BLASTX nr result
ID: Lithospermum23_contig00034170
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00034170
(449 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU83095.1 Retrovirus-related Pol polyprotein from transposon TN... 197 9e-63
BAA22288.1 polyprotein [Oryza australiensis] 208 1e-59
AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass... 199 6e-58
AAM74249.1 Putative retroelement [Oryza sativa Japonica Group] 199 1e-57
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 201 2e-57
CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group] 201 2e-57
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas... 197 4e-56
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass... 196 2e-55
AAD17357.1 contains similarity to retrovirus-related polyprotein... 193 6e-55
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic... 194 1e-54
KRY06569.1 Retrovirus-related Pol polyprotein from transposon TN... 188 5e-54
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 192 7e-54
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass... 192 7e-54
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 192 7e-54
ADB85411.1 putative retrotransposon protein [Phyllostachys edulis] 184 1e-52
XP_010670106.1 PREDICTED: dihydrolipoyllysine-residue acetyltran... 187 2e-52
KYP68472.1 Retrovirus-related Pol polyprotein from transposon TN... 183 1e-51
EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM ... 184 3e-51
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 184 4e-51
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group] 184 5e-51
>JAU83095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 138
Score = 197 bits (502), Expect = 9e-63
Identities = 98/137 (71%), Positives = 111/137 (81%)
Frame = -3
Query: 423 LMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGIVSQFTLAG 244
LM+HK ESFEKF+EFQNEVQNQL KTIK LRSDRGGEYLS FN HLRECGIVSQ T G
Sbjct: 2 LMKHKSESFEKFKEFQNEVQNQLGKTIKALRSDRGGEYLSQAFNDHLRECGIVSQLTPPG 61
Query: 243 TPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSAKKTSHEXX 64
TPQ NGVSERRNRTLLDMVRSMMS +DLP++F GYA+ ++AFTLNRCP+KS +KT +E
Sbjct: 62 TPQWNGVSERRNRTLLDMVRSMMSHTDLPLSFWGYAIETSAFTLNRCPSKSVQKTPYEIW 121
Query: 63 XXXXXXXXXLRIWGCEA 13
++IWGCEA
Sbjct: 122 TGKVPNLSFMKIWGCEA 138
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 208 bits (530), Expect = 1e-59
Identities = 104/149 (69%), Positives = 118/149 (79%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG++ LMRHK ESFEKF+EFQNEVQN L KTIK LRSDRGGEY+S EF HL++CGI
Sbjct: 525 FSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGI 584
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ NGVSERRNRTLLDMVRSMMS SDLP++F GYAL +AA TLNR P+KS
Sbjct: 585 VPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAALTLNRVPSKSV 644
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
+KT +E L+IWGCEAYVKR
Sbjct: 645 EKTPYEIWTGQPPSLSFLKIWGCEAYVKR 673
>AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 199 bits (507), Expect = 6e-58
Identities = 101/149 (67%), Positives = 115/149 (77%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK ESFEKF+EF NEVQN L+KTIK LRSDRGGEY S EF HL+ECGI
Sbjct: 74 FSRYGYVYLMRHKSESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGI 133
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ NGVS+RRNRTLLDMVRSMMS +DLP++F GYAL +A FT+NR P+KS
Sbjct: 134 VPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALETAVFTVNRVPSKSM 193
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT +E L+IWGCE YVKR
Sbjct: 194 DKTPYEIWTGKRPSLSFLKIWGCEVYVKR 222
>AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 199 bits (507), Expect = 1e-57
Identities = 101/149 (67%), Positives = 115/149 (77%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK ESFEKF+EF NEVQN L+KTIK LRSDRGGEY S EF HL+ECGI
