BLASTX nr result
ID: Lithospermum23_contig00032715
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00032715
(215 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX94812.1 retrotransposon protein, putative, Ty1-copia sub-clas... 128 2e-36
JAV01726.1 Retrovirus-related Pol polyprotein from transposon TN... 126 1e-34
CAE02400.1 OSJNBa0024J22.4 [Oryza sativa Japonica Group] CAD4052... 131 5e-34
OAO97959.1 hypothetical protein AXX17_AT4G08610 [Arabidopsis tha... 130 8e-34
ABA97342.2 retrotransposon protein, putative, Ty1-copia subclass... 130 1e-33
ABA97706.1 retrotransposon protein, putative, Ty1-copia subclass... 122 2e-33
BAA22288.1 polyprotein [Oryza australiensis] 129 4e-33
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 129 4e-33
ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass... 128 8e-33
AAP03364.1 putative polyprotein [Oryza sativa Japonica Group] 127 8e-33
ABF96491.1 retrotransposon protein, putative, Ty1-copia subclass... 127 1e-32
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 127 1e-32
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 127 1e-32
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 127 1e-32
AAX96622.1 retrotransposon protein, putative, Ty1-copia sub-clas... 122 1e-32
OAE32320.1 hypothetical protein AXG93_809s1010 [Marchantia polym... 120 2e-32
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group] 127 2e-32
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass... 127 2e-32
CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group] 126 4e-32
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 125 7e-32
>AAX94812.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA93175.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 155
Score = 128 bits (322), Expect = 2e-36
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQ G+VFCLNGGA
Sbjct: 80 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQFGFVFCLNGGA 139
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 140 VSWKSSKQDTV 150
>JAV01726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 243
Score = 126 bits (316), Expect = 1e-34
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHW AVK ILKYLR TKD FLVYGG +EL ++GYTDASFQTD+DD+RSQSG++FCLNGGA
Sbjct: 55 SHWTAVKNILKYLRNTKDKFLVYGGSDELVLSGYTDASFQTDKDDFRSQSGFIFCLNGGA 114
Query: 182 VSWRSSKQSTV 214
VSW+SSKQSTV
Sbjct: 115 VSWKSSKQSTV 125
>CAE02400.1 OSJNBa0024J22.4 [Oryza sativa Japonica Group] CAD40526.2
OSJNBa0023J03.14 [Oryza sativa Japonica Group]
CAH66059.1 OSIGBa0125J07.8 [Oryza sativa Indica Group]
CAH66155.1 OSIGBa0113B06.1 [Oryza sativa Indica Group]
Length = 704
Score = 131 bits (329), Expect = 5e-34
Identities = 61/71 (85%), Positives = 66/71 (92%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 516 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGA 575
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ+TV
Sbjct: 576 VSWKSSKQNTV 586
>OAO97959.1 hypothetical protein AXX17_AT4G08610 [Arabidopsis thaliana]
Length = 568
Score = 130 bits (326), Expect = 8e-34
Identities = 60/71 (84%), Positives = 66/71 (92%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWI VK ILKYLRRTKD FLVYGG EEL V+GYTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 383 SHWIVVKNILKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFVFCLNGGA 442
Query: 182 VSWRSSKQSTV 214
+SW+SSKQSTV
Sbjct: 443 LSWKSSKQSTV 453
>ABA97342.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 130 bits (327), Expect = 1e-33
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 863 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVKGYTDASFQTDKDDFRSQSGFVFCLNGGA 922
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 923 VSWKSSKQDTV 933
>ABA97706.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 206
Score = 122 bits (305), Expect = 2e-33
Identities = 55/68 (80%), Positives = 61/68 (89%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIA+K ILKYLRRTKD FLVYGG EEL V GYTD SFQ D+DD+RSQSG++FCLNGGA
Sbjct: 44 SHWIAIKNILKYLRRTKDMFLVYGGHEELVVNGYTDTSFQNDKDDFRSQSGFLFCLNGGA 103
Query: 182 VSWRSSKQ 205
VSW+SSKQ
Sbjct: 104 VSWKSSKQ 111
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 129 bits (323), Expect = 4e-33
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +2
Query: 5 HWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGAV 184
HW AVK ILKYLRRTKD FLVYGG+E+L V+GYTDASFQTD+DDYRSQSG+VFCLNGGAV
Sbjct: 1130 HWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAV 1189
Query: 185 SWRSSKQSTV 214
SW+SSKQ TV
Sbjct: 1190 SWKSSKQDTV 1199
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 129 bits (323), Expect = 4e-33
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +2
