BLASTX nr result
ID: Lithospermum23_contig00035077
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00035077
(333 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t... 105 5e-24
KYP69326.1 Retrovirus-related Pol polyprotein from transposon TN... 103 5e-24
KYP68590.1 Retrovirus-related Pol polyprotein from transposon TN... 103 1e-23
CAH66031.1 H0515C11.7 [Oryza sativa Indica Group] 100 1e-23
XP_012069914.1 PREDICTED: retrovirus-related Pol polyprotein fro... 103 2e-23
KYP48282.1 Retrovirus-related Pol polyprotein from transposon TN... 103 2e-23
ABA98804.1 retrotransposon protein, putative, Ty1-copia subclass... 102 4e-23
CAH66122.1 OSIGBa0146N20.7 [Oryza sativa Indica Group] 102 4e-23
CAN68815.1 hypothetical protein VITISV_001087 [Vitis vinifera] 100 6e-23
ABA98656.1 retrotransposon protein, putative, Ty1-copia subclass... 101 1e-22
AAX92861.1 retrotransposon protein, putative, Ty1-copia sub-clas... 101 1e-22
CAN67337.1 hypothetical protein VITISV_004415 [Vitis vinifera] 98 1e-22
ABG22119.1 polyprotein, partial [Cynara cardunculus var. scolymus] 99 1e-22
AAL91607.1 Putative pol polyprotein [Oryza sativa Japonica Group... 100 3e-22
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN... 100 3e-22
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 100 3e-22
ABA97637.1 retrotransposon protein, putative, Ty1-copia subclass... 100 4e-22
AAL31093.1 putative retrotransposon-related protein [Oryza sativ... 99 5e-22
CAD40782.2 OSJNBb0012E08.6 [Oryza sativa Japonica Group] 98 6e-22
AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-clas... 99 1e-21
>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease CAA32025.1 unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 105 bits (261), Expect = 5e-24
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CPTT EE M+++PY SAVG+LMYAM+CTR I A+GV+S++L NPGKEH E+VKWI+
Sbjct: 1096 CPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWIL 1155
Query: 247 KYLRGTTDKCIFAGGA 294
+YLRGTT C+ GG+
Sbjct: 1156 RYLRGTTGDCLCFGGS 1171
>KYP69326.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 389
Score = 103 bits (257), Expect = 5e-24
Identities = 43/73 (58%), Positives = 62/73 (84%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P T+EE +M+++PY SA+G+LMYAM+CTR IG A+GV+S+++SNPGK H E+VKWI++
Sbjct: 159 PQTEEERYFMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILR 218
Query: 250 YLRGTTDKCIFAG 288
YLRGTT++C+ G
Sbjct: 219 YLRGTTERCLHFG 231
>KYP68590.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 523
Score = 103 bits (257), Expect = 1e-23
Identities = 43/73 (58%), Positives = 62/73 (84%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P T+EE +M+++PY SA+G+LMYAM+CTR IG A+GV+S+++SNPGK H E+VKWI++
Sbjct: 293 PQTEEERYFMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILR 352
Query: 250 YLRGTTDKCIFAG 288
YLRGTT++C+ G
Sbjct: 353 YLRGTTERCLHFG 365
>CAH66031.1 H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 100 bits (250), Expect = 1e-23
Identities = 41/74 (55%), Positives = 60/74 (81%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
C +T E++EYMSR+PY SAVG+LMYAM+C+R + A+ ++S+Y++NPGKEH +++ WI
Sbjct: 62 CASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIF 121
Query: 247 KYLRGTTDKCIFAG 288
+YLRGTTD C+ G
Sbjct: 122 RYLRGTTDACLKFG 135
>XP_012069914.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Jatropha curcas]
Length = 622
Score = 103 bits (257), Expect = 2e-23