Sbjct: 74 FSRYGYVYLMRHKSESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGI 133
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ NGVS+RRNRTLLDMVRSMMS +DLP++F GYAL +A FT+NR P+KS
Sbjct: 134 VPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGYALETAVFTVNRVPSKSM 193
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT +E L+IWGCE YVKR
Sbjct: 194 DKTPYEIWTGKRPSLSFLKIWGCEVYVKR 222
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 201 bits (512), Expect = 2e-57
Identities = 101/149 (67%), Positives = 116/149 (77%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LM+HK +SFE F+EFQNEVQNQ K+IK LRSDRGGEYLS F+ HLRECGI
Sbjct: 169 FSRYGYVYLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGI 228
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
VSQ T GTPQ NGVSERRNRTLLDMVRSMMS +DLP F GYAL ++AF LNRCP+KS
Sbjct: 229 VSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV 288
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
+KT +E L+IWGCE+Y KR
Sbjct: 289 EKTPYEIWTGKVPNLSFLKIWGCESYAKR 317
>CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 201 bits (510), Expect = 2e-57
Identities = 104/149 (69%), Positives = 115/149 (77%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRY +V LMRHK ESFEKF+EFQNEVQN L KTIK LRSDRGGEYLS EF HL+ECGI
Sbjct: 319 FSRYVYVYLMRHKSESFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGI 378
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ N VSERRNRTLLDMV+SMMS +DLP+ F GYAL +AAFTLNR P+KS
Sbjct: 379 VPQLTPPGTPQWNRVSERRNRTLLDMVQSMMSQTDLPLCFWGYALETAAFTLNRVPSKSV 438
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KTS+E L+IWGCE YVKR
Sbjct: 439 DKTSYEIWTGKRPSLSFLKIWGCEVYVKR 467
>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA93176.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 938
Score = 197 bits (502), Expect = 4e-56
Identities = 100/144 (69%), Positives = 112/144 (77%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK +SFEKF+EFQNEVQN L KTIK LRSDRGGEYLS EF HL+ECGI
Sbjct: 410 FSRYGYVYLMRHKSDSFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGI 469
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ NGVSERRNRTLLDMVRSMMS +DLP++F GY L +AAFTLNR P+KS
Sbjct: 470 VPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQTDLPLSFWGYTLETAAFTLNRVPSKSV 529
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCE 16
KT +E L+IWGCE
Sbjct: 530 DKTPYEIWTGKRPSLSFLKIWGCE 553
>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 196 bits (498), Expect = 2e-55
Identities = 101/149 (67%), Positives = 114/149 (76%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK ESFEKF+EFQNEVQN L KTIK LRSD GGEYLS EF HL+ CGI
Sbjct: 1001 FSRYGYVYLMRHKSESFEKFKEFQNEVQNHLRKTIKYLRSDHGGEYLSLEFGNHLKGCGI 1060
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ NGVSERRNRTLL+MVRSMMS ++L ++F GYAL +AAFTLNR P+KS
Sbjct: 1061 VPQLTPPGTPQWNGVSERRNRTLLNMVRSMMSQTNLLLSFWGYALETAAFTLNRVPSKSV 1120
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT +E L+IWGCE YVKR
Sbjct: 1121 DKTPYEIWTGKRPSLSFLKIWGCEVYVKR 1149
>AAD17357.1 contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] CAB77943.1 putative transposon protein
[Arabidopsis thaliana]
Length = 769
Score = 193 bits (490), Expect = 6e-55
Identities = 99/149 (66%), Positives = 116/149 (77%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
++RYG+V LM+HK ESFEK +EFQNEV+N+L K+IK LRSDRGGEYLS F+ HLRECGI
Sbjct: 201 FNRYGYVYLMKHKLESFEKSKEFQNEVKNKLGKSIKALRSDRGGEYLSQVFSDHLRECGI 260
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
VSQ T GTPQ NGVSERRN+TLLDMVRSMMS +DLP +F GYAL + F LNRCP+KS
Sbjct: 261 VSQLTPPGTPQGNGVSERRNQTLLDMVRSMMSHTDLPSSFWGYALETYVFMLNRCPSKSV 320
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
+KT +E L+I GCEAYVKR
Sbjct: 321 EKTPYEIWTGKVPNLSFLKILGCEAYVKR 349
