BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00031670
         (1078 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADD30905.1 putative RF1 protein (chloroplast) [Ehretia acuminata]     527   e-170
CBR30467.1 Ycf1 protein (plastid) [Olea europaea subsp. europaea]     422   e-131
YP_009240853.1 ycf1 protein (chloroplast) [Diplopanax stachyanth...   419   e-130
YP_009041145.1 hypothetical chloroplast RF1 [Rhazya stricta] AHW...   413   e-128
YP_008081324.1 hypothetical chloroplast RF1 (chloroplast) (chlor...   410   e-127
YP_004935725.1 ycf1 protein (chloroplast) [Sesamum indicum] AEO9...   402   e-124
YP_009255665.1 ycf1 protein (chloroplast) [Cornus controversa] A...   387   e-119
ADD30914.1 putative RF1 protein (chloroplast) [Cornus florida]        387   e-118
XP_011081446.1 PREDICTED: LOW QUALITY PROTEIN: protein TIC 214 [...   381   e-117
YP_004940568.1 ycf1 gene product (chloroplast) [Dorcoceras hygro...   379   e-116
YP_008964091.1 hypothetical chloroplast RF1 [Ajuga reptans] AHA8...   378   e-115
YP_008994344.1 hypothetical chloroplast RF19 [Melianthus villosu...   373   e-114
YP_009108647.1 Ycf1 [Echites umbellatus] AIW05322.1 Ycf1 (plasti...   368   e-112
ADH94401.1 hypothetical chloroplast RF1 (chloroplast) [Syzygium ...   362   e-110
YP_009166744.1 hypothetical chloroplast RF19 (chloroplast) [Tana...   353   e-109
YP_008578231.1 hypothetical chloroplast RF1 (chloroplast) [Stock...   358   e-108
YP_008575426.1 hypothetical chloroplast RF1 (chloroplast) [Eucal...   356   e-108
YP_009179128.1 Ycf1 (chloroplast) [Salix babylonica] ALK27060.1 ...   355   e-107
YP_008575596.1 hypothetical chloroplast RF1 (chloroplast) [Eucal...   354   e-107
YP_009121532.1 hypothetical protein RF1 (chloroplast) [Salix suc...   354   e-107

>ADD30905.1 putative RF1 protein (chloroplast) [Ehretia acuminata]
          Length = 1814

 Score =  527 bits (1357), Expect = e-170
 Identities = 273/364 (75%), Positives = 300/364 (82%), Gaps = 6/364 (1%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            KK+I L TL+K P  +LDN W+Y NK+KSNNL NEF NRIE LD +   LD IETRTRLC
Sbjct: 429  KKRIFLSTLEKTPSDELDNRWVYTNKEKSNNLTNEFLNRIEVLDREPLSLDIIETRTRLC 488

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTDSQ 717
            ND+TKKEYLP MYDPFLNGPYRGTIKK FS SIITSIENFKKRVGINRIHSILLPYTD Q
Sbjct: 489  NDNTKKEYLPKMYDPFLNGPYRGTIKKWFSPSIITSIENFKKRVGINRIHSILLPYTDYQ 548

Query: 716  ELINEIITDANDQKIRKKYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQIRSR 537
            EL+N I+TD N QKIRKK IGIKEISKK PR SYKLIT+LEQQSGEYQE+VPL HQIRSR
Sbjct: 549  ELVNSILTDPNGQKIRKKSIGIKEISKKAPRRSYKLITDLEQQSGEYQEDVPLDHQIRSR 608

Query: 536  KAKRVVIFTDNKQDTDPNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRRKITI 357
            KAKRVVIFT NKQ+ DPNT +T T D+TDE+ALIRYSQQSDFRRGIIKGSMRAQRRK  I
Sbjct: 609  KAKRVVIFTINKQNNDPNTKDTNTPDQTDEVALIRYSQQSDFRRGIIKGSMRAQRRKTVI 668

Query: 356  WELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFRNWLKGGAEVKVGEY------AXXX 195
            WELFQAN HSPLFLDRIKKS  FSFDI  L+ P+FRNW++ GAEV++GEY          
Sbjct: 669  WELFQANAHSPLFLDRIKKSPLFSFDISRLINPIFRNWVRKGAEVQIGEYIEEQTKREEG 728

Query: 194  XXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILL 15
                     E  ++++AEAWDT+PFAQ IRG MLITQSILRKY LLPSLIIAKNIGR+LL
Sbjct: 729  DKKEENKRKEKARIQVAEAWDTIPFAQGIRGSMLITQSILRKYILLPSLIIAKNIGRMLL 788

Query: 14   FQLP 3
            FQLP
Sbjct: 789  FQLP 792


>CBR30467.1 Ycf1 protein (plastid) [Olea europaea subsp. europaea]
          Length = 1801

 Score =  422 bits (1084), Expect = e-131
 Identities = 234/371 (63%), Positives = 269/371 (72%), Gaps = 13/371 (3%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            K++ISL TL K    +L N W+Y NK+KSNNLNNEF NRI+ALD +  FL+ +ETRTRLC
Sbjct: 435  KRRISLPTLQKFSSNELYNHWVYTNKEKSNNLNNEFVNRIQALDKESLFLNILETRTRLC 494

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSII----TSIENFKKRVGINRIHSILLPY 729
            ND+T KEYLP +YDPFLNGPYR TI K  S SII    TSI+NF ++VGINRIH I+LP 
Sbjct: 495  NDNTTKEYLPKIYDPFLNGPYRRTITKSVSPSIIKIKKTSIDNFIEKVGINRIHGIILPD 554

Query: 728  TDSQELINEIITDANDQKIRKKYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQ 549
            TD Q             KI KK I IKEISKK PRW YKL +ELEQ++GE QE  PL H+
Sbjct: 555  TDYQ-------------KISKKSIRIKEISKKVPRWLYKLTSELEQEAGEDQENGPLDHE 601

Query: 548  IRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRR 369
            IRSRKAKRVVIFT NK+ T+    +T   D+TDE+ALIRYSQQSDFRRGIIKGS+RAQRR
Sbjct: 602  IRSRKAKRVVIFTGNKEHTE----DTNPPDQTDEVALIRYSQQSDFRRGIIKGSIRAQRR 657

Query: 368  KITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFRNWLKGGAEVKVGEYA----- 204
            KI IWELFQANVHSPLFLDRIKKS  FSFDI   +K +FRNW+  G+  K+ EY      
Sbjct: 658  KIVIWELFQANVHSPLFLDRIKKSLLFSFDISGSIKKIFRNWVGRGSAFKIVEYTEEQTK 717

Query: 203  ----XXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAK 36
                            E  ++EIAEAWDT+PFAQ IRG MLITQS+ RKY LLPSLIIAK
Sbjct: 718  REEKKEKDKKEENKRKENARIEIAEAWDTIPFAQVIRGSMLITQSLFRKYILLPSLIIAK 777