Identities = 44/71 (61%), Positives = 61/71 (85%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P T+EE + M++IPY SA+G+LMYAM+CTR IG A+GV+S+Y+SNPGK H E+VKWI++
Sbjct: 448 PQTEEERKDMAKIPYASAIGSLMYAMVCTRPDIGHAVGVVSRYMSNPGKAHWEAVKWILR 507
Query: 250 YLRGTTDKCIF 282
YLRGT +KC++
Sbjct: 508 YLRGTNEKCLY 518
>KYP48282.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 663
Score = 103 bits (257), Expect = 2e-23
Identities = 43/73 (58%), Positives = 62/73 (84%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P T+EE +M+++PY SA+G+LMYAM+CTR IG A+GV+S+++SNPGK H E+VKWI++
Sbjct: 490 PQTEEERYFMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILR 549
Query: 250 YLRGTTDKCIFAG 288
YLRGTT++C+ G
Sbjct: 550 YLRGTTERCLHFG 562
>ABA98804.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 102 bits (254), Expect = 4e-23
Identities = 44/74 (59%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CP+T EIEYMSR+PY SAVG+LMYAM+C+R + +A+ ++S+Y+SNPGKEH V+WI
Sbjct: 1102 CPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIF 1161
Query: 247 KYLRGTTDKCIFAG 288
+YLRGTT C+ G
Sbjct: 1162 RYLRGTTYSCLKFG 1175
>CAH66122.1 OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 102 bits (254), Expect = 4e-23
Identities = 43/74 (58%), Positives = 60/74 (81%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CP+T EIEYMSR+PY SAVG+LMYAM+C+R + +A+ ++S+Y+SNPGKEH +++WI
Sbjct: 1104 CPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIF 1163
Query: 247 KYLRGTTDKCIFAG 288
+YLRGTT C+ G
Sbjct: 1164 RYLRGTTYSCLKFG 1177
>CAN68815.1 hypothetical protein VITISV_001087 [Vitis vinifera]
Length = 325
Score = 99.8 bits (247), Expect = 6e-23
Identities = 42/75 (56%), Positives = 62/75 (82%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P TKEE ++MS++PY SA+G+LMYAM+CTR+ I A+GV+SK++S PGK+H E++KWI++
Sbjct: 63 PKTKEERDHMSKMPYASAIGSLMYAMVCTRSDIAHAVGVVSKFMSRPGKQHWEAIKWILR 122
Query: 250 YLRGTTDKCIFAGGA 294
YL+G+ D C+ GA
Sbjct: 123 YLKGSLDTCLCFIGA 137
>ABA98656.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 101 bits (251), Expect = 1e-22
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CP+ EIEYMSR+PY SAVG+LMYAM+C+R + +A+ ++S+Y+SNPGKEH +V+WI
Sbjct: 1102 CPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIF 1161
Query: 247 KYLRGTTDKCIFAG 288
+YLRGTT C+ G
Sbjct: 1162 RYLRGTTYSCLKFG 1175
>AAX92861.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA92739.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1373
Score = 101 bits (251), Expect = 1e-22
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CP+ EIEYMSR+PY SAVG+LMYAM+C+R + +A+ ++S+Y+SNPGKEH +V+WI
Sbjct: 1102 CPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIF 1161
Query: 247 KYLRGTTDKCIFAG 288
+YLRGTT C+ G
Sbjct: 1162 RYLRGTTYSCLKFG 1175
>CAN67337.1 hypothetical protein VITISV_004415 [Vitis vinifera]
Length = 281
Score = 98.2 bits (243), Expect = 1e-22
Identities = 41/75 (54%), Positives = 61/75 (81%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P T+EE ++MS++PY SA+G+LMYAM+CTR I A+GV+S+++S PGK+H E+VKWI++
Sbjct: 51 PKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILR 110
Query: 250 YLRGTTDKCIFAGGA 294
YL+G+ D C+ GA
Sbjct: 111 YLKGSLDTCLCFTGA 125
>ABG22119.1 polyprotein, partial [Cynara cardunculus var. scolymus]
Length = 358
Score = 99.4 bits (246), Expect = 1e-22
Identities = 41/74 (55%), Positives = 60/74 (81%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CP + EE EYMSR+PY SAVG+LMYAMICTR + +A+ ++S+Y++NPG+EH ++V+W++
