BLASTX nr result
ID: Lithospermum23_contig00031602
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00031602
(229 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 96 1e-21
KYP49747.1 Retrovirus-related Pol polyprotein from transposon TN... 89 5e-21
KYP38863.1 Retrovirus-related Pol polyprotein from transposon TN... 93 1e-20
KYP69994.1 Retrovirus-related Pol polyprotein from transposon TN... 90 2e-19
ADB85275.1 putative retrotransposon protein, partial [Phyllostac... 81 4e-18
ABA99474.1 retrotransposon protein, putative, Ty1-copia subclass... 83 6e-17
AAT44257.1 putative polyprotein [Oryza sativa Japonica Group] 83 6e-17
AAT44282.1 putative polyprotein [Oryza sativa Japonica Group] 83 6e-17
KZV17633.1 hypothetical protein F511_19996 [Dorcoceras hygrometr... 79 7e-17
CAJ86192.1 H0306F03.15 [Oryza sativa Indica Group] 82 1e-16
CAJ86151.1 H0413E07.4 [Oryza sativa Indica Group] 82 1e-16
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 82 1e-16
AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-clas... 82 2e-16
KYP57305.1 Retrovirus-related Pol polyprotein from transposon TN... 81 3e-16
AAM08562.1 Putative retroelement [Oryza sativa Japonica Group] A... 81 4e-16
AAP53216.2 retrotransposon protein, putative, Ty1-copia subclass... 81 4e-16
XP_015866800.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 79 1e-15
AAM91886.1 putative polyprotein [Oryza sativa Japonica Group] 79 1e-15
AAP54315.2 retrotransposon protein, putative, Ty1-copia subclass... 79 1e-15
ABA98804.1 retrotransposon protein, putative, Ty1-copia subclass... 79 2e-15
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 96.3 bits (238), Expect = 1e-21
Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 29/104 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W-----------------------------RLDDMLIAT 135
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 938 KKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAA 997
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K+DIQ LKGLLSAEFE+KDLG A+KIL +EI R R ++KLFL
Sbjct: 998 KKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFL 1041
>KYP49747.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 141
Score = 89.0 bits (219), Expect = 5e-21
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 29/104 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W-----------------------------RLDDMLIAT 135
+KSLYGLKQSPRQWYKRFDT +DD+LI
Sbjct: 37 QKSLYGLKQSPRQWYKRFDTFMINTGFNKSPYDRCFYHNKVEGGSMIYLLLYVDDILIVA 96
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
K +IQNLK LLS EF++K+LG AK+IL +EI+R +SQKKLFL
Sbjct: 97 KNKSEIQNLKALLSGEFDMKNLGAAKRILGMEIYRDKSQKKLFL 140
>KYP38863.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 390
Score = 92.8 bits (229), Expect = 1e-20
Identities = 54/104 (51%), Positives = 63/104 (60%), Gaps = 29/104 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W-----------------------------RLDDMLIAT 135
+KSLYGLKQSPRQWYKRFDT +DD+LIA
Sbjct: 20 QKSLYGLKQSPRQWYKRFDTFMISKGFNKSPYDCCVYHKKVEDGFMIYLLLYVDDILIAA 79
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
K +IQNLK LLS EF++K+LG AKKIL +EI+R RSQKKLFL
Sbjct: 80 KNKSEIQNLKALLSGEFDMKNLGAAKKILGMEIYRDRSQKKLFL 123
>KYP69994.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 510
Score = 90.1 bits (222), Expect = 2e-19
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 29/103 (28%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W-----------------------------RLDDMLIAT 135
+KSLYGLKQSPRQWYKRFDT +DD+LIA
Sbjct: 136 QKSLYGLKQSPRQWYKRFDTFMINKGFNKSPYDCCVYHKKVEDGSMIYLLLYVDDILIAA 195
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLF 6
K +IQNLK LLS EF++K+LG AK+IL +EI+R RSQKKLF
Sbjct: 196 KNKSEIQNLKALLSGEFDMKNLGAAKRILGMEIYRDRSQKKLF 238
>ADB85275.1 putative retrotransposon protein, partial [Phyllostachys edulis]
Length = 128
Score = 81.3 bits (199), Expect = 4e-18
Identities = 49/103 (47%), Positives = 57/103 (55%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 26 KKSLYGLKQSPRQWYKRFDSFMLSHDFKRSDYDSCVYLKTVNGSAIYLLLYVDDMLIAAK 85
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K ++ LK LS EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 86 DKSELAKLKAQLSNEFEMKDLGAAKKILGMEIIRERQSGKLYL 128
>ABA99474.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 83.2 bits (204), Expect = 6e-17
Identities = 50/103 (48%), Positives = 59/103 (57%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 705 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLKVVDGSAIYLLLYVDDMLIAAK 764
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I+ LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 765 DKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYL 807
>AAT44257.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 83.2 bits (204), Expect = 6e-17
Identities = 50/103 (48%), Positives = 59/103 (57%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W----------------------------RLDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 842 KKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLKVVDGSSIYLLLYVDDMLIAAK 901
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I+ LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 902 DKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYL 944
>AAT44282.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 83.2 bits (204), Expect = 6e-17
Identities = 50/103 (48%), Positives = 59/103 (57%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 935 KKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLKVVDGSVIYLLLYVDDMLIAAK 994
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I+ LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 995 DKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYL 1037