Query: 35   NIGRILLFQLP 3
            NIGR+LL QLP
Sbjct: 778  NIGRMLLLQLP 788


>YP_009240853.1 ycf1 protein (chloroplast) [Diplopanax stachyanthus] AJO25203.1 ycf1
            protein (chloroplast) [Diplopanax stachyanthus]
          Length = 1819

 Score =  419 bits (1077), Expect = e-130
 Identities = 229/360 (63%), Positives = 264/360 (73%), Gaps = 2/360 (0%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            ++KI L T++K+   +L N W+Y N+QKS NL+ EF NRIE LD   F LD +E RTRLC
Sbjct: 433  QRKIPLSTIEKLSSDELYNHWVYTNEQKSKNLSKEFINRIETLDRGSFSLDILEKRTRLC 492

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSII--TSIENFKKRVGINRIHSILLPYTD 723
            ND+TKKEYLP MYDPFLNG  RGTIKK FS SII  TSI+NF + V IN+IH IL   TD
Sbjct: 493  NDETKKEYLPKMYDPFLNGSSRGTIKKLFSPSIINETSIQNFIETVWINKIHGILFTDTD 552

Query: 722  SQELINEIITDANDQKIRKKYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQIR 543
             +E          DQKIRKK IGIKEISKK PRWSYKLI +LEQQ  E QE+VP+ HQIR
Sbjct: 553  YREF---------DQKIRKKPIGIKEISKKVPRWSYKLINDLEQQ--EDQEDVPVEHQIR 601

Query: 542  SRKAKRVVIFTDNKQDTDPNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRRKI 363
            SRKA+RVVIFT+N+Q+ D NT +    D+TDE+ALIRYSQQSDFRR IIKGSMRAQRRK 
Sbjct: 602  SRKARRVVIFTNNQQNIDTNTKDINNLDQTDEVALIRYSQQSDFRRDIIKGSMRAQRRKT 661

Query: 362  TIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFRNWLKGGAEVKVGEYAXXXXXXX 183
             IWELFQAN HSP FLDRI KS  FSFDI  LMK +F NW+    E+K+ +Y        
Sbjct: 662  VIWELFQANAHSPFFLDRIDKSPFFSFDISRLMKFIFGNWMGKKTELKILDYTKKQIKEE 721

Query: 182  XXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
                 E  ++EIAEAWDT+PFAQ IRG ML+TQ ILRKY + PSLIIAKNIGRILL Q P
Sbjct: 722  EKKRKEKGRLEIAEAWDTIPFAQVIRGSMLVTQLILRKYIIFPSLIIAKNIGRILLLQFP 781


>YP_009041145.1 hypothetical chloroplast RF1 [Rhazya stricta] AHW52242.1 hypothetical
            chloroplast RF19 (chloroplast) [Rhazya stricta]
            AIB08792.1 hypothetical chloroplast RF1 (plastid) [Rhazya
            stricta]
          Length = 1775

 Score =  413 bits (1062), Expect = e-128
 Identities = 232/387 (59%), Positives = 267/387 (68%), Gaps = 29/387 (7%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            K+KIS  TL+K P  + DN WIY+   K NN+N EFRNRIEALD    F+D +ETRTRLC
Sbjct: 415  KRKISWCTLEKTPSNKFDNHWIYLKNIKENNINKEFRNRIEALDKGSLFIDILETRTRLC 474

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTDSQ 717
             DDTK +Y P  YDPFLNG  R T+KK     I TSIEN ++  GIN+I++IL P  D Q
Sbjct: 475  TDDTKNKYFPKTYDPFLNGTDRVTMKK----GIKTSIENLRETFGINQIYAILFPDPDYQ 530

Query: 716  E----------------LINEIITDANDQKIRKKYIGIKEISKKTPRWSYKLITELEQQS 585
            E                L N I T  N QKI K+ IGIKEISK+ PRWSYKLI++LEQ S
Sbjct: 531  EFEEKTDTFDKERFCKFLFNAIQTHTNGQKIPKESIGIKEISKRVPRWSYKLISDLEQLS 590

Query: 584  GEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETS--DRTDELALIRYSQQSDF 411
            GEYQE V + HQIRSRKAKRVVIFT NK++TD NT N +T+  D  +E+AL+RYSQ SDF
Sbjct: 591  GEYQENVTVDHQIRSRKAKRVVIFTGNKENTDSNTNNKDTNPTDPRNEIALLRYSQHSDF 650

Query: 410  RRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFRNWLK-- 237
            RRGIIKGSMRAQRRKI IWELFQANVHSPLFLDRIK SS  SFDI E++K +  NW    
Sbjct: 651  RRGIIKGSMRAQRRKIVIWELFQANVHSPLFLDRIKGSSRLSFDISEIIKVILLNWTDTG 710

Query: 236  GGAEVKVGEY---------AXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQ 84
             G E ++ EY                      E  ++EI+EAWDT+PFAQ IRG MLITQ
Sbjct: 711  KGVESEIAEYIDEKTKKEDKKEKDKKEENIRKEQTRIEISEAWDTIPFAQVIRGSMLITQ 770

Query: 83   SILRKYFLLPSLIIAKNIGRILLFQLP 3
            SILRKY LLPSLIIAKNIGRILL QLP
Sbjct: 771  SILRKYILLPSLIIAKNIGRILLLQLP 797


>YP_008081324.1 hypothetical chloroplast RF1 (chloroplast) (chloroplast)
            [Catharanthus roseus] AGI51203.1 hypothetical chloroplast
            RF1 (chloroplast) [Catharanthus roseus]
          Length = 1748

 Score =  410 bits (1053), Expect = e-127
 Identities = 228/385 (59%), Positives = 266/385 (69%), Gaps = 27/385 (7%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQ--KSNNLNNEFRNRIEALDDKYFFLDRIETRTR 903
            K+KIS  T++K    Q DN W++ N    K NN+N EFRNRIEALD +  FLD +ETRTR
Sbjct: 372  KRKISWSTIEKTHSNQFDNYWVFSNNINIKGNNINKEFRNRIEALDKESLFLDILETRTR 431

Query: 902  LCNDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTD 723
            L NDDTK EY P MYDPFLNG YRG   K+       +IEN ++ +GINR+++IL P  D
Sbjct: 432  LYNDDTKTEYFPKMYDPFLNGTYRGVTMKKGGSPYKLTIENLRETLGINRVYAILFPDPD 491

Query: 722  SQE---------------LINEIITDANDQKIRK--KYIGIKEISKKTPRWSYKLITELE 594
            SQE               L N +    NDQKI K  + IG+KEISKK PRWSYKLIT+LE
Sbjct: 492  SQEFKQKPDAFYFDKKQFLFNAVGPHTNDQKIPKDKESIGLKEISKKVPRWSYKLITDLE 551

Query: 593  QQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETS--DRTDELALIRYSQQ 420
            QQSGEY E +P+ HQIRSRKAKRVVIFT NKQ+ D NT N +T+  D  +E+AL RYSQQ
Sbjct: 552  QQSGEYPENIPVQHQIRSRKAKRVVIFTANKQNPDSNTNNKDTNPTDPRNEVALPRYSQQ 611