Query: 5 HWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGAV 184
HW AVK ILKYLRRTKDAFL+YGGDEEL V GYTDASFQTD+DDYRSQSG+VF LNGGAV
Sbjct: 1126 HWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAV 1185
Query: 185 SWRSSKQSTV 214
SW+SSKQ TV
Sbjct: 1186 SWKSSKQETV 1195
>ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 128 bits (321), Expect = 8e-33
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FL+YGG EEL V YTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 753 SHWIAVKNILKYLRRTKDMFLIYGGQEELVVNNYTDASFQTDKDDFRSQSGFVFCLNGGA 812
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 813 VSWKSSKQDTV 823
>AAP03364.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 127 bits (320), Expect = 8e-33
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQS +VFCLNGGA
Sbjct: 493 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQSKFVFCLNGGA 552
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 553 VSWKSSKQDTV 563
>ABF96491.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 127 bits (320), Expect = 1e-32
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQS +VFCLNGGA
Sbjct: 603 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQSKFVFCLNGGA 662
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 663 VSWKSSKQDTV 673
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 127 bits (320), Expect = 1e-32
Identities = 60/70 (85%), Positives = 63/70 (90%)
Frame = +2
Query: 5 HWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGAV 184
HW AVK ILKYLRRTKD FLVYGGDEEL V GYTDASFQTD+DDYRSQSG+VF LNGGAV
Sbjct: 710 HWTAVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAV 769
Query: 185 SWRSSKQSTV 214
SW+SSKQ TV
Sbjct: 770 SWKSSKQETV 779
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 127 bits (320), Expect = 1e-32
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYG EEL V GYTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 991 SHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGA 1050
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 1051 VSWKSSKQDTV 1061
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 127 bits (320), Expect = 1e-32
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYG EEL V GYTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 1078 SHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGA 1137
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 1138 VSWKSSKQDTV 1148
>AAX96622.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA92972.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 305
Score = 122 bits (307), Expect = 1e-32
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
+HWIAVK ILKYL RTKD FLVYGG EEL V YTDASFQTD+DD+RSQSG+VFCLNGGA
Sbjct: 112 THWIAVKNILKYLIRTKDMFLVYGGQEELVVNDYTDASFQTDKDDFRSQSGFVFCLNGGA 171
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ T+
Sbjct: 172 VSWKSSKQDTL 182
>OAE32320.1 hypothetical protein AXG93_809s1010 [Marchantia polymorpha subsp.
polymorpha]
Length = 217
Score = 120 bits (300), Expect = 2e-32
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +2
Query: 5 HWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGAV 184
HWIAVK ILKY RRTK+ FLVYGG EEL V GYTDASFQ D+DD +SQSGYVFCLNGGAV
Sbjct: 39 HWIAVKNILKYFRRTKEMFLVYGGLEELVVKGYTDASFQIDQDDSKSQSGYVFCLNGGAV 98
Query: 185 SWRSSKQSTV 214
SW+SSKQ TV
Sbjct: 99 SWKSSKQETV 108
>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 127 bits (318), Expect = 2e-32
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQSG+VFCLNG A
Sbjct: 994 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGSA 1053
Query: 182 VSWRSSKQST 211
VSW+SSKQ T
Sbjct: 1054 VSWKSSKQDT 1063
>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 127 bits (318), Expect = 2e-32
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRTKD FLVYGG EEL V GYTDASFQTD+DD+RSQSG+VFCLNG A
Sbjct: 1052 SHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGSA 1111
Query: 182 VSWRSSKQST 211
VSW+SSKQ T
Sbjct: 1112 VSWKSSKQDT 1121
>CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 126 bits (316), Expect = 4e-32
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWIAVK ILKYLRRT+D FLVYGG EEL V GYTDASFQTD+DD+RS+SG+VFCLNGG
Sbjct: 851 SHWIAVKNILKYLRRTEDMFLVYGGQEELVVNGYTDASFQTDKDDFRSRSGFVFCLNGGV 910
Query: 182 VSWRSSKQSTV 214
VSW+SSKQ TV
Sbjct: 911 VSWKSSKQDTV 921
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 125 bits (314), Expect = 7e-32
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +2
Query: 2 SHWIAVKCILKYLRRTKDAFLVYGGDEELAVTGYTDASFQTDRDDYRSQSGYVFCLNGGA 181
SHWI V+ I KYLRRTKD FLVYGG EEL V+GYTDASFQTD+DD+RSQSG+ FCLNGGA
Sbjct: 776 SHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGA 835
Query: 182 VSWRSSKQSTV 214
VSW+S+KQSTV
Sbjct: 836 VSWKSTKQSTV 846