BLASTX nr result

ID: Lithospermum23_contig00035433 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00035433
         (315 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015081028.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   3e-06
XP_004243819.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   9e-06

>XP_015081028.1 PREDICTED: pentatricopeptide repeat-containing protein At3g58590
           [Solanum pennellii] XP_015081029.1 PREDICTED:
           pentatricopeptide repeat-containing protein At3g58590
           [Solanum pennellii]
          Length = 753

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 49  SKTHNWLNPLRQNIEQLRLHQLLEDLSWVKSLAATKSLHAITTTLGSNRVQPTIFLHNNT 228
           SK   + +    NI+  RL QLL++ +W++SL  TK+LHA+T T+G +  QP  FL NNT
Sbjct: 11  SKFSKYFSNNGDNIKHQRLIQLLQEPNWIQSLDETKALHALTITMGQDPTQP--FLANNT 68

Query: 229 IS-KNTYFEIVLL*RKI 276
           I  K + F  + + RK+
Sbjct: 69  IMFKYSIFGDICIARKV 85


>XP_004243819.1 PREDICTED: pentatricopeptide repeat-containing protein At3g58590
           [Solanum lycopersicum]
          Length = 753

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 49  SKTHNWLNPLRQNIEQLRLHQLLEDLSWVKSLAATKSLHAITTTLGSNRVQPTIFLHNNT 228
           SK   + +    NI+  RL QLL++ +W++SL  TK+LHA+T T+G +  QP  FL NNT
Sbjct: 11  SKFSKYFSNNGDNIKPQRLIQLLQEPNWIQSLDETKALHALTITIGQDPTQP--FLANNT 68

Query: 229 IS-KNTYFEIVLL*RKI 276
           I  + + F  + + RK+
Sbjct: 69  IMFRYSIFGDICIARKV 85


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