Query: 419  SDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFRNWL 240
            SDFRRGIIKGSMRAQRRKI IWELFQAN  SPLFLDRIK++S FSFDI E++K +F NW 
Sbjct: 612  SDFRRGIIKGSMRAQRRKIVIWELFQANARSPLFLDRIKRNSWFSFDISEIIKVIFTNWT 671

Query: 239  KGGAEVKVGEY------AXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQSI 78
              G + +  EY                   E  ++EIAEAWDT+PFAQ IRG MLITQSI
Sbjct: 672  GKGVQSESVEYIDEETKKEEKNKKEENKRKEQTRIEIAEAWDTIPFAQVIRGSMLITQSI 731

Query: 77   LRKYFLLPSLIIAKNIGRILLFQLP 3
            LRKY LLPS IIAKNIGR+LL Q P
Sbjct: 732  LRKYILLPSFIIAKNIGRMLLLQFP 756


>YP_004935725.1 ycf1 protein (chloroplast) [Sesamum indicum] AEO92765.1 ycf1 protein
            (chloroplast) [Sesamum indicum] AGL45394.1 Ycf1
            (chloroplast) [Sesamum indicum]
          Length = 1789

 Score =  402 bits (1034), Expect = e-124
 Identities = 236/407 (57%), Positives = 263/407 (64%), Gaps = 49/407 (12%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            K +IS  TL+K    +L NPW+YINKQK  N N EF NRIEALD K   L+ +ETRTRLC
Sbjct: 423  KTRISPRTLEKASSNELYNPWVYINKQKEINFNKEFLNRIEALDKKSISLNILETRTRLC 482

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTDSQ 717
            NDD  KEYL   YDPFLNG YR TI    S+   T IENF ++ GINRIH ILLP TD Q
Sbjct: 483  NDDYTKEYLSKSYDPFLNGSYRRTIYISPSILKKTFIENFIEKFGINRIHGILLPNTDYQ 542

Query: 716  E------------LINEII---------------TDANDQKIRKKYIGIKEISKKTPRWS 618
            E            L  EI+               T+ ND+KI  K I IKEISKK PRWS
Sbjct: 543  EFEEKVNRFDKKPLSTEIVDFLTFISKFVRESESTNPNDEKINTKSIRIKEISKKVPRWS 602

Query: 617  YKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTD----PNTTNTETSDRTD 450
            YKLITELEQ+SGE+QE VP+ H+IRSRKAK+VVIFTD KQDTD     NTT+T T D TD
Sbjct: 603  YKLITELEQESGEHQEGVPVDHEIRSRKAKQVVIFTDIKQDTDTNTNTNTTDTNTPDETD 662

Query: 449  ELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFE 270
            E+ LIRYSQQSDF R IIKGSMRAQRRKI IW+LFQ N HSPLFLDRIKK   FSFDI  
Sbjct: 663  EVTLIRYSQQSDFERDIIKGSMRAQRRKIVIWKLFQTNAHSPLFLDRIKKLHLFSFDISG 722

Query: 269  LMKPLFRNWLKGGAEVKVGEYA-----------------XXXXXXXXXXXXEIVQMEIAE 141
            L+K +FRNWL  G   K+ EY                              E  ++EIAE
Sbjct: 723  LIKLIFRNWLGKGKAFKIVEYTEKQAKMEEQAKIEEKKWKNKIKEEKNKIKEQARIEIAE 782

Query: 140  AWDT-LPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             WDT LPF+Q IRG ML+T SI RKY L PSLIIAKNIGRI LFQ P
Sbjct: 783  FWDTVLPFSQGIRGCMLLTHSIFRKYILFPSLIIAKNIGRIFLFQRP 829


>YP_009255665.1 ycf1 protein (chloroplast) [Cornus controversa] AND96884.1 ycf1
            protein (chloroplast) [Cornus controversa]
          Length = 1822

 Score =  387 bits (994), Expect = e-119
 Identities = 220/397 (55%), Positives = 267/397 (67%), Gaps = 39/397 (9%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            +KK+ L T++K+   +L N WIY N +K+ NL++EF NRIEALD     LD +E +TRLC
Sbjct: 391  QKKMPLSTIEKLSADELYNHWIYTNDEKTKNLSSEFINRIEALDRGSLSLDILEKKTRLC 450

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSII--TSIENFKKRVGINRIHSILLPYTD 723
            ND+TKKEYLP MYDPFLNG  RG IKK FS SII  TSIENF + + IN+IH IL   TD
Sbjct: 451  NDETKKEYLPKMYDPFLNGSSRGIIKKGFSPSIINETSIENFIETIWINKIHGILFTDTD 510

Query: 722  SQE---------------------------LINEIITDANDQKIRKKYIGIKEISKKTPR 624
             +E                           L N II D ND+K+RKK I I+EISKK PR
Sbjct: 511  YREFEQKIDTFDKKPLSTDRRINGAKFLKFLFNAIINDPNDKKMRKKSIEIQEISKKVPR 570

Query: 623  WSYKLITELEQQSG-EYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTDE 447
            WSYKLI +LEQQ   E QE+  ++ ++R+RKAKRVVIFT+N+QD D +  N   S++ DE
Sbjct: 571  WSYKLINDLEQQQERENQEDGAVHQRMRARKAKRVVIFTNNQQDVDTDINN---SNQKDE 627

Query: 446  LALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFEL 267
            +ALIRYSQQSDFRR IIKGSMRAQRRKI IWELFQANVHSP+FLDRI KS  FSFDI  L
Sbjct: 628  VALIRYSQQSDFRRNIIKGSMRAQRRKIVIWELFQANVHSPIFLDRIDKSLLFSFDISRL 687

Query: 266  MKPLFRNWLKGGAEVKVGEY---------AXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQ 114
            MK +F+NW+    E K+ +Y                      E  ++EIAEAWD +P AQ
Sbjct: 688  MKLIFKNWMGKKEEFKILDYKEEQIKEGEKKEKDKKDENKRKEKTRIEIAEAWDNIPLAQ 747

Query: 113  RIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             +RG++L+TQ+I RKY L PSLIIAKNI RILL QLP
Sbjct: 748  VLRGFLLVTQAIFRKYILFPSLIIAKNISRILLLQLP 784


>ADD30914.1 putative RF1 protein (chloroplast) [Cornus florida]
          Length = 1867

 Score =  387 bits (993), Expect = e-118
 Identities = 225/392 (57%), Positives = 266/392 (67%), Gaps = 34/392 (8%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            +KK+SL T++  P  +L N WIY N++KS NL+NEF NRIEALD     L+ +E +TRLC
Sbjct: 437  QKKMSLYTIENPPSDELYNNWIYTNEEKSKNLSNEFINRIEALDGGSLSLNLLEKKTRLC 496

