 74 2e-13
JAU21749.1 putative mitochondrial protein, partial [Noccaea caer... 69 2e-13
CAN65591.1 hypothetical protein VITISV_042091 [Vitis vinifera] 73 6e-13
OMO94717.1 Integrase, catalytic core [Corchorus capsularis] 72 8e-13
KYP63539.1 Retrovirus-related Pol polyprotein from transposon TN... 70 2e-12
XP_018814598.1 PREDICTED: uncharacterized protein LOC108986442, ... 70 3e-12
KYP63543.1 Retrovirus-related Pol polyprotein from transposon TN... 70 3e-12
KYP35109.1 Retrovirus-related Pol polyprotein from transposon TN... 70 3e-12
OMO81232.1 Reverse transcriptase, RNA-dependent DNA polymerase [... 70 5e-12
XP_018822974.1 PREDICTED: uncharacterized protein LOC108992786 [... 69 9e-12
KHN45997.1 Retrovirus-related Pol polyprotein from transposon TN... 69 9e-12
KHN30958.1 Retrovirus-related Pol polyprotein from transposon TN... 69 9e-12
KHN17953.1 Retrovirus-related Pol polyprotein from transposon TN... 69 9e-12
KFK44388.1 hypothetical protein AALP_AA1G251100, partial [Arabis... 69 1e-11
KHN05629.1 Retrovirus-related Pol polyprotein from transposon TN... 69 2e-11
XP_013690295.1 PREDICTED: uncharacterized protein LOC106394259 [... 69 2e-11
KYP46589.1 Retrovirus-related Pol polyprotein from transposon TN... 68 2e-11
KYP58488.1 Retrovirus-related Pol polyprotein from transposon TN... 68 3e-11
CAN69566.1 hypothetical protein VITISV_033535 [Vitis vinifera] 67 6e-11
CAN81355.1 hypothetical protein VITISV_039158 [Vitis vinifera] 67 6e-11
>OMO73140.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1398
Score = 74.3 bits (181), Expect = 2e-13
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WH RLGHP I + ++F P + C +C K KL FHLS+ S +PLE ++
Sbjct: 443 WHSRLGHPSKSILCHVVNKFELPSTPVKDFVCTACQCSKSHKLPFHLSSLSSSRPLELLY 502
Query: 225 SDL*GLAPQMSTEGFKYFII 284
SD+ G +PQ+S +G+ Y+II
Sbjct: 503 SDIWGPSPQISIDGYSYYII 522
>JAU21749.1 putative mitochondrial protein, partial [Noccaea caerulescens]
Length = 100
Score = 69.3 bits (168), Expect = 2e-13
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLS--CMSCPMGKLSKLSFHLSNKRSFKPLEF 218
WH RLGHP + K SQFN P S ++ C +C + K+ KL F S +S +PL+
Sbjct: 16 WHSRLGHPAIAVLNKTISQFNLPVSSNVLMAQLCSACSINKMHKLPFSSSTLQSVRPLDI 75
Query: 219 IFSDL*GLAPQMSTEGFKYFII 284
+FSD+ +P +S +GFKY++I
Sbjct: 76 VFSDV-WTSPLISIDGFKYYVI 96
>CAN65591.1 hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 72.8 bits (177), Expect = 6e-13
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFN---FPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLE 215
WHHRLGHP RIF+ L + N +P +SF + C SC K KL F +S+ RS L+
Sbjct: 451 WHHRLGHPSSRIFQFLIRKHNLQIYPTESFHNFFCESCLCNKSHKLPFGVSSLRSRGXLD 510
Query: 216 FIFSDL*GLAPQMSTEGFKYFII 284
++SD+ G +P S +GF+Y++I
Sbjct: 511 LVYSDVWGPSPIESIDGFRYYLI 533
>OMO94717.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1198
Score = 72.4 bits (176), Expect = 8e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WH+RLGHP + ++ +QF S ++ C +C K KLSF LS+ S +PLE I+
Sbjct: 317 WHNRLGHPSKSVLGQVVNQFELSSASNKNFLCTACQCSKSHKLSFALSSLTSSRPLETIY 376
Query: 225 SDL*GLAPQMSTEGFKYFII 284
SD+ APQ+S +GF Y+II
Sbjct: 377 SDVWVPAPQISMDGFSYYII 396
>KYP63539.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 277
Score = 70.1 bits (170), Expect = 2e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF + F+ F+ C SC + K KL FH S +S PLE IF
Sbjct: 132 WHHRLGHPSSSIFTFIQQHFSLGSNKFQQSDCNSCQISKSHKLPFHESTLKSSYPLEIIF 191
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 192 SDV-WTSPVLSIDGLRYY 208
