BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00035248
         (323 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...    63   2e-09
XP_008351909.1 PREDICTED: transcription initiation factor TFIID ...    58   1e-07
OAE21435.1 hypothetical protein AXG93_3506s1090 [Marchantia poly...    58   2e-07
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN...    57   3e-07
KYP38865.1 Retrovirus-related Pol polyprotein from transposon TN...    55   7e-07
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN...    56   8e-07
KYP69065.1 Retrovirus-related Pol polyprotein from transposon TN...    55   9e-07
KYP69992.1 Retrovirus-related Pol polyprotein from transposon TN...    55   9e-07
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...    55   1e-06
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...    55   1e-06
CAN60994.1 hypothetical protein VITISV_036935 [Vitis vinifera]         54   1e-06
CAN62092.1 hypothetical protein VITISV_022473 [Vitis vinifera]         54   5e-06
KHN35566.1 Retrovirus-related Pol polyprotein from transposon TN...    51   5e-06
KYP59893.1 Retrovirus-related Pol polyprotein from transposon TN...    53   7e-06
KYP46254.1 Retrovirus-related Pol polyprotein from transposon TN...    53   7e-06
KYP58145.1 Retrovirus-related Pol polyprotein from transposon TN...    53   7e-06
KYP31293.1 Retrovirus-related Pol polyprotein from transposon TN...    53   9e-06
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN...    53   1e-05

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVE 106
           GLWLKLESLYMTKS+TNKLLLKQRLF LRM EG +
Sbjct: 80  GLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQ 114


>XP_008351909.1 PREDICTED: transcription initiation factor TFIID subunit 2-like
           [Malus domestica]
          Length = 454

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERG 112
           GLWLKLES+YMTKS+TN+L LKQRL+ LRM EG   G
Sbjct: 82  GLWLKLESIYMTKSLTNRLYLKQRLYTLRMTEGHGEG 118


>OAE21435.1 hypothetical protein AXG93_3506s1090 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 508

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           LWLKLESLYMTKS+ +KL+LKQRLF LRM EG    K H+D
Sbjct: 60  LWLKLESLYMTKSLASKLMLKQRLFTLRMNEGTTL-KDHLD 99


>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 57.0 bits (136), Expect = 3e-07
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEG 100
           G+WLKLESLYMTKS+TNKL LK+RL +L+M+EG
Sbjct: 82  GIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEG 114


>KYP38865.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan] KYP38876.1 Retrovirus-related Pol
           polyprotein from transposon TNT 1-94 [Cajanus cajan]
          Length = 212

 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           GLWLKLE LYMTKS+ NKL+LK+RLF L M+E     K H+D
Sbjct: 70  GLWLKLEKLYMTKSVCNKLMLKRRLFGLHMKESTSL-KEHLD 110


>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Anthurium amnicola]
          Length = 529

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           LWLKLESLYMTKS+T+KL LKQRLF L+M EG    K H+D
Sbjct: 83  LWLKLESLYMTKSLTSKLHLKQRLFMLKMVEGTS-VKTHLD 122


>KYP69065.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 285

 Score = 55.5 bits (132), Expect = 9e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           GLWLKLE LYMTKS+ NKLLLK+RLF L M+E     K H+D
Sbjct: 70  GLWLKLEKLYMTKSICNKLLLKRRLFGLHMKESTPL-KEHLD 110


>KYP69992.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score = 55.5 bits (132), Expect = 9e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           GLWLKLE LYMTKS+ NKLLLK+RLF L M+E     K H+D
Sbjct: 92  GLWLKLEKLYMTKSICNKLLLKRRLFGLHMKESTPL-KEHLD 132


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           GLW KLE LYMTKS+ NKLLLK+RLF L M+EG    K H+D
Sbjct: 94  GLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGTPL-KDHLD 134


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           GLW KLE LYMTKS+ NKLLLK+RLF L M+EG    K H+D
Sbjct: 94  GLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGTPL-KDHLD 134


>CAN60994.1 hypothetical protein VITISV_036935 [Vitis vinifera]
          Length = 209

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           LWLKLESLYMTKS+TN L LK  L+ L+M+EG    K H+D
Sbjct: 35  LWLKLESLYMTKSLTNLLNLKNWLYTLQMKEGTSTIKNHLD 75


>CAN62092.1 hypothetical protein VITISV_022473 [Vitis vinifera]
          Length = 318

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD 127
           LWL+LESLYMTKS+TN+L LK+RL+ L+M+E   + K H D
Sbjct: 38  LWLRLESLYMTKSLTNRLYLKKRLYTLQMKEDTIQIKTHDD 78


>KHN35566.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 119

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 25/62 (40%), Positives = 42/62 (67%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEGVERGKRHMD*IGEAYIILLAKVSNYFTG 184
           +WLKLESLYMTKS+ N+L LKQRL+  +M  G +  + H+D   +  ++LL+ + + +  
Sbjct: 16  VWLKLESLYMTKSLANRLFLKQRLYTFKMPSG-KSLEDHLDEDEDQALLLLSSLPSEYNS 74

Query: 185 VN 190
           ++
Sbjct: 75  LS 76


>KYP59893.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQE 97
           GLWLKLE LYMTKS+ NKLLLK+RLF L M+E
Sbjct: 70  GLWLKLEKLYMTKSICNKLLLKRRLFGLHMKE 101


>KYP46254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQE 97
           GLWLKLE LYMTKS+ NKLLLK+RLF L M+E
Sbjct: 18  GLWLKLEKLYMTKSICNKLLLKRRLFGLHMKE 49


>KYP58145.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEG 100
           LWLKLESLYMTKS+ NKL LK+RL+ +RM EG
Sbjct: 61  LWLKLESLYMTKSLANKLRLKERLYTIRMVEG 92


>KYP31293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 569

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   GLWLKLESLYMTKSMTNKLLLKQRLFELRMQE 97
           GLWLKLE LYMTKS+ NKLLLK+RLF L M+E
Sbjct: 26  GLWLKLEKLYMTKSIYNKLLLKRRLFGLHMKE 57


>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +2

Query: 5   LWLKLESLYMTKSMTNKLLLKQRLFELRMQEG 100
           LWLKLESLYMTKS+ NKL LK+RL+ +RM EG
Sbjct: 85  LWLKLESLYMTKSLANKLRLKERLYTIRMVEG 116