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSII--TSIENFKKRVGINRIHSILLPYTD 723
            ND+T++EYLP MYDPFLNG  RGTIKK FS SII  T IENF +++ IN+IH IL   TD
Sbjct: 497  NDETRQEYLPKMYDPFLNGSSRGTIKKGFSPSIINETYIENFIEKIWINKIHGILFTDTD 556

Query: 722  SQE---------------------------LINEIITDANDQKIRKKYIGIKEISKKTPR 624
             +E                           L N II D NDQK+RKK I I+EI KK PR
Sbjct: 557  YREFEQKINTFDKKLLSIDKRIDGAKFLKFLFNGIINDPNDQKMRKKSIEIQEIIKKVPR 616

Query: 623  WSYKLITELEQQSG-EYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTDE 447
            WSYKLI +LEQQ   E +E+  +  QIRSRKAKRVVIFT+N+Q+ D   T TE S++ DE
Sbjct: 617  WSYKLINDLEQQQERENEEDGTVQQQIRSRKAKRVVIFTNNQQNID---TETENSNQKDE 673

Query: 446  LALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFEL 267
            +ALIRYSQQSDFRR IIKGSMRAQRRKI I ELFQANVHSPLFLDRI KS  FSFDI  L
Sbjct: 674  VALIRYSQQSDFRRNIIKGSMRAQRRKIVIEELFQANVHSPLFLDRIDKSLLFSFDISRL 733

Query: 266  MKPLFRNWLKGGAEVKVGEYA----XXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGY 99
            MK + +N +    E K+ +Y                 E  ++EIAEAWDT+P AQ IRG 
Sbjct: 734  MKLILKNGMGKKEEFKILDYTEEPIKEGKKKEENKRKEKTRIEIAEAWDTIPLAQVIRGS 793

Query: 98   MLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
            ML+TQSI RKY +LPSLIIAKNIGRILL Q P
Sbjct: 794  MLVTQSIFRKYIILPSLIIAKNIGRILLLQFP 825


>XP_011081446.1 PREDICTED: LOW QUALITY PROTEIN: protein TIC 214 [Sesamum indicum]
          Length = 1759

 Score =  381 bits (979), Expect = e-117
 Identities = 225/402 (55%), Positives = 257/402 (63%), Gaps = 44/402 (10%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            K +IS  TL+K    +L NPW+YINKQK  N N EF NRIEALD K   L+ +ETRTRLC
Sbjct: 377  KTRISPRTLEKASSNELYNPWVYINKQKEINFNKEFLNRIEALDKKSISLNILETRTRLC 436

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTDSQ 717
            ND+  + YL   Y PFLNG YR TI    S+   T IENF ++ GINRIH ILLP TD Q
Sbjct: 437  NDNYXQRYLSKSYGPFLNGSYRRTIYISPSILKKTFIENFIEKFGINRIHGILLPNTDYQ 496

Query: 716  E------------LINEII---------------TDANDQKIRKKYIGIKEISKKTPRWS 618
            E            L  EI+               T+ ND+KI  K I IKEISKK PRWS
Sbjct: 497  EFEEKVNRFDKKPLSTEIVDFLTFISKFVRESESTNPNDEKINTKSIRIKEISKKVPRWS 556

Query: 617  YKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNT----TNTETSDRTD 450
            YKLI+ELE ++ E+QE VP+ H+I SRKAK+VVIFTD KQDTD NT    T+T T D TD
Sbjct: 557  YKLISELEXKNREHQEGVPVDHEIHSRKAKQVVIFTDIKQDTDTNTNTNTTDTNTLDETD 616

Query: 449  ELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFE 270
            E+ LIRYSQ S+F R IIKGSMRAQRRKI IW+LFQ N HSPLFLDRIKK   FSFDI  
Sbjct: 617  EVTLIRYSQXSNFERDIIKGSMRAQRRKIVIWKLFQTNAHSPLFLDRIKKLHLFSFDISG 676

Query: 269  LMKPLFRNWLKGGAEVKVGEYA------------XXXXXXXXXXXXEIVQMEIAEAWDT- 129
            L+K +FRNWL  G   K+ EY                         E  ++EIAE WDT 
Sbjct: 677  LIKLIFRNWLGKGKAFKIVEYTERKQKWKSKQKXKKKMEEKKNKIKEQARIEIAEFWDTV 736

Query: 128  LPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
            LPF+Q IRG ML+T SI RKY L PSLIIAKNIGRI LFQ P
Sbjct: 737  LPFSQGIRGCMLLTHSIFRKYILFPSLIIAKNIGRIFLFQRP 778


>YP_004940568.1 ycf1 gene product (chloroplast) [Dorcoceras hygrometricum] AEK53288.1
            hypothetical chloroplast RF19 (chloroplast) [Dorcoceras
            hygrometricum]
          Length = 1823

 Score =  379 bits (973), Expect = e-116
 Identities = 217/382 (56%), Positives = 253/382 (66%), Gaps = 44/382 (11%)
 Frame = -3

Query: 1016 WIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLCNDDTKKEYLPIMYDPFLNGP 837
            W+YINKQ+  NLNNEF NRIEALD KY  L+  ETR RLCND + KEYL   YDPFLNG 
Sbjct: 431  WVYINKQRGENLNNEFFNRIEALDKKYISLNIFETRIRLCNDYSPKEYLSKEYDPFLNGS 490

Query: 836  YRGTIKKRFSLSII--TSIENFKKRVGINRIHSILLPYTDSQE------------LINEI 699
            YR T+ K  S SI+  TSI+NF  +  INRIH ILL  T  QE            L  E+
Sbjct: 491  YRRTLHKNLSPSILKKTSIDNFLNQFRINRIHGILLLDTALQEVEEKMNRFAKKPLSTEM 550

Query: 698  IT-------------------------DANDQKIRKKYIGIKEISKKTPRWSYKLITELE 594
            I                          D NDQKIR K I IKEI KK PRW+YKLIT+LE
Sbjct: 551  IDFLTFISKIDSEKKTKYLNSFYLVNKDTNDQKIRSKSIKIKEIIKKVPRWTYKLITDLE 610

Query: 593  QQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTT-NTETSDRTDELALIRYSQQS 417
            QQSGE+QE+VP+ HQIRSRK KRVVIFT NKQDTDPNT  +T   D+TDE+AL+RYSQQS
Sbjct: 611  QQSGEHQEDVPVDHQIRSRKGKRVVIFTGNKQDTDPNTNKDTNIPDQTDEVALMRYSQQS 670

Query: 416  DFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFRNWLK 237
            DFRRGIIKGSMRAQRRKI IW+ FQANV +PLFL+R++K   FSFDI  L+K + +NW++
Sbjct: 671  DFRRGIIKGSMRAQRRKIVIWKFFQANVQAPLFLNRMQKYLLFSFDISGLIKEILQNWVR 730