>XP_018814598.1 PREDICTED: uncharacterized protein LOC108986442, partial [Juglans
regia]
Length = 355
Score = 70.5 bits (171), Expect = 3e-12
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKS-FESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFI 221
WH RLGHP ++ ++ S++N P S S SC +C K +L F S++ S +PL+ I
Sbjct: 112 WHSRLGHPSLQLVSRIISKYNLPASSPSTSTSCSACRAAKSHQLPFKSSHQHSSRPLQLI 171
Query: 222 FSDL*GLAPQMSTEGFKYFI 281
++D+ G AP +S EGFKY++
Sbjct: 172 YTDVWGPAPVLSREGFKYYV 191
>KYP63543.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 373
Score = 70.5 bits (171), Expect = 3e-12
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF + +F+ F+ C SC + K KL FH S +S PLE IF
Sbjct: 18 WHHRLGHPSSSIFTFIQQRFSLGSNKFQQSDCNSCQISKSHKLPFHESTLKSSYPLEIIF 77
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 78 SDV-WTSPVLSIDGLRYY 94
>KYP35109.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 321
Score = 70.1 bits (170), Expect = 3e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF + F+ F+ C SC + K KL FH S +S PLE IF
Sbjct: 163 WHHRLGHPSSSIFTFIQQHFSLGSNKFQQSDCNSCQISKSHKLPFHESTLKSSYPLEIIF 222
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 223 SDV-WTSPVLSIDGLRYY 239
>OMO81232.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
capsularis]
Length = 1619
Score = 70.1 bits (170), Expect = 5e-12
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WH RLGHP I ++ QF+ P S + SC SC K KL F +S+ S KPLE ++
Sbjct: 414 WHQRLGHPSKLILHRVLKQFSLPQISNDFQSCNSCHCNKSHKLPFGVSSLSSSKPLELVY 473
Query: 225 SDL*GLAPQMSTEGFKYFI 281
+D+ G AP S G KY++
Sbjct: 474 TDIWGPAPIPSVSGHKYYL 492
>XP_018822974.1 PREDICTED: uncharacterized protein LOC108992786 [Juglans regia]
Length = 620
Score = 69.3 bits (168), Expect = 9e-12
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESL-SCMSCPMGKLSKLSFHLSNKRSFKPLEFI 221
WH RLGHP ++ ++ S++ P ++ SC +C K +L F+ S++ SFKPL+ I
Sbjct: 461 WHSRLGHPSLQLVSRIISKYQLPASIQSTVPSCSACRAAKSHQLPFNSSHQHSFKPLQLI 520
Query: 222 FSDL*GLAPQMSTEGFKYF 278
++D+ G AP +S EGFKY+
Sbjct: 521 YTDVWGPAPVLSREGFKYY 539
>KHN45997.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1235
Score = 69.3 bits (168), Expect = 9e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF+ + F+ F C SC + K KL FH S +S PLE IF
Sbjct: 367 WHHRLGHPSSSIFKFVQKHFSLGSNKFPQSDCNSCQISKSHKLPFHESTLKSCYPLEIIF 426
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 427 SDV-WTSPILSIDGLRYY 443
>KHN30958.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1237
Score = 69.3 bits (168), Expect = 9e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF+ + F+ F C SC + K KL FH S +S PLE IF
Sbjct: 369 WHHRLGHPSSSIFKFVQKHFSLGSNKFPQSDCNSCQISKSHKLPFHESTLKSCYPLEIIF 428
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 429 SDV-WTSPILSIDGLRYY 445
>KHN17953.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Glycine soja]
Length = 1294
Score = 69.3 bits (168), Expect = 9e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF+ + F+ F C SC + K KL FH S +S PLE IF
Sbjct: 380 WHHRLGHPSSSIFKFVQKHFSLGSNKFPQSDCNSCQISKSHKLPFHESTLKSCYPLEIIF 439
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 440 SDV-WTSPILSIDGLRYY 456
>KFK44388.1 hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
Length = 2090
Score = 68.9 bits (167), Expect = 1e-11
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFP--PKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEF 218
WH RLGHP IF + S+F+ P +S + LSC C + K K+ F S S KPLE+
Sbjct: 482 WHSRLGHPSSLIFNNIVSRFSIPISKQSSQPLSCSDCFINKTHKIPFSKSTITSSKPLEY 541
