BLASTX nr result
ID: Lithospermum23_contig00035976
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00035976
(217 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU85124.1 Retrovirus-related Pol polyprotein from transposon TN... 132 3e-37
BAA22288.1 polyprotein [Oryza australiensis] 129 4e-33
CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group] 126 3e-32
CAE02400.1 OSJNBa0024J22.4 [Oryza sativa Japonica Group] CAD4052... 126 3e-32
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 125 5e-32
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group] 125 7e-32
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass... 125 7e-32
EMT06479.1 hypothetical protein F775_22266 [Aegilops tauschii] 124 1e-31
EMS47553.1 Glutamyl-tRNA reductase 1, chloroplastic [Triticum ur... 124 2e-31
AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass... 124 2e-31
AAM74249.1 Putative retroelement [Oryza sativa Japonica Group] 124 2e-31
ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass... 124 2e-31
OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis tha... 120 2e-31
AAB42154.1 ORF [Hordeum vulgare subsp. vulgare] 115 3e-31
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group] 123 3e-31
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass... 123 3e-31
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 123 3e-31
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 123 3e-31
EMT12108.1 hypothetical protein F775_04960 [Aegilops tauschii] 122 6e-31
ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass... 122 8e-31
>JAU85124.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 222
Score = 132 bits (332), Expect = 3e-37
Identities = 59/72 (81%), Positives = 68/72 (94%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGN+ ++KARLV KG+KQ+HG+DYDETYSPVAMLKSIRI+LA AA++DYEIWQMDVKT
Sbjct: 73 DMDGNIQIYKARLVAKGYKQIHGIDYDETYSPVAMLKSIRILLATAAYYDYEIWQMDVKT 132
Query: 36 AFLNGNLEEDVY 1
AFLNGNLEEDVY
Sbjct: 133 AFLNGNLEEDVY 144
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 129 bits (323), Expect = 4e-33
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGFKQ+ GVDYDET+SPVAMLKSIRIILAIAA+ DYEIWQMDVKT
Sbjct: 850 DMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKT 909
Query: 36 AFLNGNLEEDVY 1
AFLNGNL EDVY
Sbjct: 910 AFLNGNLSEDVY 921
>CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 126 bits (317), Expect = 3e-32
Identities = 58/72 (80%), Positives = 67/72 (93%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLVVKGF+Q+ GVDYDET+SP AMLKSIRI+LA+AA+ DYEIWQMDVKT
Sbjct: 559 DVDGNVYIYKARLVVKGFRQIQGVDYDETFSPAAMLKSIRIVLAVAAYFDYEIWQMDVKT 618
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+EDVY
Sbjct: 619 AFLNGNLDEDVY 630
>CAE02400.1 OSJNBa0024J22.4 [Oryza sativa Japonica Group] CAD40526.2
OSJNBa0023J03.14 [Oryza sativa Japonica Group]
CAH66059.1 OSIGBa0125J07.8 [Oryza sativa Indica Group]
CAH66155.1 OSIGBa0113B06.1 [Oryza sativa Indica Group]
Length = 704
Score = 126 bits (316), Expect = 3e-32
Identities = 58/72 (80%), Positives = 67/72 (93%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+SPVA+LKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 356 DVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAILKSIRIVLAIAAYFDYEIWQMDVKT 415
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+EDVY
Sbjct: 416 AFLNGNLDEDVY 427
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 125 bits (315), Expect = 5e-32
Identities = 58/72 (80%), Positives = 65/72 (90%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGN+ ++KA LV KG+KQVHG+DYDETYSPVAMLKSIRI+LA AA +DYEIWQMDVKT
Sbjct: 497 DMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKT 556
Query: 36 AFLNGNLEEDVY 1
AFLNGNLEE VY
Sbjct: 557 AFLNGNLEEHVY 568
>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 125 bits (314), Expect = 7e-32
Identities = 58/72 (80%), Positives = 66/72 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+ PVAMLKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 715 DVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKT 774
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+EDVY
Sbjct: 775 AFLNGNLDEDVY 786
>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 125 bits (314), Expect = 7e-32
Identities = 58/72 (80%), Positives = 66/72 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+ PVAMLKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 773 DVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKT 832
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+EDVY
Sbjct: 833 AFLNGNLDEDVY 844
>EMT06479.1 hypothetical protein F775_22266 [Aegilops tauschii]
Length = 898
Score = 124 bits (312), Expect = 1e-31