Query: 236  GGAEVKVGEY----AXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQSILRK 69
                 K  EY                 E  +++I+EAWD++PF Q IRG ML+TQSI RK
Sbjct: 731  KRKVFKNVEYTEEQTKRKEKNEENKRKEKGRIDISEAWDSIPFTQVIRGCMLVTQSIFRK 790

Query: 68   YFLLPSLIIAKNIGRILLFQLP 3
            Y L P LIIAKNIGRI+L QLP
Sbjct: 791  YILFPFLIIAKNIGRIVLLQLP 812


>YP_008964091.1 hypothetical chloroplast RF1 [Ajuga reptans] AHA84953.1 hypothetical
            chloroplast RF1 (plastid) [Ajuga reptans]
          Length = 1801

 Score =  378 bits (970), Expect = e-115
 Identities = 215/393 (54%), Positives = 259/393 (65%), Gaps = 35/393 (8%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTR-- 903
            K+KIS   L+K  F +L   W+Y NKQ+  + NNEF NRI+ALD +   L+R+ETRTR  
Sbjct: 429  KRKISPPILEKFSFNELYPTWVYTNKQRGKSFNNEFINRIKALDKEDNSLNRLETRTRTR 488

Query: 902  LCNDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSII--TSIENFKKRVGINRIHSILLPY 729
            LCNDD+ KEYL   YDPFLN  YR TI K+   S +  T IENF  + GINRIH ILL  
Sbjct: 489  LCNDDSTKEYLSKRYDPFLNRSYRKTISKKLLPSTLKKTLIENFINKFGINRIHGILLTD 548

Query: 728  TDSQE---------------------------LINEIITDANDQKIRKKYIGIKEISKKT 630
             D QE                           L+ + +TDAN  KI +K + IKEI KK 
Sbjct: 549  VDYQEQEFEKKKTRFDKNPLSTEIKERKYFKYLVTKTVTDANGLKISRKSVRIKEIGKKI 608

Query: 629  PRWSYKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTD 450
            PRWSYKLIT+LEQ SGEYQE+VP+ HQIRSRK KRV+IFT NK++  P  T+ +  D+ D
Sbjct: 609  PRWSYKLITDLEQHSGEYQEDVPVEHQIRSRKGKRVIIFTANKENIGP--TDPDEIDQRD 666

Query: 449  ELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFE 270
            E  LIRYSQQSDFR GIIKGSMR+QRRKI I++LFQANVHSPLFL+R++K + FSFDI  
Sbjct: 667  EAFLIRYSQQSDFRHGIIKGSMRSQRRKIFIFKLFQANVHSPLFLERLQKRTLFSFDISG 726

Query: 269  LMKPLFRNWLKGGAEVKVGEY----AXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRG 102
            L+K +FRNW+      K  EY                 E  Q++IAEAW+ +PFAQ IRG
Sbjct: 727  LIKLIFRNWVSKEEAFKFVEYTKEQTKREEKNEKNKRKEKAQIQIAEAWENIPFAQAIRG 786

Query: 101  YMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             ML+TQSI RKY LLPS IIAKN+GRILL QLP
Sbjct: 787  CMLLTQSIFRKYILLPSFIIAKNLGRILLLQLP 819


>YP_008994344.1 hypothetical chloroplast RF19 [Melianthus villosus] AGS13063.1
            hypothetical chloroplast RF19 (plastid) [Melianthus
            villosus]
          Length = 1845

 Score =  373 bits (958), Expect = e-114
 Identities = 218/410 (53%), Positives = 263/410 (64%), Gaps = 52/410 (12%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            K+KISL T +K+   +L N W Y N+QK++N+NNEF NRIEALD K    D +E +TRLC
Sbjct: 418  KRKISLFTTEKLSSRELYNQWSYNNEQKTSNVNNEFLNRIEALDKKSRLRDVLEKKTRLC 477

Query: 896  N--DDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITS--IENFKKRVGINRIHSILLP- 732
            N  D+TKKEY P +YDPFLNG YRG IKK FS SIIT   I+NF +   IN++HS+LL  
Sbjct: 478  NCNDETKKEYFPKIYDPFLNGSYRGRIKKSFSPSIITKVYIKNFIEMFCINKMHSLLLTP 537

Query: 731  ---------------------------YTDSQE-----------LINEIITDANDQKIRK 666
                                       +T+ ++           L N +ITD   QK +K
Sbjct: 538  TMNSYKLEHKMDRFDRKSLSREKILSLFTEHEQGKIYSEDQIIFLFNAVITD---QKKKK 594

Query: 665  KYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTD- 489
            K IGI EI KK PRWSYKLI +LEQQ GE +E+VP  H+IRSRKAKRVVIFTDN Q+TD 
Sbjct: 595  KSIGINEIHKKVPRWSYKLIDDLEQQEGESEEKVPEDHEIRSRKAKRVVIFTDNPQNTDI 654

Query: 488  -PNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLD 312
              NT +T   D+ DE+ALIRYSQQSDFRR IIKGS+RAQRRKI  WEL Q NVHSPLFLD
Sbjct: 655  SSNTNDTNNIDQADEVALIRYSQQSDFRRDIIKGSIRAQRRKIVTWELVQTNVHSPLFLD 714

Query: 311  RIKKSSPFSFDIFELMKPLFRNWLKGGAEVKVGEYA-------XXXXXXXXXXXXEIVQM 153
            RI+K   F FDI  +MK +FRNW+    + K  +Y                    E  ++
Sbjct: 715  RIEKPLFFLFDISGMMKLIFRNWIGKNTKFKFSDYTEKKTKEHQKNEEDKKEKREEKARI 774

Query: 152  EIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
            EIAE WDT+ FAQ IR  +L+TQSI RKY +LPSLIIAKNIG +LLFQ P
Sbjct: 775  EIAEIWDTILFAQVIRSSLLVTQSIFRKYIILPSLIIAKNIGCMLLFQFP 824


>YP_009108647.1 Ycf1 [Echites umbellatus] AIW05322.1 Ycf1 (plastid) [Echites
            umbellatus]
          Length = 1801

 Score =  368 bits (944), Expect = e-112
 Identities = 214/397 (53%), Positives = 255/397 (64%), Gaps = 39/397 (9%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFY--QLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTR 903
            K+K+S  T+DK  F     DN WIY N +K N  + EF+NRIEALD K  FLD +ETRTR
Sbjct: 421  KRKVSWSTIDKASFNFNDFDNHWIYSNNRKGNKTSKEFKNRIEALDQKSLFLDILETRTR 480

Query: 902  LCNDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTD 723
            LCND+ K +Y P +YDPFLNG YR T+ KR S  +     + ++  GINRI++IL P  D
Sbjct: 481  LCNDENKNKYFPKVYDPFLNGTYRLTMTKRVSPYLYKG--SIEETFGINRIYAILSPDPD 538

Query: 722  SQEL-------------------------INEIITDANDQKIRKKYIG----IKEISKKT 630
             QE                          +N I T  NDQKI K+ I     IKEISKK 
Sbjct: 539  YQEFERKTDTFDKKPFLIELDNFLTFLLNLNVIKTHTNDQKIPKESIKESIEIKEISKKV 598