Query: 219 IFSDL*GLAPQMSTEGFKYFII 284
I+SD+ +P +S E FKY++I
Sbjct: 542 IYSDV-WSSPILSLENFKYYLI 562
Score = 58.9 bits (141), Expect = 4e-08
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFP--PKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEF 218
WH RLGHP IF + S+F+ P +S + LSC C + K K+ F S S KPLE+
Sbjct: 1542 WHSRLGHPSSLIFNNIVSRFSIPISKQSSQPLSCSDCFINKTHKIPFSKSTITSSKPLEY 1601
Query: 219 IFSDL 233
I+SD+
Sbjct: 1602 IYSDV 1606
>KHN05629.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 1248
Score = 68.6 bits (166), Expect = 2e-11
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHHRLGHP IF+ + F+ F C SC + K KL FH S +S PLE IF
Sbjct: 369 WHHRLGHPSSSIFKFVQKHFSLGSNKFLQSGCNSCQISKSHKLPFHESTLKSCYPLEIIF 428
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 429 SDV-WTSPILSIDGLRYY 445
>XP_013690295.1 PREDICTED: uncharacterized protein LOC106394259 [Brassica napus]
Length = 2800
Score = 68.6 bits (166), Expect = 2e-11
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +3
Query: 42 MWHHRLGHPIDRIFRKLSS----QFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKP 209
+WH RLGHP D++ + LS+ FN K+ +S+ C SC +GK +L F S+ RS +P
Sbjct: 462 VWHKRLGHPNDQVLKHLSTIKAISFN---KTSQSM-CESCQLGKTCRLPFSSSDFRSSRP 517
Query: 210 LEFIFSDL*GLAPQMSTEGFKYFII 284
LE I D+ G AP +ST+GF+++++
Sbjct: 518 LERIHCDVWGPAPVVSTQGFRFYVV 542
Score = 68.6 bits (166), Expect = 2e-11
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +3
Query: 42 MWHHRLGHPIDRIFRKLSS----QFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKP 209
+WH RLGHP D++ + LS+ FN K+ +S+ C SC +GK +L F S+ RS +P
Sbjct: 1851 VWHKRLGHPNDQVLKHLSTIKAISFN---KTSQSM-CESCQLGKTCRLPFSSSDFRSSRP 1906
Query: 210 LEFIFSDL*GLAPQMSTEGFKYFII 284
LE I D+ G AP +ST+GF+++++
Sbjct: 1907 LERIHCDVWGPAPVVSTQGFRFYVV 1931
>KYP46589.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 308
Score = 67.8 bits (164), Expect = 2e-11
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WHH LGHP + IF L S K+ + C+SC + K KLSF S+ S KPL+ ++
Sbjct: 128 WHHILGHPSEHIFNHLISLHKI--KAQPTAPCVSCSISKSHKLSFSSSSLHSKKPLDLVY 185
Query: 225 SDL*GLAPQMSTEGFKYFII 284
+D+ G AP S +GF Y++I
Sbjct: 186 TDVWGPAPVRSLDGFLYYLI 205
>KYP58488.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 625
Score = 67.8 bits (164), Expect = 3e-11
Identities = 32/78 (41%), Positives = 44/78 (56%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFIF 224
WH+RLGHP IF + F+ F+ C SC + K KL FH S +S PLE IF
Sbjct: 97 WHYRLGHPSSSIFTFIQQHFSLGSNKFQQSDCNSCQISKSHKLPFHESTLKSSYPLEIIF 156
Query: 225 SDL*GLAPQMSTEGFKYF 278
SD+ +P +S +G +Y+
Sbjct: 157 SDV-WTSPVLSIDGLRYY 173
>CAN69566.1 hypothetical protein VITISV_033535 [Vitis vinifera]
Length = 1390
Score = 67.0 bits (162), Expect = 6e-11
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +3
Query: 45 WHHRLGHPIDRIFRKLSSQFNFPPKSFESL-SCMSCPMGKLSKLSFHLSNKRSFKPLEFI 221
WHHRL HP ++ +N P SF+SL SC+ C K KL F +++ S PLE++
Sbjct: 721 WHHRLCHPAXKLLLSXLXSYNLPMSSFKSLLSCIXCHCNKSHKLPFSVASLTSHAPLEYL 780
Query: 222 FSDL*GLAPQMSTEGFKYFII 284
++++ G +P S +G++Y+++
Sbjct: 781 YANVWGPSPVPSVDGYQYYVL 801
>CAN81355.1 hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 67.0 bits (162), Expect = 6e-11
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 42 MWHHRLGHPIDRIFRKLSSQFNFPPKSFESLSCMSCPMGKLSKLSFHLSNKRSFKPLEFI 221
+WHHRLGH I ++ N +++ C SC + K +L HLS+ + KPLE +
Sbjct: 485 LWHHRLGHAATDIVTRIMHNCNVSCGKYKATVCSSCQLAKSHRLPTHLSSFHASKPLELV 544
Query: 222 FSDL*GLAPQMSTEGFKYFII 284
++D+ G A ST G KYFI+
Sbjct: 545 YTDIWGPASVTSTSGAKYFIL 565