>KZV17633.1 hypothetical protein F511_19996 [Dorcoceras hygrometricum]
Length = 177
Score = 79.3 bits (194), Expect = 7e-17
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 29/104 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*------------W-----------------RLDDMLIAT 135
K+SLYGLKQ+PRQWYKRFD W +DDML+A
Sbjct: 23 KRSLYGLKQAPRQWYKRFDDFIIHQNFTRSNYDWCVYTKVFSDGSRMYLLLYVDDMLLAC 82
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+ +IQ LK LS+EF++KDLG AKKIL +EI R RSQ++LFL
Sbjct: 83 KDPREIQILKKQLSSEFDMKDLGPAKKILGMEIVRNRSQQELFL 126
>CAJ86192.1 H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 82.4 bits (202), Expect = 1e-16
Identities = 50/103 (48%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 721 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAK 780
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 781 DKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSDKLYL 823
>CAJ86151.1 H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 82.4 bits (202), Expect = 1e-16
Identities = 50/103 (48%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 889 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAK 948
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 949 DKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSDKLYL 991
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 82.0 bits (201), Expect = 1e-16
Identities = 50/103 (48%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 872 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAK 931
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 932 DKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYL 974
>AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA91548.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 2340
Score = 81.6 bits (200), Expect = 2e-16
Identities = 50/103 (48%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 1170 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAK 1229
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 1230 DKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYL 1272
>KYP57305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 81.3 bits (199), Expect = 3e-16
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 29/104 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W-----------------------------RLDDMLIAT 135
KKSLYGLKQSPRQWYKRFD +DDMLIA
Sbjct: 340 KKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAA 399
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
K DI LK +LS+EFE+KDLG AKKIL +EI+R R+ L++
Sbjct: 400 KSKTDIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYV 443
>AAM08562.1 Putative retroelement [Oryza sativa Japonica Group] AAM10749.1
Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 80.9 bits (198), Expect = 4e-16
Identities = 49/103 (47%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ ++DMLIA
Sbjct: 899 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVNDMLIAAK 958
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 959 DKLEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERRSGKLYL 1001
>AAP53216.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 80.9 bits (198), Expect = 4e-16
Identities = 49/103 (47%), Positives = 58/103 (56%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ ++DMLIA
Sbjct: 936 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVNDMLIAAK 995
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EFE+KDLG AKKIL +EI R R KL+L
Sbjct: 996 DKLEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERRSGKLYL 1038
>XP_015866800.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC107404367, partial [Ziziphus jujuba]
Length = 807
Score = 79.3 bits (194), Expect = 1e-15
Identities = 50/104 (48%), Positives = 55/104 (52%), Gaps = 29/104 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*W-----------------------------RLDDMLIAT 135
K+SLYGLKQSP QWYKRFD +DDMLI
Sbjct: 31 KRSLYGLKQSPHQWYKRFDGFMFSHGYSRSQYDSCVYFRKLEDGSFIYLLLYVDDMLIVA 90
Query: 134 VEKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K DI LK LS EFE+KDLG AKKIL +EI R RS KLFL
Sbjct: 91 KKKSDINRLKAELSGEFEMKDLGAAKKILGMEIERDRSAGKLFL 134
>AAM91886.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 79.3 bits (194), Expect = 1e-15
Identities = 49/103 (47%), Positives = 57/103 (55%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 998 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAK 1057
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EF +KDLG AKKIL +EI R R KL+L
Sbjct: 1058 DKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHSGKLYL 1100
>AAP54315.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 79.3 bits (194), Expect = 1e-15
Identities = 49/103 (47%), Positives = 57/103 (55%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
KKSLYGLKQSPRQWYKRFD+ +DDMLIA
Sbjct: 998 KKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAK 1057
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
+K +I LK LS+EF +KDLG AKKIL +EI R R KL+L
Sbjct: 1058 DKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHSGKLYL 1100
>ABA98804.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 79.0 bits (193), Expect = 2e-15
Identities = 49/103 (47%), Positives = 57/103 (55%), Gaps = 28/103 (27%)
Frame = -3
Query: 227 KKSLYGLKQSPRQWYKRFDT*WR----------------------------LDDMLIATV 132
K+SLYGLKQSPRQW KRFD+ +DDMLIA
Sbjct: 964 KRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIYLLLYVDDMLIAAK 1023
Query: 131 EKFDIQNLKGLLSAEFEIKDLGVAKKILVIEIFRGRSQKKLFL 3
K +I LK LLS+EF++KDLG AKKILV+EI R R LFL
Sbjct: 1024 SKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFL 1066