BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00032396
         (341 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001235160.1 gag-protease polyprotein [Glycine max] pir||T0641...    60   2e-08
AAO73521.1 gag-pol polyprotein [Glycine max]                           60   3e-08
AAC64917.1 gag-pol polyprotein [Glycine max]                           60   5e-08
AAO73525.1 gag-pol polyprotein [Glycine max]                           59   6e-08
AAO73529.1 gag-pol polyprotein [Glycine max]                           59   6e-08
AAO73527.1 gag-pol polyprotein [Glycine max]                           59   9e-08
GAU16893.1 hypothetical protein TSUD_368430 [Trifolium subterran...    58   2e-07
GAU49215.1 hypothetical protein TSUD_369840 [Trifolium subterran...    58   2e-07
AAO73523.1 gag-pol polyprotein [Glycine max]                           58   2e-07
GAU35638.1 hypothetical protein TSUD_394780 [Trifolium subterran...    56   1e-06
GAU44433.1 hypothetical protein TSUD_100800 [Trifolium subterran...    55   1e-06
GAU41074.1 hypothetical protein TSUD_284440 [Trifolium subterran...    54   5e-06

>NP_001235160.1 gag-protease polyprotein [Glycine max] pir||T06419 gag-proteinase
           polyprotein - soybean retrovirus-like element AAC18777.1
           gag-protease polyprotein [Glycine max]
          Length = 640

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D+L+E+  +G + G+  G+ F+     +    T+FV       +T+ +    
Sbjct: 431 IKMLNKGSDMLDEVLQLGKNVGNQRGLGFNHKSAGRITM-TEFVPAKISTGATMSQHRSR 489

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYG--PRGSKYQPSRTQ--WVKKVNIVTH 333
           H   Q+K+SK   W CHY GK  HI P+CY L+G    G++   SR +  WV K  IV+ 
Sbjct: 490 HHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSSSRRKMMWVPKHKIVSL 549

Query: 334 V 336
           V
Sbjct: 550 V 550


>AAO73521.1 gag-pol polyprotein [Glycine max]
          Length = 1574

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D L+E+  +G + G+  G+ F+     +    T+FV       +T+ +    
Sbjct: 430 IKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTM-TEFVPAKNRTGATMSQHRSR 488

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYGPRGSKYQPSRTQ--WV---KKVNIVT 330
           H   Q+K+SK   W CHY GK  HI P+CY L+   G++   SR +  WV   K V++V 
Sbjct: 489 HHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQSSNSRKKMMWVPKHKAVSLVV 548

Query: 331 HVA 339
           H +
Sbjct: 549 HTS 551


>AAC64917.1 gag-pol polyprotein [Glycine max]
          Length = 1550

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D+L+E+  +G + G+  G+ F+     +    T+FV       +T+ +    
Sbjct: 404 IKMLNKGSDLLDEVLQLGKNVGNQRGLGFNHKSAGRTTM-TEFVPAKNSTGATMSQHRSR 462

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYGPRGSKYQPS----RTQWV---KKVNI 324
           H   Q+K+SK   W CHY GK  HI P+CY L+G      Q S    +  WV   K V++
Sbjct: 463 HHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSSSGRKMMWVPKHKTVSL 522

Query: 325 VTHVA 339
           V H +
Sbjct: 523 VVHTS 527


>AAO73525.1 gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 59.3 bits (142), Expect = 6e-08
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D+L+E+  +G + G+  G+ F+     +    T+FV       +T+ +    
Sbjct: 430 IKMLNKGSDMLDEVLQLGKNVGNQRGLGFNHKSACRITM-TEFVPAKNSTGATMSQHRSR 488

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYGPRGSKYQPS----RTQWVKKVNIVTH 333
           H   Q+K+SK   W CHY GK  HI P+CY L+G      Q S    +  WV K  IV+ 
Sbjct: 489 HHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSSSGRKMMWVPKHKIVSL 548

Query: 334 V 336
           V
Sbjct: 549 V 549


>AAO73529.1 gag-pol polyprotein [Glycine max]
          Length = 1577

 Score = 59.3 bits (142), Expect = 6e-08
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D+L+++  +G   G+  G+ F+     +    T+FV       +T+ +    
Sbjct: 431 IKMLNKGSDMLDZVLQLGKKVGNQRGLGFNHKSAGRTTM-TEFVPAKNSTGATMSQHRSR 489

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYGPRGSKYQPS----RTQWVKKVNIVTH 333
           H   Q+KRSK   W CHY GK  HI P+CY L+G      Q S    +  WV K  IV+ 
Sbjct: 490 HHGTQQKRSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQGSSSGRKMMWVPKHKIVSL 549

Query: 334 V 336
           V
Sbjct: 550 V 550


>AAO73527.1 gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 58.9 bits (141), Expect = 9e-08
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D L+E+  +G + G+  G+ F+  K       T+FV       +T+ +    
Sbjct: 430 IKMLNKGSDTLDEVLLLGKNAGNQRGLGFNP-KFAGRTTMTEFVPAKNRTGTTMSQHLSR 488

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYG--PRGSKYQPSRTQ--WV---KKVNI 324
           H   Q+K+SK   W CHY GK  HI P+CY L+G    G++   SR +  WV   K V++
Sbjct: 489 HHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRKKMMWVPKHKAVSL 548

Query: 325 VTHVA 339
           V H +
Sbjct: 549 VVHTS 553


>GAU16893.1 hypothetical protein TSUD_368430 [Trifolium subterraneum]
          Length = 1353