>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
AAX92956.1 retrotransposon protein, putative, Ty1-copia
sub-class [Oryza sativa Japonica Group] ABA92827.2
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1184
Score = 194 bits (492), Expect = 1e-54
Identities = 100/149 (67%), Positives = 112/149 (75%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK ESFEKF+EF NEVQN L KTIK LRSDRGGEYLS EF HL+ECGI
Sbjct: 501 FSRYGYVYLMRHKSESFEKFKEFHNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGI 560
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ NGVSE RNRTLLDMVRSMMS ++L ++F GYAL + AFTLN P+KS
Sbjct: 561 VPQLTPPGTPQWNGVSEWRNRTLLDMVRSMMSQTNLLLSFWGYALETTAFTLNSVPSKSV 620
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT +E L+IWGCE YVKR
Sbjct: 621 DKTPYEIWTGKRPSLSFLKIWGCEVYVKR 649
>KRY06569.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trichinella patagoniensis]
Length = 618
Score = 188 bits (478), Expect = 5e-54
Identities = 91/140 (65%), Positives = 112/140 (80%)
Frame = -3
Query: 420 MRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGIVSQFTLAGT 241
M+HK E+FEKF+EFQ+EV+NQ ++ IK LRSDRGGE+LSHEF HLR+CGIVSQ T GT
Sbjct: 1 MKHKSETFEKFKEFQSEVENQRDRKIKFLRSDRGGEHLSHEFGAHLRKCGIVSQLTPPGT 60
Query: 240 PQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSAKKTSHEXXX 61
PQ NGVSE RNRTLLDMVRSMMSL+DLP++F GYAL +AAFTLNR P+KS + T +E
Sbjct: 61 PQRNGVSEHRNRTLLDMVRSMMSLTDLPLSFWGYALETAAFTLNRAPSKSVETTPYELWF 120
Query: 60 XXXXXXXXLRIWGCEAYVKR 1
L++WGC+AYV++
Sbjct: 121 GKKPKLSFLKVWGCDAYVEK 140
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 192 bits (487), Expect = 7e-54
Identities = 98/144 (68%), Positives = 110/144 (76%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK ESFEKFQEFQNEVQN L KTIK LRSDRGGEYLS E+ HL+ECGI
Sbjct: 490 FSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGI 549
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ N VSERRNR LLDMVRSMMS +D+P++F GYAL +AAFTLNR P+KS
Sbjct: 550 VPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSV 609
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCE 16
KT +E L+IW CE
Sbjct: 610 DKTPYEIWTGKRPSLSFLKIWCCE 633
>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 192 bits (487), Expect = 7e-54
Identities = 99/149 (66%), Positives = 112/149 (75%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+S+YG+V LMRHK ESFEKF+EFQNEVQN L KTIK LRSDRGGEYLS EF H +ECGI
Sbjct: 577 FSKYGYVYLMRHKSESFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHRKECGI 636
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ N VSERRNRTLLDMVRSMMS ++LP++F GYAL + AFTLN P+KS
Sbjct: 637 VPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQTNLPLSFSGYALETTAFTLNWVPSKSV 696
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT +E L+IWG E YVKR
Sbjct: 697 DKTPYEIWTGNRPSLSFLKIWGYEVYVKR 725
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 192 bits (487), Expect = 7e-54
Identities = 98/144 (68%), Positives = 110/144 (76%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG+V LMRHK ESFEKFQEFQNEVQN L KTIK LRSDRGGEYLS E+ HL+ECGI
Sbjct: 403 FSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGI 462
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ N VSERRNR LLDMVRSMMS +D+P++F GYAL +AAFTLNR P+KS
Sbjct: 463 VPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSV 522
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCE 16
KT +E L+IW CE
Sbjct: 523 DKTPYEIWTGKRPSLSFLKIWCCE 546
>ADB85411.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 566
Score = 184 bits (466), Expect = 1e-52
Identities = 93/124 (75%), Positives = 101/124 (81%)
Frame = -3
Query: 441 RYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGIVS 262
RY +V LM HK ESFEKF+EFQNEVQNQL KTIK LRSDRGGEYL HEF HL +CGIV
Sbjct: 171 RYSYVYLMIHKLESFEKFKEFQNEVQNQLGKTIKCLRSDRGGEYLRHEFGDHLNKCGIVP 230
