BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00034820
         (232 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...    68   1e-11
OAE30778.1 hypothetical protein AXG93_4876s1190 [Marchantia poly...    53   2e-06
KYP36888.1 Retrovirus-related Pol polyprotein from transposon TN...    51   2e-06
XP_010106034.1 NAC domain-containing protein 78 [Morus notabilis...    53   2e-06
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...    52   6e-06
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...    52   6e-06
KYP50610.1 Retrovirus-related Pol polyprotein from transposon TN...    51   9e-06

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -3

Query: 164 SLKVEKFTGRNSFSLWQIKVRALLKREGLCTPLVKSVPDLEPENMASLEEKAHS 3
           ++K++KFTGRNSFSLWQIK+RALLK++G   PL K    +    MA LEEKAHS
Sbjct: 5   NVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEKAHS 58


>OAE30778.1 hypothetical protein AXG93_4876s1190 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 232

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -3

Query: 161 LKVEKFTGRNSFSLWQIKVRALLKREGLCTPLV--KSVPDLEPENMASLEEKAHS 3
           LK+EKFT   SFSLW+IK+ +LLK +G+  PL+  K   D+       +EEKAHS
Sbjct: 6   LKIEKFTEGYSFSLWKIKMESLLKSQGIWAPLIRDKGAMDVASSEYKLMEEKAHS 60


>KYP36888.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 101

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = -3

Query: 164 SLKVEKFTGRNSFSLWQIKVRALLKREGLCTPLVKSVPDLEPENMASLEEKAHS 3
           ++K+EKF G+N F+LW+IK+RALLK + +  PLV      + EN+A  EEK  S
Sbjct: 4   TIKIEKFNGKNIFNLWRIKMRALLKEQRVWGPLVS--VSAKKENIAKSEEKPTS 55


>XP_010106034.1 NAC domain-containing protein 78 [Morus notabilis] EXC07304.1 NAC
           domain-containing protein 78 [Morus notabilis]
          Length = 490

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = -3

Query: 215 TNWYQS*GYRRRDGW*KSLKVEKFTGRNSFSLWQIKVRALLKREGLCTPL--VKSVP-DL 45
           T WYQS  +R   G  K  ++EKFTG+N F+LW++K+RALL ++GL   L   K++P  L
Sbjct: 407 TIWYQSSWWRFGIGLSK-FEIEKFTGKNDFALWRLKIRALLVQQGLEVALSGEKNLPTTL 465

Query: 44  EPENMASLEEKAHS 3
             +    L +KAHS
Sbjct: 466 SEKEKKDLLDKAHS 479


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 13/67 (19%)
 Frame = -3

Query: 164 SLKVEKFTGRNSFSLWQIKVRALLKREGLCTPL----VKSVPDLEP---------ENMAS 24
           ++++EKF G+NSF+LW+IK+RALLK + +  PL    VK     EP         E +A 
Sbjct: 6   TIRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAE 65

Query: 23  LEEKAHS 3
            EEKAHS
Sbjct: 66  QEEKAHS 72


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 13/67 (19%)
 Frame = -3

Query: 164 SLKVEKFTGRNSFSLWQIKVRALLKREGLCTPL----VKSVPDLEP---------ENMAS 24
           ++++EKF G+NSF+LW+IK+RALLK + +  PL    VK     EP         E +A 
Sbjct: 6   TIRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAE 65

Query: 23  LEEKAHS 3
            EEKAHS
Sbjct: 66  QEEKAHS 72


>KYP50610.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 210

 Score = 50.8 bits (120), Expect = 9e-06
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 13/67 (19%)
 Frame = -3

Query: 164 SLKVEKFTGRNSFSLWQIKVRALLKREGLCTPLVKS-------------VPDLEPENMAS 24
           ++K+EKF G+NSF+LW+IK+RALLK + +  PL  +                ++ E+ A 
Sbjct: 4   TIKIEKFNGKNSFNLWRIKMRALLKEQRVWGPLATTSVKKERKTELSDKSTSIKKEDHAE 63

Query: 23  LEEKAHS 3
            EEKAHS
Sbjct: 64  QEEKAHS 70