Sbjct: 174 CPDSNEEKEYMSRVPYSSAVGSLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQWVL 233
Query: 247 KYLRGTTDKCIFAG 288
+YL GT D C+ G
Sbjct: 234 RYLSGTRDYCMCFG 247
>AAL91607.1 Putative pol polyprotein [Oryza sativa Japonica Group] AAL75759.1
Putative pol polyprotein [Oryza sativa Japonica Group]
AAP51772.1 retrotransposon protein, putative, Ty1-copia
subclass [Oryza sativa Japonica Group]
Length = 1005
Score = 100 bits (248), Expect = 3e-22
Identities = 41/74 (55%), Positives = 60/74 (81%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
C +T E++EYMSR+PY SAVG+LMYAM+C+R + A+ ++S+Y++NPGKEH ++V+WI
Sbjct: 774 CASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIF 833
Query: 247 KYLRGTTDKCIFAG 288
+YLRGT D C+ G
Sbjct: 834 RYLRGTADACLKFG 847
>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 100 bits (248), Expect = 3e-22
Identities = 42/70 (60%), Positives = 59/70 (84%)
Frame = +1
Query: 70 PTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWIIK 249
P T+EE E M++ PY SA+G+LMYAM+CTR IG+A+GV+S+++SNPGK H E+VKWI++
Sbjct: 1039 PKTEEEKELMAKTPYASAIGSLMYAMVCTRPDIGYAVGVVSRFMSNPGKAHWEAVKWILR 1098
Query: 250 YLRGTTDKCI 279
YLR T +KC+
Sbjct: 1099 YLRATKEKCL 1108
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 100 bits (248), Expect = 3e-22
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CPT +E+ MS IPY SAVG+LMYAM+CTR I A+GV+S+YLSNPGK H E+VKWI+
Sbjct: 1093 CPTIREK---MSTIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKTHWEAVKWIL 1149
Query: 247 KYLRGTTDKCIFAGGA 294
+YLRGT+ C+ GGA
Sbjct: 1150 RYLRGTSKLCLRFGGA 1165
>ABA97637.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 99.8 bits (247), Expect = 4e-22
Identities = 41/74 (55%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
C T E++EYMSR+PY SAVG+LMYAM+C+R + A+ ++S+Y++NPGKEH ++V+WI
Sbjct: 1091 CANTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAVQWIF 1150
Query: 247 KYLRGTTDKCIFAG 288
+YLRGT D C+ G
Sbjct: 1151 RYLRGTADACLKFG 1164
>AAL31093.1 putative retrotransposon-related protein [Oryza sativa Japonica
Group] AAN04164.1 Putative retrotransposon protein [Oryza
sativa Japonica Group] AAP53029.1 retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1229
Score = 99.4 bits (246), Expect = 5e-22
Identities = 40/74 (54%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
C +T E++EYMSR+PY S VG+LMYAM+C+R + A+ ++S+Y++NPGKEH ++V+WI
Sbjct: 1037 CTSTDEDVEYMSRVPYSSVVGSLMYAMVCSRPVLSHAMSLVSRYMANPGKEHWKAVQWIF 1096
Query: 247 KYLRGTTDKCIFAG 288
+YLRGT D C+ G
Sbjct: 1097 RYLRGTADACLKFG 1110
>CAD40782.2 OSJNBb0012E08.6 [Oryza sativa Japonica Group]
Length = 375
Score = 97.8 bits (242), Expect = 6e-22
Identities = 40/74 (54%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
C +T E++EYMSR+PY S VG+LMYAM+C+R + A+ ++S+Y++NPGKEH ++V+WI
Sbjct: 158 CASTDEDVEYMSRVPYSSDVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIF 217
Query: 247 KYLRGTTDKCIFAG 288
+YLRGT D C+ G
Sbjct: 218 RYLRGTADACLKFG 231
>AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA91548.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 2340
Score = 98.6 bits (244), Expect = 1e-21
Identities = 42/74 (56%), Positives = 59/74 (79%)
Frame = +1
Query: 67 CPTTKEEIEYMSRIPYVSAVGNLMYAMICTRAYIGFALGVMSKYLSNPGKEH*ESVKWII 246
CP + +IEYMSR+PY SAVG+LMYAM+C+R + AL V+S+Y++NPGKEH ++V+WI
Sbjct: 1308 CPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIF 1367
Query: 247 KYLRGTTDKCIFAG 288
+YLRGT+ C+ G
Sbjct: 1368 RYLRGTSSACLQFG 1381