Query: 261 QFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSAKK 82
Q T GTPQ NGVSERRNRTLLDMVRSMMS SDLP+ F GYAL + AFTLNR P+K+ KK
Sbjct: 231 QLTPPGTPQWNGVSERRNRTLLDMVRSMMSQSDLPLQFWGYALETVAFTLNRVPSKTVKK 290
Query: 81 TSHE 70
T +E
Sbjct: 291 TPYE 294
>XP_010670106.1 PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
1 of pyruvate dehydrogenase complex, mitochondrial [Beta
vulgaris subsp. vulgaris]
Length = 901
Score = 187 bits (475), Expect = 2e-52
Identities = 94/148 (63%), Positives = 115/148 (77%)
Frame = -3
Query: 444 SRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGIV 265
+R GF LMRHK +SFE+F+EFQNEVQNQL K IK L+SDRGGEYLS EF+ HL++CGI+
Sbjct: 20 NRLGFAYLMRHKSKSFERFKEFQNEVQNQLEKKIKTLQSDRGGEYLSQEFSDHLKDCGIL 79
Query: 264 SQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSAK 85
S++ GTPQ N VS+RRN+TLLD+VRSMMSL DLP++F G AL +AAFTLNR P+K+ +
Sbjct: 80 SEWNPLGTPQLNDVSKRRNQTLLDIVRSMMSLVDLPISFRGLALETAAFTLNRAPSKAVE 139
Query: 84 KTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT +E L IWGCEAYVKR
Sbjct: 140 KTLYETWTGNVPKSSFLMIWGCEAYVKR 167
>KYP68472.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 676
Score = 183 bits (464), Expect = 1e-51
Identities = 89/148 (60%), Positives = 111/148 (75%)
Frame = -3
Query: 444 SRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGIV 265
SRYGFV LM+HK SFE F+ F++EV+ Q K +K+LRSDRGGEYLS++F HL+E GI+
Sbjct: 27 SRYGFVYLMKHKSGSFEMFKIFRSEVEKQTGKNVKVLRSDRGGEYLSNDFLDHLKENGIL 86
Query: 264 SQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSAK 85
SQ+T GTPQHNGVSERRNRTLLDMVRSMM +DLP+N GYAL S+A+ LN+ PTKS
Sbjct: 87 SQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPINLWGYALESSAYLLNKVPTKSLS 146
Query: 84 KTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
T +E +++WGC AYVK+
Sbjct: 147 TTPYEIWKGRKPNLKHIKVWGCHAYVKK 174
>EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 184 bits (468), Expect = 3e-51
Identities = 90/149 (60%), Positives = 114/149 (76%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+SRYG++ L++HK ++FEKF+EF+NEV+NQL + IK+LRSDRGGEYLS EF +L+ECGI
Sbjct: 500 FSRYGYIYLIKHKSDTFEKFKEFKNEVENQLGRKIKMLRSDRGGEYLSIEFLDYLKECGI 559
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
VSQ T TPQ NGV+ERRNRTLLDMVRSMMS + LP++F GYAL +AA LN PTK
Sbjct: 560 VSQLTPPRTPQLNGVAERRNRTLLDMVRSMMSRASLPIHFWGYALETAAHILNLVPTKKV 619
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCEAYVKR 1
KT HE +++WGCEA+V+R
Sbjct: 620 AKTPHEMWTGKVPSLAHIKVWGCEAFVRR 648
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 184 bits (467), Expect = 4e-51
Identities = 93/126 (73%), Positives = 103/126 (81%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
YSRYG++ LMRHK ESFEKF+EFQNEVQNQL KTIK LRSDRGGE+LS EF HL++CGI
Sbjct: 613 YSRYGYIYLMRHKSESFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGI 672
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T TPQ NGVSER NRTLLDMVR MMS SDLP+ F GYAL +AAFTLNR P+KS
Sbjct: 673 VPQLTPPSTPQWNGVSERCNRTLLDMVRLMMSQSDLPLYFWGYALETAAFTLNRVPSKSV 732
Query: 87 KKTSHE 70
KT +E
Sbjct: 733 DKTPYE 738
>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 184 bits (466), Expect = 5e-51
Identities = 95/144 (65%), Positives = 108/144 (75%)
Frame = -3
Query: 447 YSRYGFVDLMRHKHESFEKFQEFQNEVQNQLNKTIKILRSDRGGEYLSHEFNTHLRECGI 268
+S+YG+V LMRHK ESFEKF+EFQNEVQN L KTIK LRSDRGGEYLS EF H +ECGI
Sbjct: 504 FSKYGYVYLMRHKSESFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHRKECGI 563
Query: 267 VSQFTLAGTPQHNGVSERRNRTLLDMVRSMMSLSDLPVNF*GYALLSAAFTLNRCPTKSA 88
V Q T GTPQ N VSERRNRTLLDMVRSMMS ++LP++F GYAL + AFTLN P+KS
Sbjct: 564 VPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQTNLPLSFSGYALETTAFTLNWVPSKSV 623
Query: 87 KKTSHEXXXXXXXXXXXLRIWGCE 16
KT +E L+IWG E
Sbjct: 624 DKTPYEIWTGNRPSLSFLKIWGYE 647