Query: 629  PRWSYKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTD 450
            PRWSYKLIT+LEQQSGE QE   + HQIRSRK K VVIFT N ++TD    +T  +D  +
Sbjct: 599  PRWSYKLITDLEQQSGEDQENALVEHQIRSRKVKPVVIFTANNENTD----STNPTDPIN 654

Query: 449  ELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFE 270
            E++L+RYSQQSDFRRGIIKGSMRAQRRKI IWELFQA VHSPLFLDRIK+    SFDI E
Sbjct: 655  EVSLLRYSQQSDFRRGIIKGSMRAQRRKILIWELFQATVHSPLFLDRIKRPLRLSFDIAE 714

Query: 269  LMKPLFRNWLKGGAEVKVGEY--------AXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQ 114
            ++K +F NW   G E ++ E+                     E  ++EIAEAWD +  AQ
Sbjct: 715  ILKVIFTNWTGKGVESEIVEHIDIDEERKKEEKTKKEESLRKEQTRIEIAEAWDNITCAQ 774

Query: 113  RIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             IRG MLITQSILRKY +LPSLIIAKNIGR+LL QLP
Sbjct: 775  TIRGCMLITQSILRKYIVLPSLIIAKNIGRMLLLQLP 811


>ADH94401.1 hypothetical chloroplast RF1 (chloroplast) [Syzygium cumini]
          Length = 1877

 Score =  362 bits (930), Expect = e-110
 Identities = 209/413 (50%), Positives = 260/413 (62%), Gaps = 55/413 (13%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            +KKISLLT +K+PF +L + WIY N+QK NNL+ +FRN++E  +     LD +E RTRLC
Sbjct: 432  QKKISLLTREKLPFDELYDHWIYTNEQKKNNLSKKFRNQMETRNKGSITLDVLEKRTRLC 491

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIIT--SIENFKKRVGINRIHSILL---- 735
            ND+ KKEYLP +YDPFL GP RG +K  FS  I+   SI+N+ +   IN+IH IL     
Sbjct: 492  NDENKKEYLPKIYDPFLKGPGRGRVKFFFSSQILNKISIKNYIETGWINKIHVILFNTDQ 551

Query: 734  ------------------------PYTDSQE--------------LINEIITDANDQKIR 669
                                    P+ ++++                N +IT+   ++I+
Sbjct: 552  ENLEKQIDAFDRNSLSTEKKLYLFPFPETEQGRINSEDQIKILKIFFNAVITEPKTKRIK 611

Query: 668  KKYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTD 489
            KK IGIKEIS K P WSYKLI +LEQQ GE +E V   HQIRSRKAKRVVIFTDN Q+TD
Sbjct: 612  KKSIGIKEISTKVPPWSYKLINDLEQQEGENEENVAEDHQIRSRKAKRVVIFTDNHQNTD 671

Query: 488  PNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDR 309
             N+ NT   D+ DE+ALIRYSQQSDFRR IIKGSMRAQRRK    ELFQANVHSPLFLDR
Sbjct: 672  ANSKNTNNPDQADEVALIRYSQQSDFRRDIIKGSMRAQRRKTVTCELFQANVHSPLFLDR 731

Query: 308  IKKSSPFSFDIFELMKPLFRNWL-KGGAEVKVGEYA----------XXXXXXXXXXXXEI 162
            I K   FSFDI  ++K + +NW+ K   E+++ +Y                       E 
Sbjct: 732  IDKPL-FSFDISGMIKFILKNWMYKKTTELRISDYTQEKKKENEKKKEEDKREEYKRQEK 790

Query: 161  VQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             Q+EIAEAWD + FAQ IRG +L+TQS +RKY L PSLIIAKNI R+LLFQ P
Sbjct: 791  AQIEIAEAWDRVLFAQAIRGSLLVTQSFIRKYILFPSLIIAKNIARMLLFQFP 843


>YP_009166744.1 hypothetical chloroplast RF19 (chloroplast) [Tanaecium
            tetragonolobum] ALB78312.1 hypothetical chloroplast RF19
            (chloroplast) [Tanaecium tetragonolobum]
          Length = 1145

 Score =  353 bits (907), Expect = e-109
 Identities = 204/378 (53%), Positives = 247/378 (65%), Gaps = 20/378 (5%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDK--YFFLDRIETRTR 903
            K++IS  TL+K    +LDNPW+Y NKQK  N NNEF NRIEALD K  Y  LD +ETRTR
Sbjct: 432  KRRISPHTLEKSSSNELDNPWVYTNKQKVKNFNNEFLNRIEALDKKKKYILLDILETRTR 491

Query: 902  LCNDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIITSIENFKKRVGINRIHSILLPYTD 723
            LCNDD+KKEYL   YDPFLNG YR TI K  S SI+T   NF + +G NRIH +LLP TD
Sbjct: 492  LCNDDSKKEYLSQRYDPFLNGSYRRTIYK--SPSILT---NFIEELGKNRIHGLLLPDTD 546

Query: 722  SQE----------LINEIITDANDQKIRKKYIGIKEISKKTPRWSYKLITELEQQSGEYQ 573
              E          L  EI+TDAN+  I +K    +E+SKK PRWS  LITELEQ+S EY 
Sbjct: 547  YHEFEQKINGFEPLSTEIVTDANE--ISRKS---EEMSKKVPRWSSNLITELEQESDEYP 601

Query: 572  EEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTDELALIRYSQQSDFRRGIIK 393
            EE P  H+IR+RKAKRVVIFT N++D DP     + SD  +E+AL+RYSQ+SDFRR +IK
Sbjct: 602  EEAPDDHEIRTRKAKRVVIFTINEEDLDPTIVKPDASDEPEEVALMRYSQKSDFRRSLIK 661

Query: 392  GSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFD----IFELMKPLFRNWLKGGAE 225
            GSMRAQRRK+ IW  +Q +VHSPLFLD+I+K   F FD    +   +  +FRNW++ G  
Sbjct: 662  GSMRAQRRKMGIWLFYQPHVHSPLFLDKIRKFPFFYFDDISGMINRIFRIFRNWVRKGEA 721

Query: 224  VKVGEYA----XXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLL 57
             K+ EY                 E  +MEIAEAWD  P  Q IR  +L++ S  RKY   
Sbjct: 722  FKIVEYTEQQPKREEKKETNRKGEEARMEIAEAWDDFPCGQAIRSLLLLSHSFSRKYIRF 781

Query: 56   PSLIIAKNIGRILLFQLP 3
            PS IIAKNIGR+LL Q P
Sbjct: 782  PSFIIAKNIGRMLLLQRP 799


>YP_008578231.1 hypothetical chloroplast RF1 (chloroplast) [Stockwellia quadrifida]
            AGC59640.1 hypothetical chloroplast RF1 (chloroplast)
            [Stockwellia quadrifida]
          Length = 1868