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
 Frame = +1

Query: 10  INSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKE---DTKFVQEGWVYPSTIEKAAVG 180
           +N+ST +LE++     +   + GI ++   L KPKE   + KF+  G      + K  + 
Sbjct: 606 MNNSTVVLEKLIKSQEEGNWVKGIGYEYEDLNKPKEYDPELKFLPSGRNKKFPMPKQRLP 665

Query: 181 H-------QRKRSKVWYCHYYGKKCHITPYCYKLYG-PRGSKYQPSRTQ 303
           H       +  R + W CHY G++ HI P+CY+LYG P+ S+ + S  +
Sbjct: 666 HFQPHLGFRNMRPQPWICHYCGRRGHIRPFCYRLYGFPKRSQREVSEKE 714


>GAU49215.1 hypothetical protein TSUD_369840 [Trifolium subterraneum]
          Length = 1382

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
 Frame = +1

Query: 10   INSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKE---DTKFVQEGWVYPSTIEKAAVG 180
            +N+ST +LE++     +   + GI ++   L KPKE   + KF+  G      + K  + 
Sbjct: 745  MNNSTVVLEKLIKSQEEGNWVKGIGYEYEDLNKPKEYDPELKFLPSGRNKKFPMPKQRLP 804

Query: 181  H-------QRKRSKVWYCHYYGKKCHITPYCYKLYG--PRGSKYQPSR------TQWVKK 315
            H       +  R + W CHY G++ HI P+CY+LYG   R  +  P +       +W  K
Sbjct: 805  HFQPHPGFRNTRPQPWICHYCGRRGHIRPFCYRLYGFPKRSQREVPEKEEIHQAKEWKPK 864

Query: 316  VNIVTHVA 339
             N+   +A
Sbjct: 865  GNVAGLIA 872


>AAO73523.1 gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
 Frame = +1

Query: 1   LKMINSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKEDTKFVQEGWVYPSTIEKAAVG 180
           +KM+N  +D L+E+  +G + G+  G+ F+     +    T+FV       +T+ +    
Sbjct: 430 IKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTM-TEFVPAKNRTGATMSQHRSR 488

Query: 181 H---QRKRSK--VWYCHYYGKKCHITPYCYKLYG--PRGSKYQPSRTQ--WV---KKVNI 324
           H   Q+K+SK   W CHY GK  HI P+CY L+G    G++   SR +  WV   K V++
Sbjct: 489 HHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRKKMMWVPKHKAVSL 548

Query: 325 VTHVA 339
           V H +
Sbjct: 549 VVHTS 553


>GAU35638.1 hypothetical protein TSUD_394780 [Trifolium subterraneum]
          Length = 1320

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
 Frame = +1

Query: 1   LKMINSST---DILEEIFGVGNDTGDITGISFDKGK------LFKPKEDTKFVQEGWVYP 153
           L+++N+ T   DIL E    G   G     ++ K K       F P +DT    E    P
Sbjct: 271 LRLLNNGTERLDILVEGQVAGKPKGIGVEYNYPKKKNVTSTSTFVPAKDTYDPTETRQMP 330

Query: 154 STIEKAAVGHQRKRSKVWYCHYYGKKCHITPYCYKLYG-PR-------GSKYQPSRTQWV 309
             +++        + K W CHY G+K HI P+C++LYG PR        S    ++ +W 
Sbjct: 331 QHVQQQQPAKIIPKPKGWICHYCGRKGHIRPFCFRLYGFPRWYSNPRYKSDSSNAKKEWK 390

Query: 310 KKVNIVTHVA 339
            K N V H+A
Sbjct: 391 PKANDVAHIA 400


>GAU44433.1 hypothetical protein TSUD_100800 [Trifolium subterraneum]
          Length = 914

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
 Frame = +1

Query: 7    MINSSTDILEEIFG---VGNDTGDITGISFD---KGKLFKPKEDTKFVQEGWVYPSTIEK 168
            M++ ST +L+EI     VG       G+ ++   K +++ P  DTKF+     + ST+ +
Sbjct: 805  MMHHSTHVLDEILEKQVVGGPRP--IGLDYETLNKKQMYDP--DTKFMTAEGNHYSTVPR 860

Query: 169  AAVGH-------QRKRSKVWYCHYYGKKCHITPYCYKLYG 267
                H       Q  RS+ W CH+ GKK HI P+CYKLYG
Sbjct: 861  QMFQHPKRHQKTQMNRSRSWICHHCGKKGHIRPFCYKLYG 900


>GAU41074.1 hypothetical protein TSUD_284440 [Trifolium subterraneum]
          Length = 1364

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
 Frame = +1

Query: 10  INSSTDILEEIFGVGNDTGDITGISFDKGKLFKPKE---DTKFVQEGWVYPSTIEKAAVG 180
           +N ST +LE++         I GI ++   L KPKE   + KF+  G      +    + 
Sbjct: 435 MNESTAVLEKLIESQVPGKSIKGIDYEYQDLNKPKEYDSELKFLPFGGNKRPPMPNRRLP 494

Query: 181 H-------QRKRSKVWYCHYYGKKCHITPYCYKLYG-PRGSKYQPSRTQWVK 312
           H       +  + + W CHY+G++ HI P+CY+LY  PR ++ + S  + +K
Sbjct: 495 HVQPHLGCRNMKPQPWICHYFGRRGHIRPFCYRLYRYPRRNQREISEKEGIK 546