BLASTX nr result

ID: Lithospermum23_contig00032223 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00032223
         (261 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...    77   1e-14
XP_013608321.1 PREDICTED: L-type lectin-domain containing recept...    72   1e-12
OAE22245.1 hypothetical protein AXG93_412s1350 [Marchantia polym...    56   4e-07
OAE30778.1 hypothetical protein AXG93_4876s1190 [Marchantia poly...    54   1e-06
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...    53   4e-06
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...    53   4e-06
KYP47563.1 Retrovirus-related Pol polyprotein from transposon TN...    52   1e-05

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 42/86 (48%), Positives = 49/86 (56%)
 Frame = +2

Query: 2   GSSLDTQAVGLFANSNQXXXXXXXXXXXXXXXXXXXLGDVCHYCKEKGHWKTDCPKKRQG 181
           G+S D Q  GLF +S +                     DVC+YCKEKGHWK DCPKK++ 
Sbjct: 187 GTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPD--DVCNYCKEKGHWKFDCPKKKKQ 244

Query: 182 QFNASGTAAVAESSTKSEEDIALVAD 259
               S +AAVAE  T SEEDIALVAD
Sbjct: 245 SEKQSVSAAVAEEDTNSEEDIALVAD 270


>XP_013608321.1 PREDICTED: L-type lectin-domain containing receptor kinase I.8-like
           [Brassica oleracea var. oleracea]
          Length = 731

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 38/83 (45%), Positives = 46/83 (55%)
 Frame = +2

Query: 5   SSLDTQAVGLFANSNQXXXXXXXXXXXXXXXXXXXLGDVCHYCKEKGHWKTDCPKKRQGQ 184
           S  D QA GLF +  +                     D C+YCKEKGHWK+DCPKK++ Q
Sbjct: 46  SGTDNQASGLFVSGVKGHGKKRKSKDRKSFPRGPKPTDTCNYCKEKGHWKSDCPKKKKEQ 105

Query: 185 FNASGTAAVAESSTKSEEDIALV 253
              SG+AAVAE   KS+ DIALV
Sbjct: 106 --QSGSAAVAEDEAKSDSDIALV 126


>OAE22245.1 hypothetical protein AXG93_412s1350 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 655

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +2

Query: 116 DVCHYCKEKGHWKTDCPKKRQGQFNASGTAAVAESSTKSEEDIALVAD 259
           DVC +CKEKGHWK DCPK+  GQ   + +AA+ E  + SE+D  L  D
Sbjct: 43  DVCAWCKEKGHWKRDCPKR--GQQGQNRSAAMVEKGSSSEDDYVLSMD 88


>OAE30778.1 hypothetical protein AXG93_4876s1190 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 232

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = +2

Query: 116 DVCHYCKEKGHWKTDCPKKRQGQFNASGTAAVAESSTKSEEDIAL 250
           DVC +CKEKGH K DCPK  QGQ   +G+AA+ E  + SE+D  L
Sbjct: 164 DVCAWCKEKGHGKRDCPK--QGQQGQNGSAAMVEKGSSSEDDYVL 206


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 116 DVCHYCKEKGHWKTDCPKKRQGQFNASGTAAVAESSTKSEEDIAL-VAD 259
           D+C+YCKE GHWK DCPKK+        +AAVA+  + SE ++ L +AD
Sbjct: 237 DICNYCKEPGHWKKDCPKKK-----GKPSAAVAKEESTSENELVLSIAD 280


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 116 DVCHYCKEKGHWKTDCPKKRQGQFNASGTAAVAESSTKSEEDIAL-VAD 259
           D+C+YCKE GHWK DCPKK+        +AAVA+  + SE ++ L +AD
Sbjct: 237 DICNYCKEPGHWKKDCPKKK-----GKPSAAVAKEESTSENELVLSIAD 280


>KYP47563.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 269

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 116 DVCHYCKEKGHWKTDCPKKRQGQFNASGTAAVAESSTKSEEDIAL 250
           D+C+YCKE GHWK DCPKKR    N    AA  +  +  E ++ L
Sbjct: 132 DICNYCKEPGHWKKDCPKKR----NQKSVAAATQEDSSFENELVL 172


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