 Score =  358 bits (919), Expect = e-108
 Identities = 204/413 (49%), Positives = 262/413 (63%), Gaps = 55/413 (13%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            ++K+ LLT++K+P   L + WIY N+QK NNL+ +F+NR+EAL+      D  E RT+LC
Sbjct: 421  QRKMDLLTIEKLPSDDLYDHWIYTNEQKKNNLSKKFKNRMEALNKGSIIRDVFEKRTKLC 480

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIIT--SIENFKKRVGINRIHSILL---- 735
            ND+ KKEYLP +YD FLNGP RG +K  FS  I+   SI+N+ +   IN+IH IL     
Sbjct: 481  NDENKKEYLPKIYDDFLNGPCRGRVKFFFSSPILNKISIKNYIETGWINKIHGILFTTNE 540

Query: 734  ------------------------PYTDSQE--------------LINEIITDANDQKIR 669
                                    P+ ++++                NE+IT+   ++I+
Sbjct: 541  ENFEEKIDGFDRNSLSTEKKLSLFPFPETEQGRIHSEDQIKILKIFFNEVITEPKTKRIK 600

Query: 668  KKYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTD 489
            KK IGIKEI+KK P WSYKLI +LEQQ GE +E V   HQIRSR+AKRV+IFTDN Q+TD
Sbjct: 601  KKSIGIKEITKKVPPWSYKLINDLEQQEGETEENVAEDHQIRSRRAKRVIIFTDNHQNTD 660

Query: 488  PNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDR 309
             N+ NT  +D+ DE+ALIRYSQQSDFRR IIKGSMRAQRRK  I EL QANVHSPLFLDR
Sbjct: 661  ANSKNTNNTDQADEVALIRYSQQSDFRRDIIKGSMRAQRRKTIICELVQANVHSPLFLDR 720

Query: 308  IKKSSPFSFDIFELMKPLFRNWL-KGGAEVKVGEYA----------XXXXXXXXXXXXEI 162
            I K   FSFDI  ++K + +NW+ K   E+++ +Y                       E 
Sbjct: 721  IDKPL-FSFDISGMIKFILKNWMYKKTTELRISDYTEEKTKESEKKKEEEKREEYKREEK 779

Query: 161  VQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             ++EIAEAWD++ FAQ IRG +L+TQS LRKY L PSLIIAKNI R+LLFQ P
Sbjct: 780  ARIEIAEAWDSILFAQVIRGSLLVTQSFLRKYILFPSLIIAKNIARMLLFQFP 832


>YP_008575426.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus verrucata]
            AGC56665.1 hypothetical chloroplast RF1 (chloroplast)
            [Eucalyptus verrucata]
          Length = 1874

 Score =  356 bits (914), Expect = e-108
 Identities = 206/413 (49%), Positives = 255/413 (61%), Gaps = 55/413 (13%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            ++KISLLT +K+P  +L N WIY N QK NNL+ +FRNR+E L+     LD  E RTRLC
Sbjct: 428  ERKISLLTREKLPSDELYNHWIYTNDQKKNNLSKKFRNRMETLNKGSITLDGFEKRTRLC 487

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIIT--SIENFKKRVGINRIHSILL---- 735
            ND+ KKEYLP +YDPFLNGP RG +K  FS  I+   SI+N+ +   IN+IHSIL     
Sbjct: 488  NDENKKEYLPKIYDPFLNGPCRGRVKIFFSSQILNKMSIKNYIETGWINKIHSILFTTDQ 547

Query: 734  ------------------------PYTDSQE--------------LINEIITDANDQKIR 669
                                    P+ ++++                N +IT+   ++I+
Sbjct: 548  EKFEEKMDAFDKNSLSTEKKLSLFPFPETEQGRIHSEDQIKFLKIFFNAVITEPKTKRIK 607

Query: 668  KKYIGIKEISKKTPRWSYKLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTD 489
            KK IGIKEISKK P WSYKLI +LEQQ GE +E V   HQIRSRK K V+IFTDN Q+TD
Sbjct: 608  KKSIGIKEISKKVPSWSYKLINDLEQQEGENEEIVAEDHQIRSRKTKHVLIFTDNDQNTD 667

Query: 488  PNTTNTETSDRTDELALIRYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDR 309
             N+ NT   D  DE+  IRYSQQSDFRR IIKGSMRAQRRK  I ELFQANVHSPLFLDR
Sbjct: 668  ANSKNTNNLDEADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDR 727

Query: 308  IKKSSPFSFDIFELMKPLFRNW-LKGGAEVKVGEYA----------XXXXXXXXXXXXEI 162
            I KS  FSFDI  ++K + + W  K   E+++ +Y                       E 
Sbjct: 728  IGKSL-FSFDISGMIKFILKKWTYKKTTELRISDYTEEKKKENEKKKEEEKREEYKRQEK 786

Query: 161  VQMEIAEAWDTLPFAQRIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             ++EIA+ WD + FAQ IRG +L+TQS LRKY L PS+IIAKNI R+LLFQ P
Sbjct: 787  ARIEIAQTWDRVLFAQAIRGSLLVTQSFLRKYILFPSVIIAKNIARMLLFQFP 839


>YP_009179128.1 Ycf1 (chloroplast) [Salix babylonica] ALK27060.1 Ycf1 (chloroplast)
            [Salix babylonica]
          Length = 1813

 Score =  355 bits (910), Expect = e-107
 Identities = 209/397 (52%), Positives = 263/397 (66%), Gaps = 39/397 (9%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            ++K+SL T +K+   +L N W Y N+QK  NL+NEF NR+E LD  +  L+ +E +TRLC
Sbjct: 429  QRKMSLFTTEKLSSDELYNHWNYNNEQKKKNLSNEFINRVEVLDKGFRVLNILEKKTRLC 488

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIIT--SIENFKKRVGINRIHSILL---- 735
            ND+TKKEYLP +YDPFL+G YRG +   FS SII   SI+N+ + + IN+I+ ILL    
Sbjct: 489  NDETKKEYLPKIYDPFLSGLYRGKVHFFFSPSIINEISIKNYIEMLWINKIYLILLISNY 548

Query: 734  ----PYTDSQELI-------NEIITDANDQKIRKKYIGIK-EISKKTPRWSYKLITELEQ 591
                P  D ++ I       N II D+ ++KI KK   IK EISK+ PRWSYKLI +LEQ
Sbjct: 549  QEFEPKIDEEDRIRILKFVFNAIIVDSKNKKITKKSTEIKKEISKQIPRWSYKLIDDLEQ 608

Query: 590  QSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTN------TETSDRTDELALIRY 429
            Q GE +E     H+IRSRKAKRVVIFTDN+++ D NT N      T   D+T E+ALIRY
Sbjct: 609  QEGENEENAAEDHEIRSRKAKRVVIFTDNQENPDSNTYNNSKTKDTTNFDQTGEVALIRY 668