Identities = 58/72 (80%), Positives = 67/72 (93%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV V+KARLV KGF+QV G+DYDET+SPVAMLKS+RI+LAIAAF+DYEIWQMDVKT
Sbjct: 808 DADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKT 867
Query: 36 AFLNGNLEEDVY 1
AFLNG LEE++Y
Sbjct: 868 AFLNGFLEEELY 879
>EMS47553.1 Glutamyl-tRNA reductase 1, chloroplastic [Triticum urartu]
Length = 637
Score = 124 bits (310), Expect = 2e-31
Identities = 56/72 (77%), Positives = 67/72 (93%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGN+ ++KARLV KGF+QV G+DYDET+SPVAMLKS+RI+LAIAAF+DYEIWQMDVKT
Sbjct: 66 DADGNITIYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKT 125
Query: 36 AFLNGNLEEDVY 1
AFLNG LEE++Y
Sbjct: 126 AFLNGFLEEELY 137
>AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 124 bits (310), Expect = 2e-31
Identities = 57/72 (79%), Positives = 67/72 (93%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GV+YDET+SPVAMLKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 359 DVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKT 418
Query: 36 AFLNGNLEEDVY 1
AFL+GNL+EDVY
Sbjct: 419 AFLSGNLDEDVY 430
>AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 124 bits (310), Expect = 2e-31
Identities = 57/72 (79%), Positives = 67/72 (93%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GV+YDET+SPVAMLKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 404 DVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKT 463
Query: 36 AFLNGNLEEDVY 1
AFL+GNL+EDVY
Sbjct: 464 AFLSGNLDEDVY 475
>ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 124 bits (310), Expect = 2e-31
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+SPVAMLKSIRI+L IAA+ DYEIWQMDVKT
Sbjct: 556 DVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLTIAAYFDYEIWQMDVKT 615
Query: 36 AFLNGNLEEDVY 1
A LNGNL+EDVY
Sbjct: 616 ALLNGNLDEDVY 627
>OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis thaliana]
Length = 370
Score = 120 bits (302), Expect = 2e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGN+ ++KARLV KGFKQ+HG+DYDETYSPVAMLKS RI+LA AA +DYEIWQMD+KT
Sbjct: 303 DMDGNIQIYKARLVAKGFKQIHGIDYDETYSPVAMLKSFRILLATAAHYDYEIWQMDLKT 362
Query: 36 AFLNGNLE 13
AFLNGNLE
Sbjct: 363 AFLNGNLE 370
>AAB42154.1 ORF [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 115 bits (287), Expect = 3e-31
Identities = 52/72 (72%), Positives = 64/72 (88%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D + NV V+KARLV KGF+Q+ GVDY+ET+SPV LKS+RI+LAIA F+DYEIWQMDVKT
Sbjct: 66 DANDNVTVYKARLVAKGFRQIQGVDYEETFSPVVKLKSVRIMLAIATFYDYEIWQMDVKT 125
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+E++Y
Sbjct: 126 AFLNGNLKEELY 137
>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 123 bits (309), Expect = 3e-31
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+SPVAMLKSIRI+LAIAA+ DYEIWQM+VKT
Sbjct: 770 DVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKT 829
Query: 36 AFLNGNLEEDVY 1
AFLNGN +EDVY
Sbjct: 830 AFLNGNHDEDVY 841
>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 123 bits (309), Expect = 3e-31
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+SPVAMLKSIRI+LAIAA+ DYEIWQM+VKT
Sbjct: 780 DVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKT 839
Query: 36 AFLNGNLEEDVY 1
AFLNGN +EDVY
Sbjct: 840 AFLNGNHDEDVY 851
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 123 bits (309), Expect = 3e-31
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DG V ++ ARLV KGF+Q+ GVDYDET+SPVAMLKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 712 DVDGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKT 771
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+EDVY
Sbjct: 772 AFLNGNLDEDVY 783
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 123 bits (309), Expect = 3e-31
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DG V ++ ARLV KGF+Q+ GVDYDET+SPVAMLKSIRI+LAIAA+ DYEIWQMDVKT
Sbjct: 799 DVDGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKT 858
Query: 36 AFLNGNLEEDVY 1
AFLNGNL+EDVY
Sbjct: 859 AFLNGNLDEDVY 870
>EMT12108.1 hypothetical protein F775_04960 [Aegilops tauschii]
Length = 610
Score = 122 bits (306), Expect = 6e-31
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV V+KARLV KGF+QV G+DYDET+SPVAMLKS+RI+LAIAAF+DYEIWQMDVKT
Sbjct: 49 DADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKT 108
Query: 36 AFLNGNLEEDVY 1
AFLNG LEE+ +
Sbjct: 109 AFLNGFLEEEFF 120
>ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 122 bits (306), Expect = 8e-31
Identities = 56/72 (77%), Positives = 65/72 (90%)
Frame = -2
Query: 216 DKDGNVDVFKARLVVKGFKQVHGVDYDETYSPVAMLKSIRIILAIAAFHDYEIWQMDVKT 37
D DGNV ++KARLV KGF+Q+ GVDYDET+SP AMLKSIRI+LAIAA+ +YEIWQMDVKT
Sbjct: 635 DVDGNVHIYKARLVAKGFRQIQGVDYDETFSPFAMLKSIRIVLAIAAYFNYEIWQMDVKT 694
Query: 36 AFLNGNLEEDVY 1
FLNGNL+EDVY
Sbjct: 695 TFLNGNLDEDVY 706