Query: 428  SQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFR 249
            SQQSDFRR IIKGSMR QRRKI I +LFQAN+HSPLFLDRI+K   F+FD  ELMK +F 
Sbjct: 669  SQQSDFRRDIIKGSMRTQRRKIAILKLFQANLHSPLFLDRIEKFLFFAFDTSELMKIMFI 728

Query: 248  NWLKGGAEVKVG---------------EYAXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQ 114
            NW++  +E  +                E A            E V++EIAE WD++ FAQ
Sbjct: 729  NWMRKKSEFTISDSTYTEEKTKESDKKEKAESKNRREEDKREEKVRIEIAETWDSIIFAQ 788

Query: 113  RIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             IRG +L+ QSILRKY LLPSLIIAKNI R+LLFQ+P
Sbjct: 789  AIRGCVLVIQSILRKYILLPSLIIAKNIIRMLLFQIP 825


>YP_008575596.1 hypothetical chloroplast RF1 (chloroplast) [Eucalyptus diversifolia]
            AGC56835.1 hypothetical chloroplast RF1 (chloroplast)
            [Eucalyptus diversifolia]
          Length = 1857

 Score =  354 bits (909), Expect = e-107
 Identities = 205/395 (51%), Positives = 250/395 (63%), Gaps = 37/395 (9%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            ++KISLLT +K+P  +L N WIY N QK NNL+ +FRNR+E  +     LD  E RTRLC
Sbjct: 428  ERKISLLTREKLPSDELYNHWIYTNDQKKNNLSKKFRNRMETRNKGSITLDVFEKRTRLC 487

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIIT--SIENFKKRVGINRIHSILLPYTD 723
            ND+ KKEYLP +YD FLNGP RG +K  FS  I+   SI+N+ +   IN+IHSIL  +T 
Sbjct: 488  NDENKKEYLPKIYDAFLNGPCRGRVKIFFSSQILNKMSIKNYIETGWINKIHSIL--FTT 545

Query: 722  SQE------------------------LINEIITDANDQKIRKKYIGIKEISKKTPRWSY 615
             QE                          N +IT+   ++I+KK IGIKEISKK P WSY
Sbjct: 546  DQEKFEEKMDAFDKNSLSTDQIKILKIFFNAVITEPKTKRIKKKSIGIKEISKKVPSWSY 605

Query: 614  KLITELEQQSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTNTETSDRTDELALI 435
            KLI +LEQQ GE +E V   HQIRSRK K V+IFTDN Q+TD N+ NT   D  DE+  I
Sbjct: 606  KLINDLEQQEGENEEIVAEDHQIRSRKTKDVLIFTDNDQNTDANSKNTNNLDEADEVTFI 665

Query: 434  RYSQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPL 255
            RYSQQSDFRR IIKGSMRAQRRK  I ELFQANVHSPLFLDRI K   FSFDI  ++K +
Sbjct: 666  RYSQQSDFRRDIIKGSMRAQRRKTVICELFQANVHSPLFLDRIGKPL-FSFDISGMIKFI 724

Query: 254  FRNW-LKGGAEVKVGEYA----------XXXXXXXXXXXXEIVQMEIAEAWDTLPFAQRI 108
             + W  K   E+++ +Y                       E  ++EIA+ WD + FAQ I
Sbjct: 725  LKKWTYKKTTELRISDYTEEKKKENEKKKEEEKREEYKRQEKARIEIAQTWDRVLFAQAI 784

Query: 107  RGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
            RG +L+TQS LRKY L PS+IIAKNI R+LLFQ P
Sbjct: 785  RGSLLVTQSFLRKYILFPSVIIAKNIARMLLFQFP 819


>YP_009121532.1 hypothetical protein RF1 (chloroplast) [Salix suchowensis]
            YP_009128706.1 ycf1 (chloroplast) [Salix purpurea]
            AJF48491.1 hypothetical protein RF1 (chloroplast) [Salix
            suchowensis] AJR28193.1 ycf1 (chloroplast) [Salix
            purpurea]
          Length = 1807

 Score =  354 bits (908), Expect = e-107
 Identities = 208/397 (52%), Positives = 263/397 (66%), Gaps = 39/397 (9%)
 Frame = -3

Query: 1076 KKKISLLTLDKIPFYQLDNPWIYINKQKSNNLNNEFRNRIEALDDKYFFLDRIETRTRLC 897
            ++K+SL T +K+   +L N W Y N+QK  NL+NEF NR+E LD  +  L+ +E +TRLC
Sbjct: 429  QRKMSLFTTEKLSSDELYNHWNYNNEQKKKNLSNEFINRVEVLDKGFRVLNILEKKTRLC 488

Query: 896  NDDTKKEYLPIMYDPFLNGPYRGTIKKRFSLSIIT--SIENFKKRVGINRIHSILL---- 735
            ND+TKKEYLP +YDPFL+G YRG +   FS SII   SI+N+ + + IN+I+ ILL    
Sbjct: 489  NDETKKEYLPKIYDPFLSGLYRGKVHFFFSPSIINEISIKNYIEMLWINKIYLILLISNY 548

Query: 734  ----PYTDSQELI-------NEIITDANDQKIRKKYIGIK-EISKKTPRWSYKLITELEQ 591
                P  D ++ I       N II D+ ++KI KK   IK EISK+ PRWSYKLI +LEQ
Sbjct: 549  QEFEPKMDEEDRIRILKFVFNAIIVDSKNKKITKKSTEIKKEISKQIPRWSYKLIDDLEQ 608

Query: 590  QSGEYQEEVPLYHQIRSRKAKRVVIFTDNKQDTDPNTTN------TETSDRTDELALIRY 429
            Q GE +E     H+IRSRKAKRVVIFTDN+++ D NT N      T   D+T E+ALIRY
Sbjct: 609  QEGENEENAAEDHEIRSRKAKRVVIFTDNQENPDSNTYNNSKTKDTTNFDQTGEVALIRY 668

Query: 428  SQQSDFRRGIIKGSMRAQRRKITIWELFQANVHSPLFLDRIKKSSPFSFDIFELMKPLFR 249
            SQQSDFRR IIKGSMR QRRKI I +LFQAN+HSPLFLDRI+K   F+FD  ELMK +F 
Sbjct: 669  SQQSDFRRDIIKGSMRTQRRKIAILKLFQANLHSPLFLDRIEKFLFFAFDTSELMKIMFI 728

Query: 248  NWLKGGAEVKVG---------------EYAXXXXXXXXXXXXEIVQMEIAEAWDTLPFAQ 114
            NW++  +E  +                E A            E V++EIAE WD++ FAQ
Sbjct: 729  NWMRKKSEFTISDSTYTEEKTKESDKKEKAESKNRREEDKREEKVRIEIAETWDSIIFAQ 788

Query: 113  RIRGYMLITQSILRKYFLLPSLIIAKNIGRILLFQLP 3
             IRG +L+ QSILRKY +LPSLIIAKNI R+LLFQ+P
Sbjct: 789  AIRGCVLVIQSILRKYIILPSLIIAKNIIRMLLFQIP 825